Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C659
  Reference Plasmid   NZ_CP042421.1
  Reference Plasmid Size   46945
  Reference Plasmid GC Content   0.35
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0170401 CEHOGGFC_00002 719 4 Gut 1.00 protein_coding missense_variant MODERATE 455C>T Thr152Met
M0170402 CEHOGGFC_00002 744 4 Gut 1.00 protein_coding synonymous_variant LOW 480T>C Val160Val
M0170403 CEHOGGFC_00002 773 4 Gut 1.00 protein_coding missense_variant MODERATE 509T>C Leu170Ser
M0170404 CEHOGGFC_00002 1041 4 Gut 1.00 protein_coding synonymous_variant LOW 777C>T Asn259Asn
M0170405 CEHOGGFC_00002 1077 4 Gut 1.00 protein_coding synonymous_variant LOW 813G>A Gln271Gln
M0170406 CEHOGGFC_00002 1137 4 Gut 1.00 protein_coding missense_variant MODERATE 873G>C Leu291Phe
M0170407 CEHOGGFC_00002 1147 4 Gut 1.00 protein_coding synonymous_variant LOW 883T>C Leu295Leu
M0170408 CEHOGGFC_00002 1179 4 Gut 1.00 protein_coding synonymous_variant LOW 915G>A Leu305Leu
M0170409 CEHOGGFC_00002 1188 4 Gut 1.00 protein_coding synonymous_variant LOW 924A>G Lys308Lys
M0170410 CEHOGGFC_00002 1206 4 Gut 1.00 protein_coding missense_variant MODERATE 942T>G Asp314Glu
M0170411 CEHOGGFC_00003 1505 4 Gut 1.00 protein_coding missense_variant MODERATE 31G>T Ala11Ser
M0170412 CEHOGGFC_00003 1516 4 Gut 1.00 protein_coding synonymous_variant LOW 42T>G Ala14Ala
M0170413 CEHOGGFC_00003 1525 4 Gut 1.00 protein_coding synonymous_variant LOW 51A>C Thr17Thr
M0170414 CEHOGGFC_00003 1537 4 Gut 1.00 protein_coding synonymous_variant LOW 63C>T Asn21Asn
M0170415 CEHOGGFC_00003 1549 4 Gut 1.00 protein_coding synonymous_variant LOW 75A>G Leu25Leu
M0170416 CEHOGGFC_00003 1558 4 Gut 1.00 protein_coding synonymous_variant LOW 84T>C Ile28Ile
M0170417 CEHOGGFC_00003 1585 4 Gut 1.00 protein_coding synonymous_variant LOW 111G>C Val37Val
M0170418 CEHOGGFC_00004 1959 4 Gut 1.00 protein_coding synonymous_variant LOW 180G>T Val60Val
M0170419 CEHOGGFC_00004 2154 4 Gut 1.00 protein_coding synonymous_variant LOW 375C>T Ala125Ala
M0170420 CEHOGGFC_00004 2247 4 Gut 1.00 protein_coding synonymous_variant LOW 468T>C Asp156Asp
M0170421 CEHOGGFC_00004 2373 4 Gut 1.00 protein_coding synonymous_variant LOW 594G>T Ala198Ala
M0170422 CEHOGGFC_00004 2376 4 Gut 1.00 protein_coding synonymous_variant LOW 597A>G Thr199Thr
M0170423 CEHOGGFC_00004 2428 4 Gut 1.00 protein_coding missense_variant MODERATE 649A>C Asn217His
M0170424 CEHOGGFC_00004 2461 4 Gut 1.00 protein_coding missense_variant MODERATE 682C>G Gln228Glu
M0170425 CEHOGGFC_00004 2538 4 Gut 1.00 protein_coding synonymous_variant LOW 759A>G Pro253Pro
M0170426 CEHOGGFC_00004 2625 4 Gut 1.00 protein_coding synonymous_variant LOW 846A>G Leu282Leu
M0170427 CEHOGGFC_00004 2646 4 Gut 1.00 protein_coding synonymous_variant LOW 867A>G Glu289Glu
M0170428 CEHOGGFC_00004 2653 4 Gut 1.00 protein_coding missense_variant MODERATE 874C>T Leu292Phe
M0170429 CEHOGGFC_00004 2655 4 Gut 1.00 protein_coding synonymous_variant LOW 876T>G Leu292Leu
M0170430 CEHOGGFC_00004 2703 4 Gut 1.00 protein_coding synonymous_variant LOW 924T>C Thr308Thr
M0170431 CEHOGGFC_00005 2759 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -5T>C None
M0170432 CEHOGGFC_00005 2767 4 Gut 1.00 protein_coding missense_variant MODERATE 4G>A Glu2Lys
M0170433 CEHOGGFC_00005 2770 4 Gut 1.00 protein_coding missense_variant MODERATE 7G>A Ala3Thr
M0170434 CEHOGGFC_00005 2833 4 Gut 1.00 protein_coding stop_gained HIGH 70C>T Gln24*
M0170435 CEHOGGFC_00005 2834 4 Gut 1.00 protein_coding missense_variant MODERATE 71A>C Gln24Pro
M0170436 CEHOGGFC_00005 2853 4 Gut 1.00 protein_coding synonymous_variant LOW 90G>A Val30Val
M0170437 CEHOGGFC_00005 2874 4 Gut 1.00 protein_coding synonymous_variant LOW 111T>C Gly37Gly
M0170438 CEHOGGFC_00005 2884 4 Gut 1.00 protein_coding synonymous_variant LOW 121C>T Leu41Leu
M0170439 CEHOGGFC_00005 2910 4 Gut 1.00 protein_coding synonymous_variant LOW 147C>G Gly49Gly
M0170440 CEHOGGFC_00005 2919 4 Gut 1.00 protein_coding synonymous_variant LOW 156T>A Gly52Gly
M0170441 CEHOGGFC_00005 2926 4 Gut 1.00 protein_coding missense_variant MODERATE 163G>A Val55Met
M0170442 CEHOGGFC_00005 2928 4 Gut 1.00 protein_coding synonymous_variant LOW 165G>A Val55Val
M0170443 CEHOGGFC_00005 2931 4 Gut 1.00 protein_coding synonymous_variant LOW 168T>C Val56Val
M0170444 CEHOGGFC_00005 2934 4 Gut 1.00 protein_coding synonymous_variant LOW 171T>C Ser57Ser
M0170445 CEHOGGFC_00006 3118 4 Gut 1.00 protein_coding synonymous_variant LOW 90C>T Ile30Ile
M0170446 CEHOGGFC_00006 3133 4 Gut 1.00 protein_coding synonymous_variant LOW 105A>C Ala35Ala
M0170447 CEHOGGFC_00006 3136 4 Gut 1.00 protein_coding synonymous_variant LOW 108T>C Ile36Ile
M0170448 CEHOGGFC_00006 3319 4 Gut 1.00 protein_coding synonymous_variant LOW 291T>C Ala97Ala
M0170449 CEHOGGFC_00006 3397 4 Gut 1.00 protein_coding synonymous_variant LOW 369T>G Gly123Gly
M0170450 CEHOGGFC_00006 3436 4 Gut 1.00 protein_coding synonymous_variant LOW 408C>T Ile136Ile
M0170451 CEHOGGFC_00006 3449 4 Gut 1.00 protein_coding missense_variant MODERATE 421A>G Lys141Glu
M0170452 CEHOGGFC_00006 3460 4 Gut 1.00 protein_coding synonymous_variant LOW 432C>T Asp144Asp
M0170453 CEHOGGFC_00007 3497 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -24G>A None
M0170454 CEHOGGFC_00007 3635 4 Gut 1.00 protein_coding missense_variant MODERATE 115G>A Glu39Lys
M0170455 CEHOGGFC_00007 3650 4 Gut 1.00 protein_coding missense_variant MODERATE 130G>A Asp44Asn
M0170456 CEHOGGFC_00007 3662 4 Gut 1.00 protein_coding missense_variant MODERATE 142A>G Met48Val
M0170457 CEHOGGFC_00007 3706 4 Gut 1.00 protein_coding synonymous_variant LOW 186A>G Leu62Leu
M0170458 CEHOGGFC_00007 3768 4 Gut 1.00 protein_coding missense_variant MODERATE 248T>C Leu83Ser
M0170459 CEHOGGFC_00007 3890 4 Gut 1.00 protein_coding missense_variant MODERATE 370G>A Ala124Thr
M0170460 CEHOGGFC_00007 4138 4 Gut 1.00 protein_coding synonymous_variant LOW 618G>T Gly206Gly
M0170461 CEHOGGFC_00007 4162 4 Gut 1.00 protein_coding synonymous_variant LOW 642A>G Gly214Gly
M0170462 CEHOGGFC_00007 4332 4 Gut 1.00 protein_coding missense_variant MODERATE 812A>C Glu271Ala
M0170463 CEHOGGFC_00007 4339 4 Gut 1.00 protein_coding missense_variant MODERATE 819G>T Lys273Asn
M0170464 CEHOGGFC_00007 4366 4 Gut 1.00 protein_coding synonymous_variant LOW 846C>A Pro282Pro
M0170465 CEHOGGFC_00007 4398 4 Gut 1.00 protein_coding missense_variant MODERATE 878A>C Lys293Thr
M0170466 CEHOGGFC_00007 4418 4 Gut 1.00 protein_coding missense_variant MODERATE 898A>G Ser300Gly
M0170467 CEHOGGFC_00007 4467 4 Gut 1.00 protein_coding missense_variant MODERATE 947A>C Asp316Ala
M0170468 CEHOGGFC_00007 4534 4 Gut 1.00 protein_coding synonymous_variant LOW 1014C>T Ala338Ala
M0170469 CEHOGGFC_00007 4552 4 Gut 1.00 protein_coding synonymous_variant LOW 1032A>T Ala344Ala
M0170470 CEHOGGFC_00007 4598 4 Gut 1.00 protein_coding missense_variant MODERATE 1078A>G Ile360Val
M0170471 CEHOGGFC_00007 4603 4 Gut 1.00 protein_coding synonymous_variant LOW 1083G>A Leu361Leu
M0170472 CEHOGGFC_00007 4605 4 Gut 1.00 protein_coding missense_variant MODERATE 1085T>C Val362Ala
M0170473 CEHOGGFC_00007 4610 4 Gut 1.00 protein_coding missense_variant MODERATE 1090G>A Val364Ile
M0170474 CEHOGGFC_00007 4611 4 Gut 1.00 protein_coding missense_variant MODERATE 1091T>C Val364Ala
M0170475 CEHOGGFC_00007 4630 4 Gut 1.00 protein_coding synonymous_variant LOW 1110G>A Lys370Lys
M0170476 CEHOGGFC_00008 4653 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -24G>A None
M0170477 CEHOGGFC_00008 4810 4 Gut 1.00 protein_coding missense_variant MODERATE 134G>A Gly45Glu
M0170478 CEHOGGFC_00008 4815 4 Gut 1.00 protein_coding missense_variant MODERATE 139A>G Ser47Gly
M0170479 CEHOGGFC_00008 4978 4 Gut 1.00 protein_coding missense_variant MODERATE 302T>C Leu101Ser
M0170480 CEHOGGFC_00008 5191 4 Gut 1.00 protein_coding missense_variant MODERATE 515A>G Glu172Gly
M0170481 CEHOGGFC_00009 5209 4 Gut 1.00 protein_coding synonymous_variant LOW 12A>G Ala4Ala
M0170482 CEHOGGFC_00009 5222 4 Gut 1.00 protein_coding missense_variant MODERATE 25A>G Ile9Val
M0170483 CEHOGGFC_00009 5245 4 Gut 1.00 protein_coding synonymous_variant LOW 48T>C Asp16Asp
M0170484 CEHOGGFC_00009 5248 4 Gut 1.00 protein_coding synonymous_variant LOW 51T>A Leu17Leu
M0170485 CEHOGGFC_00009 5305 4 Gut 1.00 protein_coding synonymous_variant LOW 108C>T Phe36Phe
M0170486 CEHOGGFC_00009 5383 4 Gut 1.00 protein_coding synonymous_variant LOW 186T>C Val62Val
M0170487 CEHOGGFC_00010 5390 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -61T>C None
M0170488 CEHOGGFC_00010 5399 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -52A>G None
M0170489 CEHOGGFC_00010 5406 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -45C>T None
M0170490 CEHOGGFC_00010 5408 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -43A>T None
M0170491 CEHOGGFC_00010 5480 4 Gut 1.00 protein_coding synonymous_variant LOW 30T>G Val10Val
M0170492 CEHOGGFC_00010 5531 4 Gut 1.00 protein_coding synonymous_variant LOW 81C>T Asn27Asn
M0170493 CEHOGGFC_00010 5564 4 Gut 1.00 protein_coding missense_variant MODERATE 114T>G Asp38Glu
M0170494 CEHOGGFC_00010 5566 4 Gut 1.00 protein_coding missense_variant MODERATE 116A>C Glu39Ala
M0170495 CEHOGGFC_00010 5567 4 Gut 1.00 protein_coding missense_variant MODERATE 117G>C Glu39Asp
M0170496 CEHOGGFC_00010 5570 4 Gut 1.00 protein_coding synonymous_variant LOW 120C>T Gly40Gly
M0170497 CEHOGGFC_00010 5574 4 Gut 1.00 protein_coding missense_variant MODERATE 124G>T Ala42Ser
M0170498 CEHOGGFC_00010 5576 4 Gut 1.00 protein_coding synonymous_variant LOW 126G>C Ala42Ala
M0170499 CEHOGGFC_00010 5598 4 Gut 1.00 protein_coding synonymous_variant LOW 148C>T Leu50Leu
M0170500 CEHOGGFC_00010 5612 4 Gut 1.00 protein_coding synonymous_variant LOW 162G>T Arg54Arg
M0170501 CEHOGGFC_00010 5615 4 Gut 1.00 protein_coding synonymous_variant LOW 165C>T Leu55Leu
M0170502 CEHOGGFC_00010 5693 4 Gut 1.00 protein_coding synonymous_variant LOW 243C>G Pro81Pro
M0170503 CEHOGGFC_00010 5723 4 Gut 1.00 protein_coding synonymous_variant LOW 273T>C Pro91Pro
M0170504 CEHOGGFC_00010 5753 4 Gut 1.00 protein_coding synonymous_variant LOW 303A>C Ala101Ala
M0170505 CEHOGGFC_00010 5756 4 Gut 1.00 protein_coding synonymous_variant LOW 306C>T Ile102Ile
M0170506 CEHOGGFC_00010 5759 4 Gut 1.00 protein_coding synonymous_variant LOW 309T>C Thr103Thr
M0170507 CEHOGGFC_00010 5786 4 Gut 1.00 protein_coding synonymous_variant LOW 336A>G Glu112Glu
M0170508 CEHOGGFC_00010 5789 4 Gut 1.00 protein_coding synonymous_variant LOW 339T>A Arg113Arg
M0170509 CEHOGGFC_00010 5937 4 Gut 1.00 protein_coding missense_variant MODERATE 487G>A Ala163Thr
M0170510 CEHOGGFC_00010 6047 4 Gut 1.00 protein_coding synonymous_variant LOW 597C>A Leu199Leu
M0170511 CEHOGGFC_00010 6459 4 Gut 1.00 protein_coding synonymous_variant LOW 1009T>C Leu337Leu
M0170512 CEHOGGFC_00010 6464 4 Gut 1.00 protein_coding synonymous_variant LOW 1014C>T Val338Val
M0170513 CEHOGGFC_00010 6566 4 Gut 1.00 protein_coding synonymous_variant LOW 1116C>T Ile372Ile
M0170514 CEHOGGFC_00010 6606 4 Gut 1.00 protein_coding missense_variant MODERATE 1156T>G Ser386Ala
M0170515 CEHOGGFC_00010 6656 4 Gut 1.00 protein_coding synonymous_variant LOW 1206C>T Gly402Gly
M0170516 CEHOGGFC_00010 6659 4 Gut 1.00 protein_coding synonymous_variant LOW 1209A>C Ile403Ile
M0170517 CEHOGGFC_00010 6677 4 Gut 1.00 protein_coding synonymous_variant LOW 1227C>G Ala409Ala
M0170518 CEHOGGFC_00010 6686 4 Gut 1.00 protein_coding synonymous_variant LOW 1236A>G Gln412Gln
M0170519 CEHOGGFC_00010 6728 4 Gut 1.00 protein_coding synonymous_variant LOW 1278G>A Ala426Ala
M0170520 CEHOGGFC_00010 6783 4 Gut 1.00 protein_coding missense_variant MODERATE 1333G>A Val445Ile
M0170521 CEHOGGFC_00010 6836 4 Gut 1.00 protein_coding synonymous_variant LOW 1386C>A Thr462Thr
M0170522 CEHOGGFC_00010 7266 4 Gut 1.00 protein_coding missense_variant MODERATE 1816T>G Ser606Ala
M0170523 CEHOGGFC_00010 7289 4 Gut 1.00 protein_coding synonymous_variant LOW 1839A>G Leu613Leu
M0170524 CEHOGGFC_00010 7313 4 Gut 1.00 protein_coding synonymous_variant LOW 1863A>G Gln621Gln
M0170525 CEHOGGFC_00010 7325 4 Gut 1.00 protein_coding missense_variant MODERATE 1875A>T Glu625Asp
M0170526 CEHOGGFC_00010 7328 4 Gut 1.00 protein_coding synonymous_variant LOW 1878C>T Asp626Asp
M0170527 CEHOGGFC_00010 7343 4 Gut 1.00 protein_coding synonymous_variant LOW 1893T>C Ala631Ala
M0170528 CEHOGGFC_00010 7361 4 Gut 1.00 protein_coding synonymous_variant LOW 1911G>A Lys637Lys
M0170529 CEHOGGFC_00010 7364 4 Gut 1.00 protein_coding synonymous_variant LOW 1914T>C Val638Val
M0170530 CEHOGGFC_00010 7373 4 Gut 1.00 protein_coding synonymous_variant LOW 1923C>T Ser641Ser
M0170531 CEHOGGFC_00010 7382 4 Gut 1.00 protein_coding synonymous_variant LOW 1932T>C Ser644Ser
M0170532 CEHOGGFC_00010 7412 4 Gut 1.00 protein_coding synonymous_variant LOW 1962C>A Gly654Gly
M0170533 CEHOGGFC_00010 7423 4 Gut 1.00 protein_coding missense_variant MODERATE 1973A>C Asn658Thr
M0170534 CEHOGGFC_00010 7424 4 Gut 1.00 protein_coding missense_variant MODERATE 1974C>A Asn658Lys
M0170535 CEHOGGFC_00010 7436 4 Gut 1.00 protein_coding synonymous_variant LOW 1986C>T Thr662Thr
M0170536 CEHOGGFC_00010 7451 4 Gut 1.00 protein_coding synonymous_variant LOW 2001C>A Ala667Ala
M0170537 CEHOGGFC_00010 7479 4 Gut 1.00 protein_coding missense_variant MODERATE 2029G>T Ala677Ser
M0170538 CEHOGGFC_00010 7481 4 Gut 1.00 protein_coding synonymous_variant LOW 2031C>G Ala677Ala
M0170539 CEHOGGFC_00010 7483 4 Gut 1.00 protein_coding missense_variant MODERATE 2033A>C Lys678Thr
M0170540 CEHOGGFC_00010 7487 4 Gut 1.00 protein_coding missense_variant MODERATE 2037G>T Gln679His
M0170541 CEHOGGFC_00010 7508 4 Gut 1.00 protein_coding synonymous_variant LOW 2058A>G Val686Val
M0170542 CEHOGGFC_00010 7523 4 Gut 1.00 protein_coding synonymous_variant LOW 2073G>A Val691Val
M0170543 CEHOGGFC_00010 7559 4 Gut 1.00 protein_coding synonymous_variant LOW 2109G>A Ala703Ala
M0170544 CEHOGGFC_00010 7691 4 Gut 1.00 protein_coding synonymous_variant LOW 2241C>A Pro747Pro
M0170545 CEHOGGFC_00010 7733 4 Gut 1.00 protein_coding synonymous_variant LOW 2283T>C Gly761Gly
M0170546 CEHOGGFC_00010 7785 4 Gut 1.00 protein_coding missense_variant MODERATE 2335A>G Ile779Val
M0170547 CEHOGGFC_00010 7826 4 Gut 1.00 protein_coding synonymous_variant LOW 2376T>C Gly792Gly
M0170548 CEHOGGFC_00010 7871 4 Gut 1.00 protein_coding synonymous_variant LOW 2421A>G Arg807Arg
M0170549 CEHOGGFC_00010 7887 4 Gut 1.00 protein_coding missense_variant MODERATE 2437G>A Val813Ile
M0170550 CEHOGGFC_00010 7928 4 Gut 1.00 protein_coding synonymous_variant LOW 2478G>A Thr826Thr
M0170551 CEHOGGFC_00011 8056 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -271A>G None
M0170552 CEHOGGFC_00011 8290 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -37C>A None
M0170553 CEHOGGFC_00011 8370 4 Gut 1.00 protein_coding missense_variant MODERATE 44G>T Cys15Phe
M0170554 CEHOGGFC_00011 8402 4 Gut 1.00 protein_coding missense_variant MODERATE 76C>T Leu26Phe
M0170555 CEHOGGFC_00011 8418 4 Gut 1.00 protein_coding missense_variant MODERATE 92T>C Val31Ala
M0170556 CEHOGGFC_00011 8539 4 Gut 1.00 protein_coding synonymous_variant LOW 213C>A Thr71Thr
M0170557 CEHOGGFC_00011 8557 4 Gut 1.00 protein_coding synonymous_variant LOW 231A>G Lys77Lys
M0170558 CEHOGGFC_00011 8563 4 Gut 1.00 protein_coding synonymous_variant LOW 237C>A Gly79Gly
M0170559 CEHOGGFC_00011 8569 4 Gut 1.00 protein_coding synonymous_variant LOW 243T>G Thr81Thr
M0170560 CEHOGGFC_00011 8575 4 Gut 1.00 protein_coding synonymous_variant LOW 249C>T Thr83Thr
M0170561 CEHOGGFC_00011 8635 4 Gut 1.00 protein_coding synonymous_variant LOW 309A>G Leu103Leu
M0170562 CEHOGGFC_00011 8656 4 Gut 1.00 protein_coding synonymous_variant LOW 330A>G Ser110Ser
M0170563 CEHOGGFC_00011 8668 4 Gut 1.00 protein_coding synonymous_variant LOW 342T>C Gly114Gly
M0170564 CEHOGGFC_00011 8674 4 Gut 1.00 protein_coding synonymous_variant LOW 348T>G Thr116Thr
M0170565 CEHOGGFC_00011 8677 4 Gut 1.00 protein_coding synonymous_variant LOW 351T>C Asp117Asp
M0170566 CEHOGGFC_00011 8695 4 Gut 1.00 protein_coding synonymous_variant LOW 369A>T Gly123Gly
M0170567 CEHOGGFC_00011 8713 4 Gut 1.00 protein_coding synonymous_variant LOW 387C>T Phe129Phe
M0170568 CEHOGGFC_00011 8731 4 Gut 1.00 protein_coding synonymous_variant LOW 405C>T Thr135Thr
M0170569 CEHOGGFC_00011 8767 4 Gut 1.00 protein_coding synonymous_variant LOW 441C>T Ala147Ala
M0170570 CEHOGGFC_00011 8854 4 Gut 1.00 protein_coding synonymous_variant LOW 528T>C Gly176Gly
M0170571 CEHOGGFC_00011 8882 4 Gut 1.00 protein_coding missense_variant MODERATE 556A>G Ile186Val
M0170572 CEHOGGFC_00011 8893 4 Gut 1.00 protein_coding synonymous_variant LOW 567A>G Ala189Ala
M0170573 CEHOGGFC_00011 8898 4 Gut 1.00 protein_coding missense_variant MODERATE 572C>T Thr191Met
M0170574 CEHOGGFC_00011 8944 4 Gut 1.00 protein_coding synonymous_variant LOW 618A>C Arg206Arg
M0170575 CEHOGGFC_00011 8980 4 Gut 1.00 protein_coding synonymous_variant LOW 654A>T Ala218Ala
M0170576 CEHOGGFC_00011 9001 4 Gut 1.00 protein_coding synonymous_variant LOW 675T>C Gly225Gly
M0170577 CEHOGGFC_00011 9008 4 Gut 1.00 protein_coding synonymous_variant LOW 682T>C Leu228Leu
M0170578 CEHOGGFC_00011 9022 4 Gut 1.00 protein_coding synonymous_variant LOW 696C>A Ile232Ile
M0170579 CEHOGGFC_00011 9031 4 Gut 1.00 protein_coding synonymous_variant LOW 705C>T Ala235Ala
M0170580 CEHOGGFC_00011 9049 4 Gut 1.00 protein_coding synonymous_variant LOW 723G>A Ala241Ala
M0170581 CEHOGGFC_00011 9097 4 Gut 1.00 protein_coding synonymous_variant LOW 771T>G Gly257Gly
M0170582 CEHOGGFC_00011 9112 4 Gut 1.00 protein_coding synonymous_variant LOW 786G>C Val262Val
M0170583 CEHOGGFC_00011 9421 4 Gut 1.00 protein_coding synonymous_variant LOW 1095G>A Leu365Leu
M0170584 CEHOGGFC_00011 9436 4 Gut 1.00 protein_coding synonymous_variant LOW 1110A>G Pro370Pro
M0170585 CEHOGGFC_00011 9455 4 Gut 1.00 protein_coding synonymous_variant LOW 1129C>T Leu377Leu
M0170586 CEHOGGFC_00011 9460 4 Gut 1.00 protein_coding synonymous_variant LOW 1134T>C Phe378Phe
M0170587 CEHOGGFC_00011 9481 4 Gut 1.00 protein_coding synonymous_variant LOW 1155C>G Gly385Gly
M0170588 CEHOGGFC_00011 9502 4 Gut 1.00 protein_coding synonymous_variant LOW 1176G>A Thr392Thr
M0170589 CEHOGGFC_00011 9514 4 Gut 1.00 protein_coding synonymous_variant LOW 1188C>T Gly396Gly
M0170590 CEHOGGFC_00011 9532 4 Gut 1.00 protein_coding synonymous_variant LOW 1206G>T Ala402Ala
M0170591 CEHOGGFC_00011 9592 4 Gut 1.00 protein_coding synonymous_variant LOW 1266A>G Ala422Ala
M0170592 CEHOGGFC_00011 9701 4 Gut 1.00 protein_coding synonymous_variant LOW 1375A>C Arg459Arg
M0170593 CEHOGGFC_00011 9778 4 Gut 1.00 protein_coding synonymous_variant LOW 1452T>C Ser484Ser
M0170594 CEHOGGFC_00011 9793 4 Gut 1.00 protein_coding synonymous_variant LOW 1467T>A Ile489Ile
M0170595 CEHOGGFC_00011 9796 4 Gut 1.00 protein_coding synonymous_variant LOW 1470T>C Ser490Ser
M0170596 CEHOGGFC_00011 9806 4 Gut 1.00 protein_coding missense_variant MODERATE 1480C>T Pro494Ser
M0170597 CEHOGGFC_00011 9855 4 Gut 1.00 protein_coding missense_variant MODERATE 1529C>A Thr510Asn
M0170598 CEHOGGFC_00011 9868 4 Gut 1.00 protein_coding missense_variant MODERATE 1542G>T Glu514Asp
M0170599 CEHOGGFC_00011 9891 4 Gut 1.00 protein_coding missense_variant MODERATE 1565C>A Ser522Tyr
M0170600 CEHOGGFC_00011 9925 4 Gut 1.00 protein_coding synonymous_variant LOW 1599G>A Gln533Gln
M0170601 CEHOGGFC_00011 10028 4 Gut 1.00 protein_coding missense_variant MODERATE 1702G>A Ala568Thr
M0170602 CEHOGGFC_00011 10029 4 Gut 1.00 protein_coding missense_variant MODERATE 1703C>A Ala568Glu
M0170603 CEHOGGFC_00011 10031 4 Gut 1.00 protein_coding missense_variant MODERATE 1705G>A Val569Ile
M0170604 CEHOGGFC_00011 10093 4 Gut 1.00 protein_coding synonymous_variant LOW 1767G>T Arg589Arg
M0170605 CEHOGGFC_00011 10104 4 Gut 1.00 protein_coding missense_variant MODERATE 1778A>C Gln593Pro
M0170606 CEHOGGFC_00011 10143 4 Gut 1.00 protein_coding missense_variant MODERATE 1817T>C Val606Ala
M0170607 CEHOGGFC_00011 10144 4 Gut 1.00 protein_coding synonymous_variant LOW 1818G>A Val606Val
M0170608 CEHOGGFC_00011 10188 4 Gut 1.00 protein_coding missense_variant MODERATE 1862A>C Gln621Pro
M0170609 CEHOGGFC_00011 10198 4 Gut 1.00 protein_coding synonymous_variant LOW 1872G>A Gln624Gln
M0170610 CEHOGGFC_00011 10199 4 Gut 1.00 protein_coding missense_variant MODERATE 1873T>C Ser625Pro
M0170611 CEHOGGFC_00011 10222 4 Gut 1.00 protein_coding synonymous_variant LOW 1896G>A Lys632Lys
M0170612 CEHOGGFC_00011 10225 4 Gut 1.00 protein_coding synonymous_variant LOW 1899G>A Val633Val
M0170613 CEHOGGFC_00011 10279 4 Gut 1.00 protein_coding synonymous_variant LOW 1953T>C Ile651Ile
M0170614 CEHOGGFC_00011 10318 4 Gut 1.00 protein_coding synonymous_variant LOW 1992T>A Ile664Ile
M0170615 CEHOGGFC_00011 10356 4 Gut 1.00 protein_coding missense_variant MODERATE 2030C>A Ala677Glu
M0170616 CEHOGGFC_00011 10401 4 Gut 1.00 protein_coding missense_variant MODERATE 2075A>G Asn692Ser
M0170617 CEHOGGFC_00011 10421 4 Gut 1.00 protein_coding missense_variant MODERATE 2095T>C Ser699Pro
M0170618 CEHOGGFC_00012 10436 4 Gut 1.00 protein_coding missense_variant MODERATE 5T>G Phe2Cys
M0170619 CEHOGGFC_00012 10437 4 Gut 1.00 protein_coding synonymous_variant LOW 6T>C Phe2Phe
M0170620 CEHOGGFC_00012 10438 4 Gut 1.00 protein_coding missense_variant MODERATE 7A>T Ile3Leu
M0170621 CEHOGGFC_00012 10515 4 Gut 1.00 protein_coding synonymous_variant LOW 84A>G Pro28Pro
M0170622 CEHOGGFC_00012 10520 4 Gut 1.00 protein_coding missense_variant MODERATE 89A>G Asp30Gly
M0170623 CEHOGGFC_00012 10527 4 Gut 1.00 protein_coding synonymous_variant LOW 96G>A Leu32Leu
M0170624 CEHOGGFC_00012 10535 4 Gut 1.00 protein_coding missense_variant MODERATE 104T>C Val35Ala
M0170625 CEHOGGFC_00012 10572 4 Gut 1.00 protein_coding synonymous_variant LOW 141A>C Ile47Ile
M0170626 CEHOGGFC_00012 10726 4 Gut 1.00 protein_coding missense_variant MODERATE 295A>G Met99Val
M0170627 CEHOGGFC_00012 10746 4 Gut 1.00 protein_coding synonymous_variant LOW 315G>T Val105Val
M0170628 CEHOGGFC_00012 10764 4 Gut 1.00 protein_coding synonymous_variant LOW 333C>G Val111Val
M0170629 CEHOGGFC_00012 10773 4 Gut 1.00 protein_coding synonymous_variant LOW 342T>A Arg114Arg
M0170630 CEHOGGFC_00013 10839 4 Gut 1.00 protein_coding missense_variant MODERATE 50T>G Val17Gly
M0170631 CEHOGGFC_00013 10870 4 Gut 1.00 protein_coding synonymous_variant LOW 81G>A Gly27Gly
M0170632 CEHOGGFC_00013 10879 4 Gut 1.00 protein_coding synonymous_variant LOW 90T>G Gly30Gly
M0170633 CEHOGGFC_00013 10906 4 Gut 1.00 protein_coding synonymous_variant LOW 117T>C Ile39Ile
M0170634 CEHOGGFC_00013 10941 4 Gut 1.00 protein_coding missense_variant MODERATE 152G>A Ser51Asn
M0170635 CEHOGGFC_00013 10952 4 Gut 1.00 protein_coding missense_variant MODERATE 163G>A Ala55Thr
M0170636 CEHOGGFC_00013 10953 4 Gut 1.00 protein_coding missense_variant MODERATE 164C>G Ala55Gly
M0170637 CEHOGGFC_00013 11272 4 Gut 1.00 protein_coding synonymous_variant LOW 483C>T Val161Val
M0170638 CEHOGGFC_00013 11302 4 Gut 1.00 protein_coding synonymous_variant LOW 513T>C Ala171Ala
M0170639 CEHOGGFC_00013 11338 4 Gut 1.00 protein_coding synonymous_variant LOW 549G>A Glu183Glu
M0170640 CEHOGGFC_00013 11349 4 Gut 1.00 protein_coding missense_variant MODERATE 560A>G Lys187Arg
M0170641 CEHOGGFC_00013 11351 4 Gut 1.00 protein_coding missense_variant MODERATE 562G>A Asp188Asn
M0170642 CEHOGGFC_00014 11388 4 Gut 1.00 protein_coding synonymous_variant LOW 21G>A Lys7Lys
M0170643 CEHOGGFC_00014 11491 4 Gut 1.00 protein_coding missense_variant MODERATE 124A>G Thr42Ala
M0170644 CEHOGGFC_00014 11500 4 Gut 1.00 protein_coding missense_variant MODERATE 133A>T Thr45Ser
M0170645 CEHOGGFC_00014 11508 4 Gut 1.00 protein_coding synonymous_variant LOW 141T>C Ile47Ile
M0170646 CEHOGGFC_00014 11575 4 Gut 1.00 protein_coding missense_variant MODERATE 208A>C Lys70Gln
M0170647 CEHOGGFC_00014 11661 4 Gut 1.00 protein_coding synonymous_variant LOW 294G>A Lys98Lys
M0170648 CEHOGGFC_00014 11691 4 Gut 1.00 protein_coding synonymous_variant LOW 324A>G Glu108Glu
M0170649 CEHOGGFC_00014 11715 4 Gut 1.00 protein_coding synonymous_variant LOW 348A>G Lys116Lys
M0170650 CEHOGGFC_00014 11727 4 Gut 1.00 protein_coding synonymous_variant LOW 360G>A Ser120Ser
M0170651 CEHOGGFC_00014 11761 4 Gut 1.00 protein_coding missense_variant MODERATE 394G>A Gly132Ser
M0170652 CEHOGGFC_00014 11786 4 Gut 1.00 protein_coding missense_variant MODERATE 419C>A Thr140Lys
M0170653 CEHOGGFC_00014 11805 4 Gut 1.00 protein_coding synonymous_variant LOW 438G>C Arg146Arg
M0170654 CEHOGGFC_00014 11829 4 Gut 1.00 protein_coding synonymous_variant LOW 462G>A Gly154Gly
M0170655 CEHOGGFC_00014 11841 4 Gut 1.00 protein_coding synonymous_variant LOW 474G>A Ala158Ala
M0170656 CEHOGGFC_00015 11929 4 Gut 1.00 protein_coding missense_variant MODERATE 32C>T Ala11Val
M0170657 CEHOGGFC_00015 11939 4 Gut 1.00 protein_coding synonymous_variant LOW 42A>G Val14Val
M0170658 CEHOGGFC_00015 11972 4 Gut 1.00 protein_coding missense_variant MODERATE 75A>T Gln25His
M0170659 CEHOGGFC_00015 11996 4 Gut 1.00 protein_coding synonymous_variant LOW 99C>T Thr33Thr
M0170660 CEHOGGFC_00015 12000 4 Gut 1.00 protein_coding missense_variant MODERATE 103G>T Ala35Ser
M0170661 CEHOGGFC_00015 12011 4 Gut 1.00 protein_coding synonymous_variant LOW 114A>G Gln38Gln
M0170662 CEHOGGFC_00015 12031 4 Gut 1.00 protein_coding missense_variant MODERATE 134A>G Lys45Arg
M0170663 CEHOGGFC_00015 12035 4 Gut 1.00 protein_coding synonymous_variant LOW 138T>C His46His
M0170664 CEHOGGFC_00015 12043 4 Gut 1.00 protein_coding missense_variant MODERATE 146C>T Ala49Val
M0170665 CEHOGGFC_00015 12046 4 Gut 1.00 protein_coding missense_variant MODERATE 149T>C Ile50Thr
M0170666 CEHOGGFC_00015 12062 4 Gut 1.00 protein_coding missense_variant MODERATE 165G>T Gln55His
M0170667 CEHOGGFC_00015 12077 4 Gut 1.00 protein_coding synonymous_variant LOW 180G>A Gln60Gln
M0170668 CEHOGGFC_00015 12122 4 Gut 1.00 protein_coding missense_variant MODERATE 225T>A His75Gln
M0170669 CEHOGGFC_00015 12131 4 Gut 1.00 protein_coding synonymous_variant LOW 234C>T Phe78Phe
M0170670 CEHOGGFC_00015 12134 4 Gut 1.00 protein_coding missense_variant MODERATE 237A>T Lys79Asn
M0170671 CEHOGGFC_00015 12189 4 Gut 1.00 protein_coding missense_variant MODERATE 292A>G Lys98Glu
M0170672 CEHOGGFC_00015 12195 4 Gut 1.00 protein_coding missense_variant MODERATE 298G>T Ala100Ser
M0170673 CEHOGGFC_00015 12206 4 Gut 1.00 protein_coding synonymous_variant LOW 309C>A Val103Val
M0170674 CEHOGGFC_00015 12207 4 Gut 1.00 protein_coding missense_variant MODERATE 310T>A Ser104Thr
M0170675 CEHOGGFC_00015 12230 4 Gut 1.00 protein_coding synonymous_variant LOW 333C>T Asp111Asp
M0170676 CEHOGGFC_00015 12239 4 Gut 1.00 protein_coding synonymous_variant LOW 342C>T Phe114Phe
M0170677 CEHOGGFC_00015 12279 4 Gut 1.00 protein_coding missense_variant MODERATE 382G>T Gly128Cys
M0170678 CEHOGGFC_00015 12287 4 Gut 1.00 protein_coding synonymous_variant LOW 390A>G Lys130Lys
M0170679 CEHOGGFC_00015 12305 4 Gut 1.00 protein_coding synonymous_variant LOW 408G>T Val136Val
M0170680 CEHOGGFC_00015 12308 4 Gut 1.00 protein_coding synonymous_variant LOW 411A>G Ala137Ala
M0170681 CEHOGGFC_00015 12317 4 Gut 1.00 protein_coding synonymous_variant LOW 420A>T Pro140Pro
M0170682 CEHOGGFC_00015 12320 4 Gut 1.00 protein_coding synonymous_variant LOW 423A>G Lys141Lys
M0170683 CEHOGGFC_00015 12321 4 Gut 1.00 protein_coding missense_variant MODERATE 424A>G Thr142Ala
M0170684 CEHOGGFC_00015 12326 4 Gut 1.00 protein_coding synonymous_variant LOW 429T>C Thr143Thr
M0170685 CEHOGGFC_00015 12344 4 Gut 1.00 protein_coding synonymous_variant LOW 447T>C Ser149Ser
M0170686 CEHOGGFC_00015 12359 4 Gut 1.00 protein_coding synonymous_variant LOW 462T>G Val154Val
M0170687 CEHOGGFC_00015 12473 4 Gut 1.00 protein_coding synonymous_variant LOW 576T>G Gly192Gly
M0170688 CEHOGGFC_00015 12476 4 Gut 1.00 protein_coding synonymous_variant LOW 579A>G Arg193Arg
M0170689 CEHOGGFC_00015 12482 4 Gut 1.00 protein_coding synonymous_variant LOW 585T>C Ala195Ala
M0170690 CEHOGGFC_00016 12572 4 Gut 1.00 protein_coding missense_variant MODERATE 31G>A Val11Met
M0170691 CEHOGGFC_00016 12598 4 Gut 1.00 protein_coding synonymous_variant LOW 57C>T Val19Val
M0170692 CEHOGGFC_00016 12638 4 Gut 1.00 protein_coding missense_variant MODERATE 97G>A Val33Ile
M0170693 CEHOGGFC_00016 12676 4 Gut 1.00 protein_coding missense_variant MODERATE 135T>G Ile45Met
M0170694 CEHOGGFC_00016 12712 4 Gut 1.00 protein_coding synonymous_variant LOW 171T>C Thr57Thr
M0170695 CEHOGGFC_00016 12715 4 Gut 1.00 protein_coding synonymous_variant LOW 174G>C Thr58Thr
M0170696 CEHOGGFC_00016 12718 4 Gut 1.00 protein_coding synonymous_variant LOW 177G>T Thr59Thr
M0170697 CEHOGGFC_00016 12721 4 Gut 1.00 protein_coding synonymous_variant LOW 180A>G Thr60Thr
M0170698 CEHOGGFC_00016 12742 4 Gut 1.00 protein_coding synonymous_variant LOW 201C>T Ser67Ser
M0170699 CEHOGGFC_00016 12770 4 Gut 1.00 protein_coding missense_variant MODERATE 229G>T Ala77Ser
M0170700 CEHOGGFC_00016 12793 4 Gut 1.00 protein_coding synonymous_variant LOW 252C>T Ser84Ser
M0170701 CEHOGGFC_00016 12803 4 Gut 1.00 protein_coding missense_variant MODERATE 262G>A Asp88Asn
M0170702 CEHOGGFC_00016 12856 4 Gut 1.00 protein_coding synonymous_variant LOW 315C>G Ala105Ala
M0170703 CEHOGGFC_00016 12877 4 Gut 1.00 protein_coding synonymous_variant LOW 336T>C Asn112Asn
M0170704 CEHOGGFC_00016 12894 4 Gut 1.00 protein_coding missense_variant MODERATE 353C>T Ala118Val
M0170705 CEHOGGFC_00016 12907 4 Gut 1.00 protein_coding synonymous_variant LOW 366C>T Gly122Gly
M0170706 CEHOGGFC_00016 12909 4 Gut 1.00 protein_coding missense_variant MODERATE 368T>C Phe123Ser
M0170707 CEHOGGFC_00016 13003 4 Gut 1.00 protein_coding synonymous_variant LOW 462C>G Ala154Ala
M0170708 CEHOGGFC_00016 13030 4 Gut 1.00 protein_coding synonymous_variant LOW 489C>T Thr163Thr
M0170709 CEHOGGFC_00016 13084 4 Gut 1.00 protein_coding synonymous_variant LOW 543T>C Ala181Ala
M0170710 CEHOGGFC_00016 13156 4 Gut 1.00 protein_coding synonymous_variant LOW 615A>G Ala205Ala
M0170711 CEHOGGFC_00016 13175 4 Gut 1.00 protein_coding missense_variant MODERATE 634T>C Tyr212His
M0170712 CEHOGGFC_00016 13192 4 Gut 1.00 protein_coding synonymous_variant LOW 651A>G Glu217Glu
M0170713 CEHOGGFC_00016 13219 4 Gut 1.00 protein_coding synonymous_variant LOW 678A>T Ala226Ala
M0170714 CEHOGGFC_00016 13236 4 Gut 1.00 protein_coding missense_variant MODERATE 695A>C Lys232Thr
M0170715 CEHOGGFC_00016 13243 4 Gut 1.00 protein_coding synonymous_variant LOW 702G>A Ala234Ala
M0170716 CEHOGGFC_00016 13245 4 Gut 1.00 protein_coding missense_variant MODERATE 704A>G Asn235Ser
M0170717 CEHOGGFC_00016 13308 4 Gut 1.00 protein_coding missense_variant MODERATE 767C>T Ser256Leu
M0170718 CEHOGGFC_00016 13342 4 Gut 1.00 protein_coding synonymous_variant LOW 801G>C Gly267Gly
M0170719 CEHOGGFC_00016 13343 4 Gut 1.00 protein_coding synonymous_variant LOW 802C>T Leu268Leu
M0170720 CEHOGGFC_00016 13424 4 Gut 1.00 protein_coding missense_variant MODERATE 883C>A Arg295Ser
M0170721 CEHOGGFC_00038 36465 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4489T>C None
M0170722 CEHOGGFC_00045 36601 4 Gut 1.00 protein_coding missense_variant MODERATE 79G>A Ala27Thr
M0170723 CEHOGGFC_00040 37163 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3599G>A None
M0170724 CEHOGGFC_00040 37165 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3601C>T None
M0170725 CEHOGGFC_00040 37171 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3607T>C None
M0170726 CEHOGGFC_00040 37182 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3618C>A None
M0170727 CEHOGGFC_00040 37201 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3637A>C None
M0170728 CEHOGGFC_00040 37281 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3717G>A None
M0170729 CEHOGGFC_00040 37283 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3719C>T None
M0170730 CEHOGGFC_00040 37294 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3730T>A None
M0170731 CEHOGGFC_00040 37591 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4027G>T None
M0170732 CEHOGGFC_00040 37660 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4096A>T None
M0170733 CEHOGGFC_00040 37661 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4097T>C None
M0170734 CEHOGGFC_00048 40528 4 Gut 1.00 protein_coding synonymous_variant LOW 528T>C Phe176Phe
M0170735 CEHOGGFC_00046 42000 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -3923C>T None
M0170736 CEHOGGFC_00050 42134 4 Gut 1.00 protein_coding synonymous_variant LOW 558A>G Gln186Gln
M0170737 CEHOGGFC_00050 42137 4 Gut 1.00 protein_coding synonymous_variant LOW 555A>G Lys185Lys
M0170738 CEHOGGFC_00050 42167 4 Gut 1.00 protein_coding synonymous_variant LOW 525A>G Leu175Leu
M0170739 CEHOGGFC_00050 42198 4 Gut 1.00 protein_coding missense_variant MODERATE 494A>G Glu165Gly
M0170740 CEHOGGFC_00050 42278 4 Gut 1.00 protein_coding synonymous_variant LOW 414C>T Gly138Gly
M0170741 CEHOGGFC_00050 42310 4 Gut 1.00 protein_coding missense_variant MODERATE 382T>A Phe128Ile
M0170742 CEHOGGFC_00050 42314 4 Gut 1.00 protein_coding synonymous_variant LOW 378C>T Asp126Asp
M0170743 CEHOGGFC_00050 42519 4 Gut 1.00 protein_coding missense_variant MODERATE 173A>C Glu58Ala
M0170744 CEHOGGFC_00051 42869 4 Gut 1.00 protein_coding synonymous_variant LOW 189T>G Leu63Leu
M0170745 CEHOGGFC_00047 43123 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4243G>A None
M0170746 CEHOGGFC_00047 43158 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4278C>T None
M0170747 CEHOGGFC_00052 43198 4 Gut 1.00 protein_coding missense_variant MODERATE 113G>A Arg38His
M0170748 CEHOGGFC_00052 43211 4 Gut 1.00 protein_coding missense_variant MODERATE 100C>A Gln34Lys
M0170749 CEHOGGFC_00053 43829 4 Gut 1.00 protein_coding missense_variant MODERATE 13T>C Ser5Pro
M0170750 CEHOGGFC_00053 43958 4 Gut 1.00 protein_coding stop_lost&splice_region_variant HIGH 142T>G Ter48Gluext*?
M0170751 CEHOGGFC_00050 44164 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -1473T>C None
M0170752 CEHOGGFC_00055 44333 4 Gut 1.00 protein_coding synonymous_variant LOW 102G>T Ser34Ser
M0170753 CEHOGGFC_00056 45034 4 Gut 1.00 protein_coding missense_variant MODERATE 74T>C Val25Ala
M0170754 CEHOGGFC_00050 45440 4 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -2749C>T None
M0170755 CEHOGGFC_00057 45630 4 Gut 1.00 protein_coding missense_variant MODERATE 152G>A Gly51Asp
M0170756 CEHOGGFC_00057 45769 4 Gut 1.00 protein_coding synonymous_variant LOW 291C>T Asn97Asn
M0170757 CEHOGGFC_00057 46345 4 Gut 1.00 protein_coding synonymous_variant LOW 867A>G Ala289Ala






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group
CEHOGGFC_00035 Mercury (Hg) 99 2e-53 1 104 0.8387 0.8000 prediction






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
CEHOGGFC_00007 9.A.39.1.6 92.2 7.7e-160 1 374 1.0000 1.0000 9 Incompletely Characterized Transport Systems 9.A Recognized transporters of unknown biochemical mechanism 9.A.39 The Gram-positive Bacterial Hemoglobin Receptor (Isd) Family