Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C697
  Reference Plasmid   NZ_CP048628.1
  Reference Plasmid Size   46189
  Reference Plasmid GC Content   0.29
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0172779 EOFHMPKM_00028 17302 6 Gut 0.16 protein_coding synonymous_variant LOW 516T>C Tyr172Tyr
M0172780 EOFHMPKM_00028 17419 6 Gut 0.16 protein_coding synonymous_variant LOW 633A>G Lys211Lys
M0172781 EOFHMPKM_00028 17497 6 Gut 0.16 protein_coding synonymous_variant LOW 711A>G Arg237Arg
M0172782 EOFHMPKM_00028 17533 6 Gut 0.16 protein_coding synonymous_variant LOW 747C>T Pro249Pro
M0172783 EOFHMPKM_00028 17554 6 Gut 0.16 protein_coding synonymous_variant LOW 768C>T Val256Val
M0172784 EOFHMPKM_00028 17566 6 Gut 0.16 protein_coding synonymous_variant LOW 780T>A Ile260Ile
M0172785 EOFHMPKM_00028 17569 6 Gut 0.16 protein_coding synonymous_variant LOW 783G>A Pro261Pro
M0172786 EOFHMPKM_00028 17572 6 Gut 0.16 protein_coding synonymous_variant LOW 786G>T Thr262Thr
M0172787 EOFHMPKM_00028 17576 6 Gut 0.16 protein_coding missense_variant MODERATE 790C>T Leu264Phe
M0172788 EOFHMPKM_00028 17578 6 Gut 0.16 protein_coding synonymous_variant LOW 792T>A Leu264Leu
M0172789 EOFHMPKM_00028 17596 5 Gut 0.14 protein_coding synonymous_variant LOW 810A>T Ser270Ser
M0172790 EOFHMPKM_00028 17602 5 Gut 0.14 protein_coding synonymous_variant LOW 816T>C Ile272Ile
M0172791 EOFHMPKM_00028 17611 6 Gut 0.16 protein_coding synonymous_variant LOW 825C>T Asp275Asp
M0172792 EOFHMPKM_00028 17617 6 Gut 0.16 protein_coding synonymous_variant LOW 831A>G Lys277Lys
M0172793 EOFHMPKM_00028 18088 7 Gut 0.19 protein_coding synonymous_variant LOW 1302A>G Lys434Lys
M0172794 EOFHMPKM_00028 18658 3 Gut 0.08 protein_coding synonymous_variant LOW 1872C>T Phe624Phe
M0172795 EOFHMPKM_00028 18673 6 Gut 0.16 protein_coding synonymous_variant LOW 1887G>A Gly629Gly
M0172796 EOFHMPKM_00028 18679 6 Gut 0.16 protein_coding synonymous_variant LOW 1893G>A Pro631Pro
M0172797 EOFHMPKM_00028 18688 6 Gut 0.16 protein_coding synonymous_variant LOW 1902C>T Asn634Asn
M0172798 EOFHMPKM_00028 18691 6 Gut 0.16 protein_coding synonymous_variant LOW 1905G>T Gly635Gly
M0172799 EOFHMPKM_00028 18700 7 Gut 0.19 protein_coding synonymous_variant LOW 1914A>G Gly638Gly
M0172800 EOFHMPKM_00028 18715 6 Gut 0.16 protein_coding synonymous_variant LOW 1929A>C Ile643Ile
M0172801 EOFHMPKM_00028 18718 5 Gut 0.14 protein_coding synonymous_variant LOW 1932A>G Leu644Leu
M0172802 EOFHMPKM_00028 18827 7 Gut 0.19 protein_coding missense_variant MODERATE 2041T>A Cys681Ser
M0172803 EOFHMPKM_00028 18832 7 Gut 0.19 protein_coding synonymous_variant LOW 2046A>T Gly682Gly
M0172804 EOFHMPKM_00028 18909 7 Gut 0.19 protein_coding missense_variant MODERATE 2123A>G Glu708Gly
M0172805 EOFHMPKM_00028 18947 7 Gut 0.19 protein_coding missense_variant MODERATE 2161G>A Val721Ile
M0172806 EOFHMPKM_00028 18998 7 Gut 0.19 protein_coding synonymous_variant LOW 2212C>T Leu738Leu
M0172807 EOFHMPKM_00028 19067 7 Gut 0.19 protein_coding missense_variant MODERATE 2281A>G Arg761Gly
M0172808 EOFHMPKM_00028 19071 7 Gut 0.19 protein_coding missense_variant MODERATE 2285T>C Val762Ala
M0172809 EOFHMPKM_00029 19126 7 Gut 0.19 protein_coding upstream_gene_variant MODIFIER -4C>T None
M0172810 EOFHMPKM_00029 19162 6 Gut 0.16 protein_coding synonymous_variant LOW 33C>T Arg11Arg
M0172811 EOFHMPKM_00029 19181 6 Gut 0.16 protein_coding missense_variant MODERATE 52G>C Glu18Gln
M0172812 EOFHMPKM_00029 19201 6 Gut 0.16 protein_coding synonymous_variant LOW 72A>G Leu24Leu
M0172813 EOFHMPKM_00030 19610 5 Gut 0.14 protein_coding synonymous_variant LOW 72A>C Ile24Ile
M0172814 EOFHMPKM_00030 19641 8 Gut 0.22 protein_coding missense_variant MODERATE 103A>G Ile35Val
M0172815 EOFHMPKM_00030 19911 8 Gut 0.22 protein_coding missense_variant MODERATE 373A>G Asn125Asp
M0172816 EOFHMPKM_00030 20072 9 Gut 0.24 protein_coding synonymous_variant LOW 534G>A Pro178Pro
M0172817 EOFHMPKM_00030 20088 9 Gut 0.24 protein_coding missense_variant MODERATE 550A>G Thr184Ala
M0172818 EOFHMPKM_00030 20090 9 Gut 0.24 protein_coding synonymous_variant LOW 552G>A Thr184Thr
M0172819 EOFHMPKM_00030 20105 9 Gut 0.24 protein_coding synonymous_variant LOW 567T>G Pro189Pro
M0172820 EOFHMPKM_00030 20126 9 Gut 0.24 protein_coding synonymous_variant LOW 588C>A Thr196Thr
M0172821 EOFHMPKM_00030 20159 9 Gut 0.24 protein_coding synonymous_variant LOW 621G>A Arg207Arg
M0172822 EOFHMPKM_00030 20168 9 Gut 0.24 protein_coding synonymous_variant LOW 630G>T Ala210Ala
M0172823 EOFHMPKM_00030 20174 7 Gut 0.19 protein_coding synonymous_variant LOW 636T>C Cys212Cys
M0172824 EOFHMPKM_00030 20207 9 Gut 0.24 protein_coding synonymous_variant LOW 669G>A Gly223Gly
M0172825 EOFHMPKM_00030 20258 7 Gut 0.19 protein_coding synonymous_variant LOW 720A>G Gly240Gly
M0172826 EOFHMPKM_00030 20279 9 Gut 0.24 protein_coding synonymous_variant LOW 741C>A Thr247Thr
M0172827 EOFHMPKM_00030 20288 9 Gut 0.24 protein_coding synonymous_variant LOW 750T>C Ala250Ala
M0172828 EOFHMPKM_00030 20294 9 Gut 0.24 protein_coding synonymous_variant LOW 756C>T Asp252Asp
M0172829 EOFHMPKM_00030 20363 9 Gut 0.24 protein_coding synonymous_variant LOW 825G>A Lys275Lys
M0172830 EOFHMPKM_00030 20375 9 Gut 0.24 protein_coding synonymous_variant LOW 837A>G Gly279Gly
M0172831 EOFHMPKM_00030 20435 9 Gut 0.24 protein_coding synonymous_variant LOW 897T>C Ser299Ser
M0172832 EOFHMPKM_00030 20498 9 Gut 0.24 protein_coding synonymous_variant LOW 960A>G Leu320Leu
M0172833 EOFHMPKM_00030 20508 9 Gut 0.24 protein_coding missense_variant MODERATE 970G>A Glu324Lys
M0172834 EOFHMPKM_00030 20521 9 Gut 0.24 protein_coding missense_variant MODERATE 983C>T Thr328Ile
M0172835 EOFHMPKM_00031 20547 9 Gut 0.24 protein_coding missense_variant MODERATE 26A>G Asn9Ser
M0172836 EOFHMPKM_00031 20554 9 Gut 0.24 protein_coding synonymous_variant LOW 33C>A Thr11Thr
M0172837 EOFHMPKM_00031 20562 9 Gut 0.24 protein_coding missense_variant MODERATE 41C>G Ala14Gly
M0172838 EOFHMPKM_00031 20564 9 Gut 0.24 protein_coding missense_variant MODERATE 43A>G Ile15Val
M0172839 EOFHMPKM_00031 20565 9 Gut 0.24 protein_coding missense_variant MODERATE 44T>C Ile15Thr
M0172840 EOFHMPKM_00031 20633 9 Gut 0.24 protein_coding missense_variant MODERATE 112G>A Ala38Thr
M0172841 EOFHMPKM_00031 20695 9 Gut 0.24 protein_coding synonymous_variant LOW 174C>T Asp58Asp
M0172842 EOFHMPKM_00031 20728 9 Gut 0.24 protein_coding synonymous_variant LOW 207T>C Ser69Ser
M0172843 EOFHMPKM_00031 20755 9 Gut 0.24 protein_coding synonymous_variant LOW 234C>T Leu78Leu
M0172844 EOFHMPKM_00031 20875 9 Gut 0.24 protein_coding synonymous_variant LOW 354T>C Phe118Phe
M0172845 EOFHMPKM_00032 21138 9 Gut 0.24 protein_coding synonymous_variant LOW 198A>G Gln66Gln
M0172846 EOFHMPKM_00032 21147 9 Gut 0.24 protein_coding synonymous_variant LOW 207C>G Pro69Pro
M0172847 EOFHMPKM_00033 21359 4 Gut 0.11 protein_coding synonymous_variant LOW 147A>G Leu49Leu
M0172848 EOFHMPKM_00033 21422 8 Gut 0.22 protein_coding synonymous_variant LOW 210C>T Tyr70Tyr
M0172849 EOFHMPKM_00033 21440 4 Gut 0.11 protein_coding synonymous_variant LOW 228C>T Asn76Asn
M0172850 EOFHMPKM_00033 21455 9 Gut 0.24 protein_coding synonymous_variant LOW 243C>T Leu81Leu
M0172851 EOFHMPKM_00033 21512 9 Gut 0.24 protein_coding synonymous_variant LOW 300A>G Glu100Glu
M0172852 EOFHMPKM_00033 21665 9 Gut 0.24 protein_coding synonymous_variant LOW 453T>C Ile151Ile
M0172853 EOFHMPKM_00033 21674 9 Gut 0.24 protein_coding synonymous_variant LOW 462C>T Ala154Ala
M0172854 EOFHMPKM_00033 22055 6 Gut 0.16 protein_coding synonymous_variant LOW 843C>T Cys281Cys
M0172855 EOFHMPKM_00033 22124 5 Gut 0.14 protein_coding synonymous_variant LOW 912T>C Gly304Gly
M0172856 EOFHMPKM_00033 22178 5 Gut 0.14 protein_coding synonymous_variant LOW 966C>T Val322Val
M0172857 EOFHMPKM_00033 22295 5 Gut 0.14 protein_coding synonymous_variant LOW 1083G>A Lys361Lys
M0172858 EOFHMPKM_00033 23354 9 Gut 0.24 protein_coding synonymous_variant LOW 2142T>C Asn714Asn
M0172859 EOFHMPKM_00033 23414 4 Gut 0.11 protein_coding synonymous_variant LOW 2202C>T Leu734Leu
M0172860 EOFHMPKM_00033 23652 7 Gut 0.19 protein_coding missense_variant MODERATE 2440A>G Thr814Ala
M0172861 EOFHMPKM_00033 23669 10 Gut 0.27 protein_coding synonymous_variant LOW 2457C>T Asp819Asp
M0172862 EOFHMPKM_00034 23727 6 Gut 0.16 protein_coding synonymous_variant LOW 24T>C Ile8Ile
M0172863 EOFHMPKM_00031 20644 5 Gut 0.14 protein_coding synonymous_variant LOW 123T>C His41His
M0172864 EOFHMPKM_00033 23241 4 Gut 0.11 protein_coding synonymous_variant LOW 2029T>C Leu677Leu
M0172865 EOFHMPKM_00028 17761 3 Gut 0.08 protein_coding synonymous_variant LOW 975C>T Ser325Ser
M0172866 EOFHMPKM_00028 17767 3 Gut 0.08 protein_coding synonymous_variant LOW 981C>T Ser327Ser
M0172867 EOFHMPKM_00028 17774 3 Gut 0.08 protein_coding synonymous_variant LOW 988C>T Leu330Leu
M0172868 EOFHMPKM_00028 17779 3 Gut 0.08 protein_coding synonymous_variant LOW 993C>T Gly331Gly
M0172869 EOFHMPKM_00026 15001 3 Gut 0.08 protein_coding synonymous_variant LOW 330T>C Asn110Asn
M0172870 EOFHMPKM_00026 15005 3 Gut 0.08 protein_coding missense_variant MODERATE 334G>A Asp112Asn
M0172871 EOFHMPKM_00026 15007 3 Gut 0.08 protein_coding synonymous_variant LOW 336T>C Asp112Asp
M0172872 EOFHMPKM_00026 15029 4 Gut 0.11 protein_coding missense_variant MODERATE 358A>G Ile120Val
M0172873 EOFHMPKM_00026 15061 4 Gut 0.11 protein_coding synonymous_variant LOW 390C>T Val130Val
M0172874 EOFHMPKM_00026 15087 4 Gut 0.11 protein_coding missense_variant MODERATE 416T>C Val139Ala
M0172875 EOFHMPKM_00026 15100 4 Gut 0.11 protein_coding synonymous_variant LOW 429A>G Lys143Lys
M0172876 EOFHMPKM_00026 15101 4 Gut 0.11 protein_coding missense_variant MODERATE 430A>G Thr144Ala
M0172877 EOFHMPKM_00026 15122 4 Gut 0.11 protein_coding missense_variant MODERATE 451A>G Lys151Glu
M0172878 EOFHMPKM_00026 15175 4 Gut 0.11 protein_coding synonymous_variant LOW 504C>T Asn168Asn
M0172879 EOFHMPKM_00026 15409 5 Gut 0.14 protein_coding synonymous_variant LOW 738A>G Arg246Arg
M0172880 EOFHMPKM_00026 15424 5 Gut 0.14 protein_coding synonymous_variant LOW 753A>T Ala251Ala
M0172881 EOFHMPKM_00026 15430 5 Gut 0.14 protein_coding synonymous_variant LOW 759T>G Leu253Leu
M0172882 EOFHMPKM_00026 15484 6 Gut 0.16 protein_coding synonymous_variant LOW 813G>A Lys271Lys
M0172883 EOFHMPKM_00027 15522 6 Gut 0.16 protein_coding synonymous_variant LOW 36T>C His12His
M0172884 EOFHMPKM_00027 15568 6 Gut 0.16 protein_coding missense_variant MODERATE 82T>C Ser28Pro
M0172885 EOFHMPKM_00027 15580 6 Gut 0.16 protein_coding missense_variant MODERATE 94A>G Met32Val
M0172886 EOFHMPKM_00027 15593 6 Gut 0.16 protein_coding missense_variant MODERATE 107A>G Asn36Ser
M0172887 EOFHMPKM_00027 15733 6 Gut 0.16 protein_coding missense_variant MODERATE 247A>G Asn83Asp
M0172888 EOFHMPKM_00027 15754 6 Gut 0.16 protein_coding missense_variant MODERATE 268G>A Gly90Ser
M0172889 EOFHMPKM_00027 15764 6 Gut 0.16 protein_coding missense_variant MODERATE 278T>C Val93Ala
M0172890 EOFHMPKM_00027 15897 6 Gut 0.16 protein_coding synonymous_variant LOW 411G>A Val137Val
M0172891 EOFHMPKM_00027 15942 6 Gut 0.16 protein_coding synonymous_variant LOW 456G>A Gly152Gly
M0172892 EOFHMPKM_00027 16006 6 Gut 0.16 protein_coding missense_variant MODERATE 520A>G Ile174Val
M0172893 EOFHMPKM_00027 16011 6 Gut 0.16 protein_coding synonymous_variant LOW 525C>T Asn175Asn
M0172894 EOFHMPKM_00027 16031 6 Gut 0.16 protein_coding missense_variant MODERATE 545A>G Gln182Arg
M0172895 EOFHMPKM_00027 16035 6 Gut 0.16 protein_coding synonymous_variant LOW 549A>G Lys183Lys
M0172896 EOFHMPKM_00027 16037 6 Gut 0.16 protein_coding missense_variant MODERATE 551T>C Val184Ala
M0172897 EOFHMPKM_00027 16108 7 Gut 0.19 protein_coding missense_variant MODERATE 622A>G Ile208Val
M0172898 EOFHMPKM_00027 16123 7 Gut 0.19 protein_coding missense_variant MODERATE 637C>T Pro213Ser
M0172899 EOFHMPKM_00027 16136 7 Gut 0.19 protein_coding missense_variant MODERATE 650T>C Val217Ala
M0172900 EOFHMPKM_00027 16142 7 Gut 0.19 protein_coding missense_variant MODERATE 656G>A Ser219Asn
M0172901 EOFHMPKM_00027 16143 7 Gut 0.19 protein_coding synonymous_variant LOW 657C>T Ser219Ser
M0172902 EOFHMPKM_00027 16158 7 Gut 0.19 protein_coding synonymous_variant LOW 672T>G Ala224Ala
M0172903 EOFHMPKM_00027 16207 7 Gut 0.19 protein_coding missense_variant MODERATE 721A>G Asn241Asp
M0172904 EOFHMPKM_00027 16230 7 Gut 0.19 protein_coding synonymous_variant LOW 744A>G Leu248Leu
M0172905 EOFHMPKM_00027 16288 7 Gut 0.19 protein_coding missense_variant MODERATE 802T>G Cys268Gly
M0172906 EOFHMPKM_00027 16293 7 Gut 0.19 protein_coding synonymous_variant LOW 807T>C Gly269Gly
M0172907 EOFHMPKM_00027 16545 7 Gut 0.19 protein_coding synonymous_variant LOW 1059C>T Ala353Ala
M0172908 EOFHMPKM_00027 16575 7 Gut 0.19 protein_coding synonymous_variant LOW 1089A>G Leu363Leu
M0172909 EOFHMPKM_00027 16590 7 Gut 0.19 protein_coding synonymous_variant LOW 1104A>G Gln368Gln
M0172910 EOFHMPKM_00027 16603 7 Gut 0.19 protein_coding missense_variant MODERATE 1117A>G Asn373Asp
M0172911 EOFHMPKM_00027 16611 7 Gut 0.19 protein_coding synonymous_variant LOW 1125A>G Ser375Ser
M0172912 EOFHMPKM_00027 16641 7 Gut 0.19 protein_coding synonymous_variant LOW 1155G>A Glu385Glu
M0172913 EOFHMPKM_00027 16648 7 Gut 0.19 protein_coding missense_variant MODERATE 1162A>G Ser388Gly
M0172914 EOFHMPKM_00027 16649 7 Gut 0.19 protein_coding missense_variant MODERATE 1163G>C Ser388Thr
M0172915 EOFHMPKM_00027 16671 3 Gut 0.08 protein_coding synonymous_variant LOW 1185C>T Leu395Leu
M0172916 EOFHMPKM_00027 16692 4 Gut 0.11 protein_coding synonymous_variant LOW 1206T>A Val402Val
M0172917 EOFHMPKM_00028 16797 7 Gut 0.19 protein_coding missense_variant MODERATE 11A>G Lys4Arg
M0172918 EOFHMPKM_00029 19310 3 Gut 0.08 protein_coding missense_variant MODERATE 181A>G Thr61Ala
M0172919 EOFHMPKM_00029 19312 3 Gut 0.08 protein_coding synonymous_variant LOW 183A>G Thr61Thr
M0172920 EOFHMPKM_00029 19346 3 Gut 0.08 protein_coding missense_variant MODERATE 217A>G Ile73Val
M0172921 EOFHMPKM_00029 19376 3 Gut 0.08 protein_coding missense_variant MODERATE 247A>G Asn83Asp
M0172922 EOFHMPKM_00030 19634 3 Gut 0.08 protein_coding synonymous_variant LOW 96T>C Asp32Asp
M0172923 EOFHMPKM_00030 19661 3 Gut 0.08 protein_coding synonymous_variant LOW 123A>G Lys41Lys
M0172924 EOFHMPKM_00030 19676 3 Gut 0.08 protein_coding synonymous_variant LOW 138G>A Lys46Lys
M0172925 EOFHMPKM_00030 19680 3 Gut 0.08 protein_coding missense_variant MODERATE 142A>G Asn48Asp
M0172926 EOFHMPKM_00033 23687 3 Gut 0.08 protein_coding synonymous_variant LOW 2475G>A Thr825Thr
M0172927 EOFHMPKM_00034 23736 3 Gut 0.08 protein_coding synonymous_variant LOW 33C>T Ala11Ala
M0172928 EOFHMPKM_00034 24135 3 Gut 0.08 protein_coding synonymous_variant LOW 432T>A Ser144Ser
M0172929 EOFHMPKM_00034 24240 3 Gut 0.08 protein_coding synonymous_variant LOW 537A>T Ala179Ala
M0172930 EOFHMPKM_00034 24243 3 Gut 0.08 protein_coding synonymous_variant LOW 540T>C Asn180Asn
M0172931 EOFHMPKM_00034 24267 3 Gut 0.08 protein_coding synonymous_variant LOW 564C>T Asn188Asn
M0172932 EOFHMPKM_00034 24270 3 Gut 0.08 protein_coding synonymous_variant LOW 567A>T Ile189Ile
M0172933 EOFHMPKM_00034 24291 3 Gut 0.08 protein_coding synonymous_variant LOW 588C>A Ile196Ile
M0172934 EOFHMPKM_00034 24342 3 Gut 0.08 protein_coding synonymous_variant LOW 639A>G Leu213Leu
M0172935 EOFHMPKM_00034 24393 3 Gut 0.08 protein_coding missense_variant MODERATE 690A>T Glu230Asp
M0172936 EOFHMPKM_00034 24435 3 Gut 0.08 protein_coding synonymous_variant LOW 732A>G Val244Val
M0172937 EOFHMPKM_00035 24619 3 Gut 0.08 protein_coding synonymous_variant LOW 132C>T Cys44Cys
M0172938 EOFHMPKM_00035 24661 3 Gut 0.08 protein_coding synonymous_variant LOW 174C>T Phe58Phe
M0172939 EOFHMPKM_00035 24664 3 Gut 0.08 protein_coding synonymous_variant LOW 177T>A Val59Val
M0172940 EOFHMPKM_00035 24674 3 Gut 0.08 protein_coding missense_variant MODERATE 187A>G Thr63Ala
M0172941 EOFHMPKM_00035 24675 3 Gut 0.08 protein_coding missense_variant MODERATE 188C>T Thr63Ile
M0172942 EOFHMPKM_00035 24814 3 Gut 0.08 protein_coding synonymous_variant LOW 327C>T Ser109Ser
M0172943 EOFHMPKM_00035 24874 3 Gut 0.08 protein_coding synonymous_variant LOW 387G>A Thr129Thr
M0172944 EOFHMPKM_00035 24883 3 Gut 0.08 protein_coding synonymous_variant LOW 396G>A Thr132Thr
M0172945 EOFHMPKM_00035 25420 5 Gut 0.14 protein_coding synonymous_variant LOW 933T>C Ala311Ala
M0172946 EOFHMPKM_00035 25456 5 Gut 0.14 protein_coding synonymous_variant LOW 969G>A Gln323Gln
M0172947 EOFHMPKM_00035 25470 5 Gut 0.14 protein_coding missense_variant MODERATE 983C>T Ala328Val
M0172948 EOFHMPKM_00035 25474 5 Gut 0.14 protein_coding synonymous_variant LOW 987A>C Gly329Gly
M0172949 EOFHMPKM_00035 25486 4 Gut 0.11 protein_coding synonymous_variant LOW 999A>G Lys333Lys
M0172950 EOFHMPKM_00035 25532 4 Gut 0.11 protein_coding synonymous_variant LOW 1045C>T Leu349Leu
M0172951 EOFHMPKM_00035 25591 3 Gut 0.08 protein_coding synonymous_variant LOW 1104T>A Ser368Ser
M0172952 EOFHMPKM_00035 25597 5 Gut 0.14 protein_coding synonymous_variant LOW 1110G>A Glu370Glu
M0172953 EOFHMPKM_00036 25612 3 Gut 0.08 protein_coding missense_variant MODERATE 14G>T Arg5Leu
M0172954 EOFHMPKM_00035 25626 3 Gut 0.08 protein_coding missense_variant MODERATE 1139A>T Asn380Ile
M0172955 EOFHMPKM_00036 26179 5 Gut 0.14 protein_coding missense_variant MODERATE 581C>T Thr194Met
M0172956 EOFHMPKM_00036 26192 5 Gut 0.14 protein_coding synonymous_variant LOW 594C>T Gly198Gly
M0172957 EOFHMPKM_00036 26213 5 Gut 0.14 protein_coding synonymous_variant LOW 615T>G Leu205Leu
M0172958 EOFHMPKM_00036 26218 5 Gut 0.14 protein_coding missense_variant MODERATE 620A>C Glu207Ala
M0172959 EOFHMPKM_00036 26219 5 Gut 0.14 protein_coding synonymous_variant LOW 621A>G Glu207Glu
M0172960 EOFHMPKM_00036 26221 5 Gut 0.14 protein_coding missense_variant MODERATE 623A>G Asn208Ser
M0172961 EOFHMPKM_00036 26228 5 Gut 0.14 protein_coding synonymous_variant LOW 630A>G Gln210Gln
M0172962 EOFHMPKM_00036 26238 5 Gut 0.14 protein_coding missense_variant MODERATE 640C>A Gln214Lys
M0172963 EOFHMPKM_00036 26240 5 Gut 0.14 protein_coding synonymous_variant LOW 642A>G Gln214Gln
M0172964 EOFHMPKM_00036 26246 5 Gut 0.14 protein_coding synonymous_variant LOW 648T>G Val216Val
M0172965 EOFHMPKM_00036 26385 4 Gut 0.11 protein_coding missense_variant MODERATE 787G>A Val263Ile
M0172966 EOFHMPKM_00036 26412 5 Gut 0.14 protein_coding missense_variant MODERATE 814G>A Val272Ile
M0172967 EOFHMPKM_00036 26474 5 Gut 0.14 protein_coding synonymous_variant LOW 876T>A Ser292Ser
M0172968 EOFHMPKM_00036 26492 5 Gut 0.14 protein_coding synonymous_variant LOW 894C>T Asn298Asn
M0172969 EOFHMPKM_00036 26495 5 Gut 0.14 protein_coding synonymous_variant LOW 897G>T Pro299Pro
M0172970 EOFHMPKM_00030 19658 4 Gut 0.11 protein_coding synonymous_variant LOW 120T>C His40His
M0172971 EOFHMPKM_00027 16557 5 Gut 0.14 protein_coding synonymous_variant LOW 1071T>A Ala357Ala
M0172972 EOFHMPKM_00027 16674 5 Gut 0.14 protein_coding synonymous_variant LOW 1188C>T Arg396Arg
M0172973 EOFHMPKM_00027 16785 5 Gut 0.14 protein_coding synonymous_variant LOW 1299C>T Tyr433Tyr
M0172974 EOFHMPKM_00007 5536 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -2574T>G None
M0172975 EOFHMPKM_00013 5641 6 Gut 0.16 protein_coding synonymous_variant LOW 81C>T Asp27Asp
M0172976 EOFHMPKM_00013 5654 6 Gut 0.16 protein_coding synonymous_variant LOW 94C>T Leu32Leu
M0172977 EOFHMPKM_00013 5659 6 Gut 0.16 protein_coding synonymous_variant LOW 99A>C Gly33Gly
M0172978 EOFHMPKM_00013 5662 6 Gut 0.16 protein_coding synonymous_variant LOW 102T>C Ile34Ile
M0172979 EOFHMPKM_00013 5671 6 Gut 0.16 protein_coding synonymous_variant LOW 111A>T Ser37Ser
M0172980 EOFHMPKM_00013 5770 6 Gut 0.16 protein_coding synonymous_variant LOW 210A>T Thr70Thr
M0172981 EOFHMPKM_00013 5776 6 Gut 0.16 protein_coding missense_variant MODERATE 216C>A Asn72Lys
M0172982 EOFHMPKM_00013 5779 6 Gut 0.16 protein_coding synonymous_variant LOW 219T>A Gly73Gly
M0172983 EOFHMPKM_00013 5781 6 Gut 0.16 protein_coding missense_variant MODERATE 221A>C Glu74Ala
M0172984 EOFHMPKM_00013 5782 6 Gut 0.16 protein_coding missense_variant MODERATE 222A>T Glu74Asp
M0172985 EOFHMPKM_00013 5788 6 Gut 0.16 protein_coding synonymous_variant LOW 228T>C Phe76Phe
M0172986 EOFHMPKM_00013 5789 6 Gut 0.16 protein_coding missense_variant MODERATE 229G>A Val77Ile
M0172987 EOFHMPKM_00013 5799 6 Gut 0.16 protein_coding missense_variant MODERATE 239G>A Arg80Gln
M0172988 EOFHMPKM_00013 5803 6 Gut 0.16 protein_coding synonymous_variant LOW 243A>G Lys81Lys
M0172989 EOFHMPKM_00013 5861 6 Gut 0.16 protein_coding synonymous_variant LOW 301T>C Leu101Leu
M0172990 EOFHMPKM_00007 5955 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -2993A>T None
M0172991 EOFHMPKM_00007 5958 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -2996T>C None
M0172992 EOFHMPKM_00014 5994 6 Gut 0.16 protein_coding missense_variant MODERATE 197A>G Asn66Ser
M0172993 EOFHMPKM_00014 6005 6 Gut 0.16 protein_coding synonymous_variant LOW 186G>A Leu62Leu
M0172994 EOFHMPKM_00014 6013 6 Gut 0.16 protein_coding missense_variant MODERATE 178C>T His60Tyr
M0172995 EOFHMPKM_00014 6028 6 Gut 0.16 protein_coding missense_variant MODERATE 163G>A Ala55Thr
M0172996 EOFHMPKM_00014 6063 6 Gut 0.16 protein_coding missense_variant MODERATE 128A>G Lys43Arg
M0172997 EOFHMPKM_00014 6065 8 Gut 0.22 protein_coding synonymous_variant LOW 126T>C Gly42Gly
M0172998 EOFHMPKM_00014 6113 6 Gut 0.16 protein_coding synonymous_variant LOW 78C>T Asp26Asp
M0172999 EOFHMPKM_00014 6179 6 Gut 0.16 protein_coding synonymous_variant LOW 12C>T Ile4Ile
M0173000 EOFHMPKM_00015 6300 6 Gut 0.16 protein_coding synonymous_variant LOW 534G>A Glu178Glu
M0173001 EOFHMPKM_00015 6327 6 Gut 0.16 protein_coding synonymous_variant LOW 507A>G Lys169Lys
M0173002 EOFHMPKM_00015 6330 6 Gut 0.16 protein_coding synonymous_variant LOW 504C>T Tyr168Tyr
M0173003 EOFHMPKM_00015 6345 6 Gut 0.16 protein_coding synonymous_variant LOW 489C>T Tyr163Tyr
M0173004 EOFHMPKM_00015 6383 6 Gut 0.16 protein_coding synonymous_variant LOW 451T>C Leu151Leu
M0173005 EOFHMPKM_00015 6387 8 Gut 0.22 protein_coding synonymous_variant LOW 447T>C Ala149Ala
M0173006 EOFHMPKM_00015 6402 6 Gut 0.16 protein_coding synonymous_variant LOW 432G>A Glu144Glu
M0173007 EOFHMPKM_00015 6585 6 Gut 0.16 protein_coding synonymous_variant LOW 249A>G Leu83Leu
M0173008 EOFHMPKM_00015 6624 6 Gut 0.16 protein_coding synonymous_variant LOW 210C>T Asp70Asp
M0173009 EOFHMPKM_00015 6630 8 Gut 0.22 protein_coding synonymous_variant LOW 204A>G Glu68Glu
M0173010 EOFHMPKM_00007 6835 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -3873G>A None
M0173011 EOFHMPKM_00007 6898 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -3936G>A None
M0173012 EOFHMPKM_00007 6909 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -3947A>T None
M0173013 EOFHMPKM_00007 6920 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -3958T>A None
M0173014 EOFHMPKM_00007 6925 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -3963C>G None
M0173015 EOFHMPKM_00007 6929 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -3967T>G None
M0173016 EOFHMPKM_00007 6938 6 Gut 0.16 protein_coding upstream_gene_variant MODIFIER -3976G>A None
M0173017 EOFHMPKM_00007 4788 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -1826T>C None
M0173018 EOFHMPKM_00011 4909 5 Gut 0.14 protein_coding synonymous_variant LOW 255A>G Lys85Lys
M0173019 EOFHMPKM_00011 4942 5 Gut 0.14 protein_coding synonymous_variant LOW 222T>G Val74Val
M0173020 EOFHMPKM_00011 4966 5 Gut 0.14 protein_coding synonymous_variant LOW 198A>T Arg66Arg
M0173021 EOFHMPKM_00011 5010 5 Gut 0.14 protein_coding missense_variant MODERATE 154A>G Asn52Asp
M0173022 EOFHMPKM_00011 5014 5 Gut 0.14 protein_coding synonymous_variant LOW 150A>G Arg50Arg
M0173023 EOFHMPKM_00011 5015 5 Gut 0.14 protein_coding missense_variant MODERATE 149G>A Arg50Lys
M0173024 EOFHMPKM_00011 5017 5 Gut 0.14 protein_coding missense_variant MODERATE 147A>C Gln49His
M0173025 EOFHMPKM_00011 5026 5 Gut 0.14 protein_coding synonymous_variant LOW 138A>G Arg46Arg
M0173026 EOFHMPKM_00011 5031 6 Gut 0.16 protein_coding synonymous_variant LOW 133C>T Leu45Leu
M0173027 EOFHMPKM_00011 5058 5 Gut 0.14 protein_coding missense_variant MODERATE 106C>A Gln36Lys
M0173028 EOFHMPKM_00011 5077 5 Gut 0.14 protein_coding synonymous_variant LOW 87T>C Asp29Asp
M0173029 EOFHMPKM_00011 5083 5 Gut 0.14 protein_coding synonymous_variant LOW 81T>A Thr27Thr
M0173030 EOFHMPKM_00007 5237 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -2275G>A None
M0173031 EOFHMPKM_00012 5346 6 Gut 0.16 protein_coding missense_variant MODERATE 70A>G Lys24Glu
M0173032 EOFHMPKM_00012 5380 5 Gut 0.14 protein_coding synonymous_variant LOW 36C>T Asp12Asp
M0173033 EOFHMPKM_00012 5392 5 Gut 0.14 protein_coding synonymous_variant LOW 24C>T Gly8Gly
M0173034 EOFHMPKM_00012 5410 5 Gut 0.14 protein_coding synonymous_variant LOW 6A>G Lys2Lys
M0173035 EOFHMPKM_00007 5430 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -2468T>C None
M0173036 EOFHMPKM_00007 5433 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -2471A>T None
M0173037 EOFHMPKM_00007 5461 7 Gut 0.19 protein_coding upstream_gene_variant MODIFIER -2499T>C None
M0173038 EOFHMPKM_00024 11860 4 Gut 0.11 protein_coding missense_variant MODERATE 1709T>C Ile570Thr
M0173039 EOFHMPKM_00024 11901 4 Gut 0.11 protein_coding synonymous_variant LOW 1668A>T Ile556Ile
M0173040 EOFHMPKM_00024 11902 4 Gut 0.11 protein_coding missense_variant MODERATE 1667T>C Ile556Thr
M0173041 EOFHMPKM_00024 11974 4 Gut 0.11 protein_coding missense_variant MODERATE 1595T>C Ile532Thr
M0173042 EOFHMPKM_00024 11980 4 Gut 0.11 protein_coding missense_variant MODERATE 1589T>C Phe530Ser
M0173043 EOFHMPKM_00024 11999 4 Gut 0.11 protein_coding missense_variant MODERATE 1570T>C Ser524Pro
M0173044 EOFHMPKM_00024 12014 4 Gut 0.11 protein_coding missense_variant MODERATE 1555A>C Ile519Leu
M0173045 EOFHMPKM_00024 12027 4 Gut 0.11 protein_coding synonymous_variant LOW 1542G>A Glu514Glu
M0173046 EOFHMPKM_00024 12038 4 Gut 0.11 protein_coding missense_variant MODERATE 1531C>T Pro511Ser
M0173047 EOFHMPKM_00024 12068 4 Gut 0.11 protein_coding missense_variant MODERATE 1501G>A Asp501Asn
M0173048 EOFHMPKM_00024 12090 3 Gut 0.08 protein_coding synonymous_variant LOW 1479T>C Asp493Asp
M0173049 EOFHMPKM_00024 12128 4 Gut 0.11 protein_coding missense_variant MODERATE 1441A>G Asn481Asp
M0173050 EOFHMPKM_00024 12161 4 Gut 0.11 protein_coding missense_variant MODERATE 1408G>A Glu470Lys
M0173051 EOFHMPKM_00024 12192 4 Gut 0.11 protein_coding synonymous_variant LOW 1377A>G Gln459Gln
M0173052 EOFHMPKM_00024 12301 3 Gut 0.08 protein_coding missense_variant MODERATE 1268G>A Arg423Lys
M0173053 EOFHMPKM_00024 12375 3 Gut 0.08 protein_coding synonymous_variant LOW 1194A>G Leu398Leu
M0173054 EOFHMPKM_00024 12460 3 Gut 0.08 protein_coding missense_variant MODERATE 1109G>A Arg370His
M0173055 EOFHMPKM_00024 12485 4 Gut 0.11 protein_coding missense_variant MODERATE 1084A>C Lys362Gln
M0173056 EOFHMPKM_00024 12524 4 Gut 0.11 protein_coding missense_variant MODERATE 1045A>G Lys349Glu
M0173057 EOFHMPKM_00024 12558 3 Gut 0.08 protein_coding synonymous_variant LOW 1011C>T Cys337Cys
M0173058 EOFHMPKM_00024 12573 3 Gut 0.08 protein_coding synonymous_variant LOW 996T>C Thr332Thr
M0173059 EOFHMPKM_00024 12594 4 Gut 0.11 protein_coding synonymous_variant LOW 975A>G Lys325Lys
M0173060 EOFHMPKM_00024 12627 3 Gut 0.08 protein_coding synonymous_variant LOW 942T>C Thr314Thr
M0173061 EOFHMPKM_00024 12629 4 Gut 0.11 protein_coding missense_variant MODERATE 940A>G Thr314Ala
M0173062 EOFHMPKM_00024 12633 4 Gut 0.11 protein_coding synonymous_variant LOW 936G>A Gln312Gln
M0173063 EOFHMPKM_00024 12723 3 Gut 0.08 protein_coding synonymous_variant LOW 846A>G Glu282Glu
M0173064 EOFHMPKM_00024 12774 3 Gut 0.08 protein_coding synonymous_variant LOW 795C>A Ala265Ala
M0173065 EOFHMPKM_00024 12820 3 Gut 0.08 protein_coding missense_variant MODERATE 749A>G His250Arg
M0173066 EOFHMPKM_00024 12828 3 Gut 0.08 protein_coding synonymous_variant LOW 741C>T Ile247Ile
M0173067 EOFHMPKM_00026 15112 3 Gut 0.08 protein_coding synonymous_variant LOW 441A>G Lys147Lys
M0173068 EOFHMPKM_00027 16677 3 Gut 0.08 protein_coding synonymous_variant LOW 1191G>A Thr397Thr
M0173069 EOFHMPKM_00030 19576 3 Gut 0.08 protein_coding missense_variant MODERATE 38G>C Arg13Thr
M0173070 EOFHMPKM_00034 23860 3 Gut 0.08 protein_coding missense_variant MODERATE 157G>C Glu53Gln
M0173071 EOFHMPKM_00034 23883 3 Gut 0.08 protein_coding synonymous_variant LOW 180G>A Lys60Lys
M0173072 EOFHMPKM_00034 23886 3 Gut 0.08 protein_coding synonymous_variant LOW 183G>A Glu61Glu
M0173073 EOFHMPKM_00034 23895 3 Gut 0.08 protein_coding synonymous_variant LOW 192C>T Ala64Ala
M0173074 EOFHMPKM_00034 23910 3 Gut 0.08 protein_coding synonymous_variant LOW 207T>A Ile69Ile
M0173075 EOFHMPKM_00035 25225 4 Gut 0.11 protein_coding synonymous_variant LOW 738T>C Phe246Phe
M0173076 EOFHMPKM_00036 27311 3 Gut 0.08 protein_coding synonymous_variant LOW 1713C>T Thr571Thr
M0173077 EOFHMPKM_00007 4619 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -1657A>G None
M0173078 EOFHMPKM_00007 4727 4 Gut 0.11 protein_coding upstream_gene_variant MODIFIER -1765T>C None
M0173079 EOFHMPKM_00007 4747 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -1785A>T None
M0173080 EOFHMPKM_00007 4748 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -1786A>T None
M0173081 EOFHMPKM_00007 4757 4 Gut 0.11 protein_coding upstream_gene_variant MODIFIER -1795A>G None
M0173082 EOFHMPKM_00007 4758 5 Gut 0.14 protein_coding upstream_gene_variant MODIFIER -1796G>A None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
EOFHMPKM_00036 QIB61280.1|GH23 100 0 15 616 0.9773 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term