Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C686
  Reference Plasmid   NZ_CP047236.1
  Reference Plasmid Size   162832
  Reference Plasmid GC Content   0.65
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0098210 FGEMHNDG_00067 62743 5 Skin 1.00 protein_coding missense_variant MODERATE 1201A>C Met401Leu
M0098211 FGEMHNDG_00067 62769 5 Skin 1.00 protein_coding synonymous_variant LOW 1227C>T Ser409Ser
M0098212 FGEMHNDG_00067 62773 5 Skin 1.00 protein_coding missense_variant MODERATE 1231T>G Ser411Ala
M0098213 FGEMHNDG_00067 62793 5 Skin 1.00 protein_coding synonymous_variant LOW 1251A>G Gln417Gln
M0098214 FGEMHNDG_00067 62800 5 Skin 1.00 protein_coding missense_variant MODERATE 1258T>A Ser420Thr
M0098215 FGEMHNDG_00067 62802 5 Skin 1.00 protein_coding synonymous_variant LOW 1260C>A Ser420Ser
M0098216 FGEMHNDG_00063 62828 5 Skin 1.00 protein_coding upstream_gene_variant MODIFIER -4673C>T None
M0098217 FGEMHNDG_00063 62882 5 Skin 1.00 protein_coding upstream_gene_variant MODIFIER -4727G>A None
M0098218 FGEMHNDG_00068 63004 5 Skin 1.00 protein_coding synonymous_variant LOW 90G>A Val30Val
M0098219 FGEMHNDG_00068 63007 5 Skin 1.00 protein_coding synonymous_variant LOW 93C>T Thr31Thr
M0098220 FGEMHNDG_00068 63016 5 Skin 1.00 protein_coding missense_variant MODERATE 102G>C Glu34Asp
M0098221 FGEMHNDG_00068 63036 5 Skin 1.00 protein_coding missense_variant MODERATE 122A>G Gln41Arg
M0098222 FGEMHNDG_00068 63049 5 Skin 1.00 protein_coding synonymous_variant LOW 135C>T Ser45Ser
M0098223 FGEMHNDG_00064 63165 5 Skin 1.00 protein_coding upstream_gene_variant MODIFIER -3730G>A None
M0098224 FGEMHNDG_00064 63166 5 Skin 1.00 protein_coding upstream_gene_variant MODIFIER -3731A>G None
M0098225 FGEMHNDG_00069 63433 5 Skin 1.00 protein_coding synonymous_variant LOW 219A>G Gly73Gly
M0098226 FGEMHNDG_00069 63455 5 Skin 1.00 protein_coding missense_variant MODERATE 241C>T Pro81Ser
M0098227 FGEMHNDG_00069 63461 5 Skin 1.00 protein_coding missense_variant MODERATE 247A>G Met83Val
M0098228 FGEMHNDG_00069 63466 5 Skin 1.00 protein_coding synonymous_variant LOW 252A>G Gln84Gln
M0098229 FGEMHNDG_00069 63469 4 Skin 0.80 protein_coding synonymous_variant LOW 255A>T Ala85Ala
M0098230 FGEMHNDG_00069 63472 4 Skin 0.80 protein_coding synonymous_variant LOW 258G>A Pro86Pro
M0098231 FGEMHNDG_00069 63473 4 Skin 0.80 protein_coding synonymous_variant LOW 259C>T Leu87Leu
M0098232 FGEMHNDG_00069 63493 4 Skin 0.80 protein_coding synonymous_variant LOW 279C>T Asp93Asp
M0098233 FGEMHNDG_00069 63503 4 Skin 0.80 protein_coding missense_variant MODERATE 289G>A Ala97Thr
M0098234 FGEMHNDG_00069 63664 5 Skin 1.00 protein_coding synonymous_variant LOW 450T>C Tyr150Tyr
M0098235 FGEMHNDG_00069 63795 4 Skin 0.80 protein_coding missense_variant MODERATE 581G>A Gly194Glu
M0098236 FGEMHNDG_00069 63822 4 Skin 0.80 protein_coding missense_variant MODERATE 608T>C Val203Ala
M0098237 FGEMHNDG_00069 63868 4 Skin 0.80 protein_coding synonymous_variant LOW 654C>T Val218Val
M0098238 FGEMHNDG_00069 63922 4 Skin 0.80 protein_coding synonymous_variant LOW 708G>A Gln236Gln
M0098239 FGEMHNDG_00069 63925 4 Skin 0.80 protein_coding synonymous_variant LOW 711T>C Gly237Gly
M0098240 FGEMHNDG_00064 58226 3 Skin 0.60 protein_coding missense_variant MODERATE 1210A>C Lys404Gln
M0098241 FGEMHNDG_00064 58247 3 Skin 0.60 protein_coding missense_variant MODERATE 1189T>C Cys397Arg
M0098242 FGEMHNDG_00064 58274 3 Skin 0.60 protein_coding missense_variant MODERATE 1162C>T Pro388Ser
M0098243 FGEMHNDG_00064 58314 3 Skin 0.60 protein_coding synonymous_variant LOW 1122A>C Thr374Thr
M0098244 FGEMHNDG_00064 58317 3 Skin 0.60 protein_coding synonymous_variant LOW 1119A>C Thr373Thr
M0098245 FGEMHNDG_00064 58518 3 Skin 0.60 protein_coding synonymous_variant LOW 918G>T Gly306Gly
M0098246 FGEMHNDG_00064 58695 3 Skin 0.60 protein_coding synonymous_variant LOW 741G>A Leu247Leu
M0098247 FGEMHNDG_00064 58706 3 Skin 0.60 protein_coding missense_variant MODERATE 730G>A Glu244Lys
M0098248 FGEMHNDG_00064 58805 3 Skin 0.60 protein_coding missense_variant MODERATE 631A>G Thr211Ala
M0098249 FGEMHNDG_00064 58836 3 Skin 0.60 protein_coding synonymous_variant LOW 600C>T Arg200Arg
M0098250 FGEMHNDG_00064 58872 3 Skin 0.60 protein_coding synonymous_variant LOW 564C>T Phe188Phe
M0098251 FGEMHNDG_00064 58962 3 Skin 0.60 protein_coding synonymous_variant LOW 474C>T Leu158Leu
M0098252 FGEMHNDG_00064 58983 3 Skin 0.60 protein_coding synonymous_variant LOW 453C>T Arg151Arg
M0098253 FGEMHNDG_00064 59028 3 Skin 0.60 protein_coding synonymous_variant LOW 408C>T Ala136Ala
M0098254 FGEMHNDG_00064 59124 3 Skin 0.60 protein_coding synonymous_variant LOW 312C>T Ser104Ser
M0098255 FGEMHNDG_00065 59436 3 Skin 0.60 protein_coding missense_variant MODERATE 724C>G His242Asp
M0098256 FGEMHNDG_00065 59441 3 Skin 0.60 protein_coding missense_variant MODERATE 719A>C Asp240Ala
M0098257 FGEMHNDG_00065 59521 3 Skin 0.60 protein_coding synonymous_variant LOW 639C>T Gly213Gly
M0098258 FGEMHNDG_00065 59539 3 Skin 0.60 protein_coding synonymous_variant LOW 621C>T Ser207Ser
M0098259 FGEMHNDG_00065 59583 3 Skin 0.60 protein_coding missense_variant MODERATE 577A>G Asn193Asp
M0098260 FGEMHNDG_00065 59697 3 Skin 0.60 protein_coding missense_variant MODERATE 463C>G Gln155Glu
M0098261 FGEMHNDG_00065 59935 4 Skin 0.80 protein_coding synonymous_variant LOW 225A>G Leu75Leu
M0098262 FGEMHNDG_00060 60242 4 Skin 0.80 protein_coding upstream_gene_variant MODIFIER -3217C>T None
M0098263 FGEMHNDG_00069 63598 3 Skin 0.60 protein_coding synonymous_variant LOW 384T>C Thr128Thr
M0098264 FGEMHNDG_00069 63960 3 Skin 0.60 protein_coding missense_variant MODERATE 746C>T Ala249Val
M0098265 FGEMHNDG_00069 63970 3 Skin 0.60 protein_coding synonymous_variant LOW 756T>C Thr252Thr
M0098266 FGEMHNDG_00069 63982 3 Skin 0.60 protein_coding synonymous_variant LOW 768C>A Leu256Leu
M0098267 FGEMHNDG_00069 64058 3 Skin 0.60 protein_coding missense_variant MODERATE 844C>G Gln282Glu
M0098268 FGEMHNDG_00069 64060 3 Skin 0.60 protein_coding missense_variant MODERATE 846G>C Gln282His
M0098269 FGEMHNDG_00069 64072 3 Skin 0.60 protein_coding synonymous_variant LOW 858T>C His286His
M0098270 FGEMHNDG_00069 64093 3 Skin 0.60 protein_coding synonymous_variant LOW 879C>T Asp293Asp
M0098271 FGEMHNDG_00069 64112 3 Skin 0.60 protein_coding missense_variant MODERATE 898G>A Ala300Thr
M0098272 FGEMHNDG_00069 64114 3 Skin 0.60 protein_coding synonymous_variant LOW 900C>A Ala300Ala
M0098273 FGEMHNDG_00064 64186 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -4751G>A None
M0098274 FGEMHNDG_00070 64284 3 Skin 0.60 protein_coding missense_variant MODERATE 64A>G Ile22Val
M0098275 FGEMHNDG_00070 64290 4 Skin 0.80 protein_coding missense_variant MODERATE 70A>C Ile24Leu
M0098276 FGEMHNDG_00070 64883 4 Skin 0.80 protein_coding synonymous_variant LOW 663C>A Val221Val
M0098277 FGEMHNDG_00070 65046 4 Skin 0.80 protein_coding missense_variant MODERATE 826G>A Val276Ile
M0098278 FGEMHNDG_00070 65048 4 Skin 0.80 protein_coding synonymous_variant LOW 828C>T Val276Val
M0098279 FGEMHNDG_00070 65108 4 Skin 0.80 protein_coding synonymous_variant LOW 888T>C Ser296Ser
M0098280 FGEMHNDG_00070 65123 4 Skin 0.80 protein_coding synonymous_variant LOW 903T>C Val301Val
M0098281 FGEMHNDG_00070 65126 4 Skin 0.80 protein_coding synonymous_variant LOW 906C>T Asp302Asp
M0098282 FGEMHNDG_00070 65165 4 Skin 0.80 protein_coding synonymous_variant LOW 945T>C Val315Val
M0098283 FGEMHNDG_00070 65210 4 Skin 0.80 protein_coding synonymous_variant LOW 990A>G Gly330Gly
M0098284 FGEMHNDG_00070 65297 4 Skin 0.80 protein_coding synonymous_variant LOW 1077G>A Lys359Lys
M0098285 FGEMHNDG_00070 65333 4 Skin 0.80 protein_coding synonymous_variant LOW 1113C>T Ser371Ser
M0098286 FGEMHNDG_00070 65355 4 Skin 0.80 protein_coding missense_variant MODERATE 1135A>G Thr379Ala
M0098287 FGEMHNDG_00070 65459 4 Skin 0.80 protein_coding synonymous_variant LOW 1239G>T Ala413Ala
M0098288 FGEMHNDG_00070 65486 4 Skin 0.80 protein_coding synonymous_variant LOW 1266G>T Leu422Leu
M0098289 FGEMHNDG_00070 65546 4 Skin 0.80 protein_coding synonymous_variant LOW 1326C>G Leu442Leu
M0098290 FGEMHNDG_00070 65579 4 Skin 0.80 protein_coding synonymous_variant LOW 1359A>C Leu453Leu
M0098291 FGEMHNDG_00070 65606 4 Skin 0.80 protein_coding synonymous_variant LOW 1386C>A Gly462Gly
M0098292 FGEMHNDG_00070 65636 4 Skin 0.80 protein_coding synonymous_variant LOW 1416C>T Ala472Ala
M0098293 FGEMHNDG_00070 65653 4 Skin 0.80 protein_coding missense_variant MODERATE 1433C>A Ala478Asp
M0098294 FGEMHNDG_00070 65654 4 Skin 0.80 protein_coding synonymous_variant LOW 1434C>A Ala478Ala
M0098295 FGEMHNDG_00070 65684 4 Skin 0.80 protein_coding synonymous_variant LOW 1464A>G Glu488Glu
M0098296 FGEMHNDG_00070 65717 4 Skin 0.80 protein_coding synonymous_variant LOW 1497T>C Ile499Ile
M0098297 FGEMHNDG_00070 65744 4 Skin 0.80 protein_coding synonymous_variant LOW 1524A>G Gly508Gly
M0098298 FGEMHNDG_00070 65746 4 Skin 0.80 protein_coding missense_variant MODERATE 1526A>C Gln509Pro
M0098299 FGEMHNDG_00070 65762 4 Skin 0.80 protein_coding missense_variant MODERATE 1542A>C Glu514Asp
M0098300 FGEMHNDG_00070 65773 4 Skin 0.80 protein_coding missense_variant MODERATE 1553G>A Ser518Asn
M0098301 FGEMHNDG_00070 65798 4 Skin 0.80 protein_coding synonymous_variant LOW 1578C>T Gly526Gly
M0098302 FGEMHNDG_00070 65799 4 Skin 0.80 protein_coding missense_variant MODERATE 1579A>C Thr527Pro
M0098303 FGEMHNDG_00070 65800 4 Skin 0.80 protein_coding missense_variant MODERATE 1580C>T Thr527Met
M0098304 FGEMHNDG_00070 65860 4 Skin 0.80 protein_coding missense_variant MODERATE 1640G>C Gly547Ala
M0098305 FGEMHNDG_00070 65892 4 Skin 0.80 protein_coding missense_variant MODERATE 1672G>A Ala558Thr
M0098306 FGEMHNDG_00070 65900 4 Skin 0.80 protein_coding synonymous_variant LOW 1680T>C Ala560Ala
M0098307 FGEMHNDG_00070 65903 4 Skin 0.80 protein_coding synonymous_variant LOW 1683G>A Glu561Glu
M0098308 FGEMHNDG_00070 65948 4 Skin 0.80 protein_coding synonymous_variant LOW 1728T>C Ala576Ala
M0098309 FGEMHNDG_00070 66089 4 Skin 0.80 protein_coding synonymous_variant LOW 1869G>T Gly623Gly
M0098310 FGEMHNDG_00070 66095 4 Skin 0.80 protein_coding synonymous_variant LOW 1875T>C Asp625Asp
M0098311 FGEMHNDG_00070 66146 4 Skin 0.80 protein_coding synonymous_variant LOW 1926T>C Asp642Asp
M0098312 FGEMHNDG_00070 66148 3 Skin 0.60 protein_coding missense_variant MODERATE 1928T>G Leu643Arg
M0098313 FGEMHNDG_00070 66158 4 Skin 0.80 protein_coding missense_variant MODERATE 1938A>C Glu646Asp
M0098314 FGEMHNDG_00070 66293 4 Skin 0.80 protein_coding synonymous_variant LOW 2073T>C Asp691Asp
M0098315 FGEMHNDG_00070 66311 4 Skin 0.80 protein_coding synonymous_variant LOW 2091T>C Asp697Asp
M0098316 FGEMHNDG_00070 66331 4 Skin 0.80 protein_coding missense_variant MODERATE 2111G>C Ser704Thr
M0098317 FGEMHNDG_00070 66528 4 Skin 0.80 protein_coding missense_variant MODERATE 2308T>C Ser770Pro
M0098318 FGEMHNDG_00070 66535 4 Skin 0.80 protein_coding missense_variant MODERATE 2315C>A Thr772Asn
M0098319 FGEMHNDG_00070 66554 4 Skin 0.80 protein_coding synonymous_variant LOW 2334A>C Pro778Pro
M0098320 FGEMHNDG_00071 67024 4 Skin 0.80 protein_coding synonymous_variant LOW 450T>C His150His
M0098321 FGEMHNDG_00071 67145 4 Skin 0.80 protein_coding synonymous_variant LOW 571T>C Leu191Leu
M0098322 FGEMHNDG_00072 68856 3 Skin 0.60 protein_coding synonymous_variant LOW 123A>G Glu41Glu
M0098323 FGEMHNDG_00072 68859 3 Skin 0.60 protein_coding synonymous_variant LOW 126C>G Gly42Gly
M0098324 FGEMHNDG_00072 68875 3 Skin 0.60 protein_coding missense_variant MODERATE 142C>T His48Tyr
M0098325 FGEMHNDG_00072 68877 3 Skin 0.60 protein_coding synonymous_variant LOW 144C>T His48His
M0098326 FGEMHNDG_00072 68925 3 Skin 0.60 protein_coding synonymous_variant LOW 192C>T Ile64Ile
M0098327 FGEMHNDG_00072 68943 3 Skin 0.60 protein_coding synonymous_variant LOW 210A>G Ala70Ala
M0098328 FGEMHNDG_00072 68964 3 Skin 0.60 protein_coding synonymous_variant LOW 231C>T Gly77Gly
M0098329 FGEMHNDG_00072 68979 3 Skin 0.60 protein_coding synonymous_variant LOW 246C>T His82His
M0098330 FGEMHNDG_00072 68991 3 Skin 0.60 protein_coding synonymous_variant LOW 258C>T Cys86Cys
M0098331 FGEMHNDG_00072 69010 3 Skin 0.60 protein_coding missense_variant MODERATE 277T>G Ser93Ala
M0098332 FGEMHNDG_00072 69018 3 Skin 0.60 protein_coding synonymous_variant LOW 285C>G Gly95Gly
M0098333 FGEMHNDG_00072 69027 3 Skin 0.60 protein_coding synonymous_variant LOW 294A>G Ala98Ala
M0098334 FGEMHNDG_00074 69090 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1219A>G None
M0098335 FGEMHNDG_00074 69100 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1209C>T None
M0098336 FGEMHNDG_00073 69114 3 Skin 0.60 protein_coding missense_variant MODERATE 926G>C Arg309Pro
M0098337 FGEMHNDG_00073 69161 3 Skin 0.60 protein_coding synonymous_variant LOW 879C>A Ala293Ala
M0098338 FGEMHNDG_00073 69182 3 Skin 0.60 protein_coding synonymous_variant LOW 858C>T Val286Val
M0098339 FGEMHNDG_00073 69191 3 Skin 0.60 protein_coding synonymous_variant LOW 849T>C Arg283Arg
M0098340 FGEMHNDG_00073 69290 3 Skin 0.60 protein_coding synonymous_variant LOW 750G>A Thr250Thr
M0098341 FGEMHNDG_00073 69911 3 Skin 0.60 protein_coding synonymous_variant LOW 129A>G Ser43Ser
M0098342 FGEMHNDG_00073 70288 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -249A>G None
M0098343 FGEMHNDG_00074 70326 3 Skin 0.60 protein_coding synonymous_variant LOW 18C>G Thr6Thr
M0098344 FGEMHNDG_00074 70614 3 Skin 0.60 protein_coding synonymous_variant LOW 306C>T Pro102Pro
M0098345 FGEMHNDG_00074 70642 3 Skin 0.60 protein_coding missense_variant MODERATE 334A>G Lys112Glu
M0098346 FGEMHNDG_00074 70674 3 Skin 0.60 protein_coding synonymous_variant LOW 366G>A Gly122Gly
M0098347 FGEMHNDG_00074 70704 3 Skin 0.60 protein_coding synonymous_variant LOW 396A>G Ala132Ala
M0098348 FGEMHNDG_00074 70914 3 Skin 0.60 protein_coding synonymous_variant LOW 606C>T Asp202Asp
M0098349 FGEMHNDG_00074 70920 3 Skin 0.60 protein_coding synonymous_variant LOW 612A>G Glu204Glu
M0098350 FGEMHNDG_00074 70923 3 Skin 0.60 protein_coding synonymous_variant LOW 615T>C Ser205Ser
M0098351 FGEMHNDG_00073 70973 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -934G>A None
M0098352 FGEMHNDG_00075 71020 3 Skin 0.60 protein_coding missense_variant MODERATE 922G>T Ala308Ser
M0098353 FGEMHNDG_00075 71051 3 Skin 0.60 protein_coding synonymous_variant LOW 891A>G Val297Val
M0098354 FGEMHNDG_00075 71081 3 Skin 0.60 protein_coding synonymous_variant LOW 861C>T Ala287Ala
M0098355 FGEMHNDG_00075 71099 3 Skin 0.60 protein_coding synonymous_variant LOW 843G>A Arg281Arg
M0098356 FGEMHNDG_00075 71137 3 Skin 0.60 protein_coding synonymous_variant LOW 805C>T Leu269Leu
M0098357 FGEMHNDG_00075 71141 3 Skin 0.60 protein_coding synonymous_variant LOW 801G>T Pro267Pro
M0098358 FGEMHNDG_00075 71150 3 Skin 0.60 protein_coding synonymous_variant LOW 792C>G Ser264Ser
M0098359 FGEMHNDG_00075 71192 3 Skin 0.60 protein_coding synonymous_variant LOW 750G>A Val250Val
M0098360 FGEMHNDG_00075 71195 3 Skin 0.60 protein_coding synonymous_variant LOW 747C>T Pro249Pro
M0098361 FGEMHNDG_00075 71198 3 Skin 0.60 protein_coding synonymous_variant LOW 744G>A Gly248Gly
M0098362 FGEMHNDG_00075 71258 3 Skin 0.60 protein_coding synonymous_variant LOW 684C>G Ala228Ala
M0098363 FGEMHNDG_00075 71333 3 Skin 0.60 protein_coding synonymous_variant LOW 609T>C Phe203Phe
M0098364 FGEMHNDG_00075 71393 3 Skin 0.60 protein_coding synonymous_variant LOW 549G>A Ala183Ala
M0098365 FGEMHNDG_00075 71405 3 Skin 0.60 protein_coding synonymous_variant LOW 537C>T Ala179Ala
M0098366 FGEMHNDG_00075 71447 3 Skin 0.60 protein_coding synonymous_variant LOW 495A>G Leu165Leu
M0098367 FGEMHNDG_00075 71453 3 Skin 0.60 protein_coding synonymous_variant LOW 489T>C Thr163Thr
M0098368 FGEMHNDG_00075 71465 3 Skin 0.60 protein_coding synonymous_variant LOW 477C>T Ile159Ile
M0098369 FGEMHNDG_00075 71468 3 Skin 0.60 protein_coding synonymous_variant LOW 474G>C Gly158Gly
M0098370 FGEMHNDG_00075 71480 3 Skin 0.60 protein_coding synonymous_variant LOW 462T>C Gly154Gly
M0098371 FGEMHNDG_00075 71528 3 Skin 0.60 protein_coding synonymous_variant LOW 414C>T Asp138Asp
M0098372 FGEMHNDG_00075 71573 3 Skin 0.60 protein_coding synonymous_variant LOW 369G>T Leu123Leu
M0098373 FGEMHNDG_00075 71649 3 Skin 0.60 protein_coding missense_variant MODERATE 293G>T Gly98Val
M0098374 FGEMHNDG_00075 71675 3 Skin 0.60 protein_coding synonymous_variant LOW 267C>T Ser89Ser
M0098375 FGEMHNDG_00075 71684 3 Skin 0.60 protein_coding synonymous_variant LOW 258G>A Glu86Glu
M0098376 FGEMHNDG_00075 71738 3 Skin 0.60 protein_coding synonymous_variant LOW 204C>T Ser68Ser
M0098377 FGEMHNDG_00075 71762 3 Skin 0.60 protein_coding synonymous_variant LOW 180C>T Gly60Gly
M0098378 FGEMHNDG_00075 71803 3 Skin 0.60 protein_coding missense_variant MODERATE 139A>T Met47Leu
M0098379 FGEMHNDG_00075 71873 3 Skin 0.60 protein_coding synonymous_variant LOW 69T>C Val23Val
M0098380 FGEMHNDG_00075 71893 3 Skin 0.60 protein_coding synonymous_variant LOW 49T>C Leu17Leu
M0098381 FGEMHNDG_00075 71909 3 Skin 0.60 protein_coding synonymous_variant LOW 33G>A Ala11Ala
M0098382 FGEMHNDG_00073 71987 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1948T>A None
M0098383 FGEMHNDG_00073 72004 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1965T>C None
M0098384 FGEMHNDG_00073 72010 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1971G>A None
M0098385 FGEMHNDG_00073 72025 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1986T>C None
M0098386 FGEMHNDG_00073 72026 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1987G>A None
M0098387 FGEMHNDG_00073 72029 3 Skin 0.60 protein_coding upstream_gene_variant MODIFIER -1990T>C None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
FGEMHNDG_00147 QHD88469.1|GH23 100 0 1 674 1 1
FGEMHNDG_00162 CAE09163.1|CE5 96 0 1 549 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term