Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C821
  Reference Plasmid   NZ_CP068110.1
  Reference Plasmid Size   76702
  Reference Plasmid GC Content   0.40
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0103065 GCKCHPID_00039 42383 13 Skin 0.15 protein_coding synonymous_variant LOW 1710T>C Ala570Ala
M0103066 GCKCHPID_00039 42506 13 Skin 0.15 protein_coding synonymous_variant LOW 1587T>C Gly529Gly
M0103067 GCKCHPID_00039 42584 13 Skin 0.15 protein_coding synonymous_variant LOW 1509A>G Ala503Ala
M0103068 GCKCHPID_00039 42758 13 Skin 0.15 protein_coding synonymous_variant LOW 1335A>G Ala445Ala
M0103069 GCKCHPID_00039 42850 5 Skin 0.06 protein_coding missense_variant MODERATE 1243G>A Val415Ile
M0103070 GCKCHPID_00039 42890 13 Skin 0.15 protein_coding synonymous_variant LOW 1203G>A Gln401Gln
M0103071 GCKCHPID_00039 43154 10 Skin 0.11 protein_coding synonymous_variant LOW 939A>G Gln313Gln
M0103072 GCKCHPID_00039 43229 11 Skin 0.13 protein_coding synonymous_variant LOW 864C>T Ser288Ser
M0103073 GCKCHPID_00059 70369 13 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4308T>C None
M0103074 GCKCHPID_00059 70372 13 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4311G>A None
M0103075 GCKCHPID_00059 70378 13 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4317C>T None
M0103076 GCKCHPID_00059 70507 13 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4446C>T None
M0103077 GCKCHPID_00059 70519 11 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4458G>A None
M0103078 GCKCHPID_00059 70540 12 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -4479A>G None
M0103079 GCKCHPID_00059 70576 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4515C>G None
M0103080 GCKCHPID_00059 70604 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4543A>G None
M0103081 GCKCHPID_00059 70609 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4548C>T None
M0103082 GCKCHPID_00059 70641 14 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4580A>G None
M0103083 GCKCHPID_00059 70651 11 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4590G>A None
M0103084 GCKCHPID_00059 70660 14 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4599T>C None
M0103085 GCKCHPID_00059 70667 11 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4606C>T None
M0103086 GCKCHPID_00059 70669 11 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4608A>T None
M0103087 GCKCHPID_00059 70683 14 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -4622A>G None
M0103088 GCKCHPID_00059 70684 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4623G>A None
M0103089 GCKCHPID_00059 70687 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4626A>G None
M0103090 GCKCHPID_00059 70706 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4645A>G None
M0103091 GCKCHPID_00059 70708 10 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4647G>T None
M0103092 GCKCHPID_00066 70781 18 Skin 0.21 protein_coding missense_variant MODERATE 652A>G Thr218Ala
M0103093 GCKCHPID_00066 71345 17 Skin 0.20 protein_coding missense_variant MODERATE 88A>G Lys30Glu
M0103094 GCKCHPID_00037 40213 5 Skin 0.06 protein_coding synonymous_variant LOW 1089T>A Ile363Ile
M0103095 GCKCHPID_00037 40237 3 Skin 0.03 protein_coding synonymous_variant LOW 1113T>C Val371Val
M0103096 GCKCHPID_00037 40285 9 Skin 0.10 protein_coding synonymous_variant LOW 1161A>G Leu387Leu
M0103097 GCKCHPID_00038 40489 4 Skin 0.05 protein_coding synonymous_variant LOW 69A>G Leu23Leu
M0103098 GCKCHPID_00038 40501 4 Skin 0.05 protein_coding synonymous_variant LOW 81C>G Val27Val
M0103099 GCKCHPID_00038 40906 4 Skin 0.05 protein_coding synonymous_variant LOW 486A>G Gly162Gly
M0103100 GCKCHPID_00038 40943 3 Skin 0.03 protein_coding missense_variant MODERATE 523G>A Ala175Thr
M0103101 GCKCHPID_00038 40953 3 Skin 0.03 protein_coding missense_variant MODERATE 533T>G Leu178Arg
M0103102 GCKCHPID_00038 41489 5 Skin 0.06 protein_coding missense_variant MODERATE 1069A>G Ile357Val
M0103103 GCKCHPID_00038 41495 3 Skin 0.03 protein_coding missense_variant MODERATE 1075G>A Val359Ile
M0103104 GCKCHPID_00037 39889 5 Skin 0.06 protein_coding synonymous_variant LOW 765A>G Glu255Glu
M0103105 GCKCHPID_00037 39913 5 Skin 0.06 protein_coding synonymous_variant LOW 789T>C Phe263Phe
M0103106 GCKCHPID_00037 39922 5 Skin 0.06 protein_coding synonymous_variant LOW 798T>G Val266Val
M0103107 GCKCHPID_00037 39937 4 Skin 0.05 protein_coding synonymous_variant LOW 813C>T Ile271Ile
M0103108 GCKCHPID_00037 39943 5 Skin 0.06 protein_coding synonymous_variant LOW 819G>T Gly273Gly
M0103109 GCKCHPID_00037 39949 4 Skin 0.05 protein_coding synonymous_variant LOW 825C>G Gly275Gly
M0103110 GCKCHPID_00037 39961 5 Skin 0.06 protein_coding synonymous_variant LOW 837C>G Thr279Thr
M0103111 GCKCHPID_00037 39982 5 Skin 0.06 protein_coding synonymous_variant LOW 858T>C Val286Val
M0103112 GCKCHPID_00037 40054 4 Skin 0.05 protein_coding synonymous_variant LOW 930G>A Val310Val
M0103113 GCKCHPID_00037 40060 4 Skin 0.05 protein_coding synonymous_variant LOW 936A>G Leu312Leu
M0103114 GCKCHPID_00037 40063 4 Skin 0.05 protein_coding synonymous_variant LOW 939A>G Glu313Glu
M0103115 GCKCHPID_00037 40066 4 Skin 0.05 protein_coding synonymous_variant LOW 942G>A Leu314Leu
M0103116 GCKCHPID_00037 40069 4 Skin 0.05 protein_coding synonymous_variant LOW 945G>A Leu315Leu
M0103117 GCKCHPID_00037 40085 3 Skin 0.03 protein_coding synonymous_variant LOW 961C>T Leu321Leu
M0103118 GCKCHPID_00037 40087 4 Skin 0.05 protein_coding synonymous_variant LOW 963G>A Leu321Leu
M0103119 GCKCHPID_00037 40111 8 Skin 0.09 protein_coding synonymous_variant LOW 987G>A Lys329Lys
M0103120 GCKCHPID_00037 40150 4 Skin 0.05 protein_coding synonymous_variant LOW 1026G>A Leu342Leu
M0103121 GCKCHPID_00037 40249 3 Skin 0.03 protein_coding synonymous_variant LOW 1125G>A Lys375Lys
M0103122 GCKCHPID_00037 40316 6 Skin 0.07 protein_coding missense_variant MODERATE 1192A>G Asn398Asp
M0103123 GCKCHPID_00031 40337 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4005G>A None
M0103124 GCKCHPID_00031 40350 7 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4018T>C None
M0103125 GCKCHPID_00031 40351 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4019A>T None
M0103126 GCKCHPID_00031 40359 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4027G>A None
M0103127 GCKCHPID_00031 40374 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4042T>C None
M0103128 GCKCHPID_00031 40383 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4051T>G None
M0103129 GCKCHPID_00031 40410 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4078T>C None
M0103130 GCKCHPID_00031 40411 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4079A>G None
M0103131 GCKCHPID_00038 41339 3 Skin 0.03 protein_coding missense_variant MODERATE 919T>A Tyr307Asn
M0103132 GCKCHPID_00038 41383 4 Skin 0.05 protein_coding synonymous_variant LOW 963G>A Leu321Leu
M0103133 GCKCHPID_00038 41426 4 Skin 0.05 protein_coding missense_variant MODERATE 1006G>A Ala336Thr
M0103134 GCKCHPID_00038 41427 4 Skin 0.05 protein_coding missense_variant MODERATE 1007C>T Ala336Val
M0103135 GCKCHPID_00038 41428 4 Skin 0.05 protein_coding synonymous_variant LOW 1008C>G Ala336Ala
M0103136 GCKCHPID_00038 41443 4 Skin 0.05 protein_coding synonymous_variant LOW 1023G>A Ser341Ser
M0103137 GCKCHPID_00038 41444 4 Skin 0.05 protein_coding missense_variant MODERATE 1024C>G Pro342Ala
M0103138 GCKCHPID_00038 41452 4 Skin 0.05 protein_coding synonymous_variant LOW 1032G>A Thr344Thr
M0103139 GCKCHPID_00038 41455 4 Skin 0.05 protein_coding synonymous_variant LOW 1035T>A Ala345Ala
M0103140 GCKCHPID_00038 41456 4 Skin 0.05 protein_coding synonymous_variant LOW 1036T>C Leu346Leu
M0103141 GCKCHPID_00038 41459 4 Skin 0.05 protein_coding synonymous_variant LOW 1039C>A Arg347Arg
M0103142 GCKCHPID_00027 33111 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -14T>G None
M0103143 GCKCHPID_00027 33118 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -21A>G None
M0103144 GCKCHPID_00028 34129 5 Skin 0.06 protein_coding missense_variant MODERATE 1001G>A Arg334Gln
M0103145 GCKCHPID_00028 34130 5 Skin 0.06 protein_coding synonymous_variant LOW 1002G>A Arg334Arg
M0103146 GCKCHPID_00028 34139 5 Skin 0.06 protein_coding missense_variant MODERATE 1011A>T Glu337Asp
M0103147 GCKCHPID_00028 34357 7 Skin 0.08 protein_coding missense_variant MODERATE 1229T>G Val410Gly
M0103148 GCKCHPID_00028 34427 6 Skin 0.07 protein_coding missense_variant MODERATE 1299T>G Ile433Met
M0103149 GCKCHPID_00027 34532 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1435G>T None
M0103150 GCKCHPID_00027 34535 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1438T>C None
M0103151 GCKCHPID_00027 34578 9 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1481C>T None
M0103152 GCKCHPID_00029 34664 8 Skin 0.09 protein_coding synonymous_variant LOW 75C>T Ala25Ala
M0103153 GCKCHPID_00029 34700 8 Skin 0.09 protein_coding synonymous_variant LOW 111T>C Phe37Phe
M0103154 GCKCHPID_00029 34832 10 Skin 0.11 protein_coding missense_variant MODERATE 243C>A His81Gln
M0103155 GCKCHPID_00029 34877 9 Skin 0.10 protein_coding synonymous_variant LOW 288A>G Leu96Leu
M0103156 GCKCHPID_00029 35042 4 Skin 0.05 protein_coding synonymous_variant LOW 453C>A Val151Val
M0103157 GCKCHPID_00029 35128 7 Skin 0.08 protein_coding missense_variant MODERATE 539A>C Asn180Thr
M0103158 GCKCHPID_00029 35225 4 Skin 0.05 protein_coding synonymous_variant LOW 636T>C Ile212Ile
M0103159 GCKCHPID_00029 35299 4 Skin 0.05 protein_coding missense_variant MODERATE 710T>C Val237Ala
M0103160 GCKCHPID_00030 35439 4 Skin 0.05 protein_coding missense_variant MODERATE 92G>A Arg31Gln
M0103161 GCKCHPID_00030 35501 3 Skin 0.03 protein_coding missense_variant MODERATE 154A>G Lys52Glu
M0103162 GCKCHPID_00030 35564 3 Skin 0.03 protein_coding synonymous_variant LOW 217C>T Leu73Leu
M0103163 GCKCHPID_00030 35627 3 Skin 0.03 protein_coding missense_variant MODERATE 280A>G Ile94Val
M0103164 GCKCHPID_00030 35644 3 Skin 0.03 protein_coding synonymous_variant LOW 297T>C His99His
M0103165 GCKCHPID_00027 35767 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -2670A>G None
M0103166 GCKCHPID_00027 35768 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2671C>T None
M0103167 GCKCHPID_00027 35805 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2708C>T None
M0103168 GCKCHPID_00027 35818 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2721G>T None
M0103169 GCKCHPID_00027 35822 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -2725A>T None
M0103170 GCKCHPID_00026 30281 3 Skin 0.03 protein_coding missense_variant MODERATE 875G>T Cys292Phe
M0103171 GCKCHPID_00026 30384 3 Skin 0.03 protein_coding synonymous_variant LOW 978T>C Thr326Thr
M0103172 GCKCHPID_00026 30390 3 Skin 0.03 protein_coding synonymous_variant LOW 984G>A Leu328Leu
M0103173 GCKCHPID_00026 31092 3 Skin 0.03 protein_coding missense_variant MODERATE 1686A>C Gln562His
M0103174 GCKCHPID_00026 31094 3 Skin 0.03 protein_coding missense_variant MODERATE 1688A>G Asn563Ser
M0103175 GCKCHPID_00026 31097 3 Skin 0.03 protein_coding missense_variant MODERATE 1691A>C Asp564Ala
M0103176 GCKCHPID_00026 31099 3 Skin 0.03 protein_coding missense_variant MODERATE 1693T>G Leu565Val
M0103177 GCKCHPID_00026 31102 3 Skin 0.03 protein_coding missense_variant MODERATE 1696G>A Glu566Lys
M0103178 GCKCHPID_00026 31302 3 Skin 0.03 protein_coding synonymous_variant LOW 1896T>C Ser632Ser
M0103179 GCKCHPID_00026 31422 3 Skin 0.03 protein_coding synonymous_variant LOW 2016G>C Gly672Gly
M0103180 GCKCHPID_00026 31503 3 Skin 0.03 protein_coding synonymous_variant LOW 2097C>T Thr699Thr
M0103181 GCKCHPID_00026 31635 3 Skin 0.03 protein_coding synonymous_variant LOW 2229C>T Tyr743Tyr
M0103182 GCKCHPID_00026 31650 3 Skin 0.03 protein_coding synonymous_variant LOW 2244A>G Gln748Gln
M0103183 GCKCHPID_00026 31653 3 Skin 0.03 protein_coding synonymous_variant LOW 2247C>T Gly749Gly
M0103184 GCKCHPID_00026 31656 3 Skin 0.03 protein_coding synonymous_variant LOW 2250T>C Tyr750Tyr
M0103185 GCKCHPID_00026 31662 3 Skin 0.03 protein_coding synonymous_variant LOW 2256T>C Asp752Asp
M0103186 GCKCHPID_00026 31667 3 Skin 0.03 protein_coding missense_variant MODERATE 2261C>G Thr754Arg
M0103187 GCKCHPID_00026 31668 3 Skin 0.03 protein_coding synonymous_variant LOW 2262G>T Thr754Thr
M0103188 GCKCHPID_00026 31671 3 Skin 0.03 protein_coding synonymous_variant LOW 2265G>A Thr755Thr
M0103189 GCKCHPID_00026 31674 3 Skin 0.03 protein_coding synonymous_variant LOW 2268G>A Gly756Gly
M0103190 GCKCHPID_00026 31680 3 Skin 0.03 protein_coding synonymous_variant LOW 2274T>G Ala758Ala
M0103191 GCKCHPID_00026 31707 3 Skin 0.03 protein_coding synonymous_variant LOW 2301C>T Ala767Ala
M0103192 GCKCHPID_00026 31785 3 Skin 0.03 protein_coding synonymous_variant LOW 2379T>C Gly793Gly
M0103193 GCKCHPID_00026 32379 4 Skin 0.05 protein_coding synonymous_variant LOW 2973T>C Arg991Arg
M0103194 GCKCHPID_00026 32382 4 Skin 0.05 protein_coding synonymous_variant LOW 2976T>C Tyr992Tyr
M0103195 GCKCHPID_00026 32391 4 Skin 0.05 protein_coding synonymous_variant LOW 2985A>G Thr995Thr
M0103196 GCKCHPID_00026 32433 3 Skin 0.03 protein_coding synonymous_variant LOW 3027T>C Leu1009Leu
M0103197 GCKCHPID_00026 32460 4 Skin 0.05 protein_coding synonymous_variant LOW 3054A>G Pro1018Pro
M0103198 GCKCHPID_00026 32484 3 Skin 0.03 protein_coding synonymous_variant LOW 3078G>A Lys1026Lys
M0103199 GCKCHPID_00026 32487 3 Skin 0.03 protein_coding synonymous_variant LOW 3081G>A Lys1027Lys
M0103200 GCKCHPID_00026 32490 3 Skin 0.03 protein_coding synonymous_variant LOW 3084A>G Gln1028Gln
M0103201 GCKCHPID_00026 32538 4 Skin 0.05 protein_coding synonymous_variant LOW 3132T>G Val1044Val
M0103202 GCKCHPID_00028 32554 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -575T>C None
M0103203 GCKCHPID_00028 32559 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -570T>G None
M0103204 GCKCHPID_00028 32570 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -559G>A None
M0103205 GCKCHPID_00028 32577 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -552G>A None
M0103206 GCKCHPID_00028 32580 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -549C>T None
M0103207 GCKCHPID_00028 32604 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -525C>T None
M0103208 GCKCHPID_00028 32752 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -377G>A None
M0103209 GCKCHPID_00028 32858 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -271A>G None
M0103210 GCKCHPID_00028 34494 3 Skin 0.03 protein_coding missense_variant MODERATE 1366A>G Ile456Val
M0103211 GCKCHPID_00029 34643 5 Skin 0.06 protein_coding synonymous_variant LOW 54C>T Thr18Thr
M0103212 GCKCHPID_00029 34721 4 Skin 0.05 protein_coding synonymous_variant LOW 132C>T Gly44Gly
M0103213 GCKCHPID_00037 39301 4 Skin 0.05 protein_coding synonymous_variant LOW 177C>T Ser59Ser
M0103214 GCKCHPID_00037 39310 4 Skin 0.05 protein_coding synonymous_variant LOW 186T>C Tyr62Tyr
M0103215 GCKCHPID_00037 39313 4 Skin 0.05 protein_coding synonymous_variant LOW 189A>G Gln63Gln
M0103216 GCKCHPID_00037 39382 3 Skin 0.03 protein_coding synonymous_variant LOW 258T>C Val86Val
M0103217 GCKCHPID_00037 39415 4 Skin 0.05 protein_coding synonymous_variant LOW 291T>C Asp97Asp
M0103218 GCKCHPID_00037 39570 3 Skin 0.03 protein_coding missense_variant MODERATE 446T>A Phe149Tyr
M0103219 GCKCHPID_00037 39572 3 Skin 0.03 protein_coding synonymous_variant LOW 448T>C Leu150Leu
M0103220 GCKCHPID_00037 39688 3 Skin 0.03 protein_coding synonymous_variant LOW 564C>T Thr188Thr
M0103221 GCKCHPID_00037 39691 3 Skin 0.03 protein_coding synonymous_variant LOW 567C>T Ile189Ile
M0103222 GCKCHPID_00037 40138 3 Skin 0.03 protein_coding synonymous_variant LOW 1014A>G Ala338Ala
M0103223 GCKCHPID_00037 40321 3 Skin 0.03 protein_coding synonymous_variant LOW 1197A>G Glu399Glu
M0103224 GCKCHPID_00038 40453 3 Skin 0.03 protein_coding synonymous_variant LOW 33T>C Pro11Pro
M0103225 GCKCHPID_00038 40456 3 Skin 0.03 protein_coding synonymous_variant LOW 36T>C Asn12Asn
M0103226 GCKCHPID_00038 40555 3 Skin 0.03 protein_coding synonymous_variant LOW 135T>C Gly45Gly
M0103227 GCKCHPID_00038 40694 4 Skin 0.05 protein_coding missense_variant MODERATE 274A>G Asn92Asp
M0103228 GCKCHPID_00034 42048 9 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4074A>G None
M0103229 GCKCHPID_00039 42311 9 Skin 0.10 protein_coding synonymous_variant LOW 1782G>A Ala594Ala
M0103230 GCKCHPID_00039 42746 8 Skin 0.09 protein_coding synonymous_variant LOW 1347G>A Leu449Leu
M0103231 GCKCHPID_00039 43868 6 Skin 0.07 protein_coding synonymous_variant LOW 225A>G Leu75Leu
M0103232 GCKCHPID_00039 43886 7 Skin 0.08 protein_coding synonymous_variant LOW 207A>G Lys69Lys
M0103233 GCKCHPID_00040 44179 4 Skin 0.05 protein_coding missense_variant MODERATE 942C>A His314Gln
M0103234 GCKCHPID_00040 44629 12 Skin 0.14 protein_coding missense_variant MODERATE 492A>T Glu164Asp
M0103235 GCKCHPID_00040 44638 12 Skin 0.14 protein_coding synonymous_variant LOW 483T>C Ile161Ile
M0103236 GCKCHPID_00040 45104 6 Skin 0.07 protein_coding missense_variant MODERATE 17T>A Leu6Gln
M0103237 GCKCHPID_00041 45303 12 Skin 0.14 protein_coding synonymous_variant LOW 579A>G Leu193Leu
M0103238 GCKCHPID_00042 46068 11 Skin 0.13 protein_coding synonymous_variant LOW 978G>A Gln326Gln
M0103239 GCKCHPID_00042 46096 11 Skin 0.13 protein_coding missense_variant MODERATE 950A>C Asn317Thr
M0103240 GCKCHPID_00042 46217 11 Skin 0.13 protein_coding missense_variant MODERATE 829G>A Ala277Thr
M0103241 GCKCHPID_00042 46527 3 Skin 0.03 protein_coding missense_variant MODERATE 519A>C Lys173Asn
M0103242 GCKCHPID_00039 47125 9 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -3033A>C None
M0103243 GCKCHPID_00043 47355 3 Skin 0.03 protein_coding synonymous_variant LOW 2301C>T Gly767Gly
M0103244 GCKCHPID_00043 47817 9 Skin 0.10 protein_coding synonymous_variant LOW 1839T>C Thr613Thr
M0103245 GCKCHPID_00043 48385 11 Skin 0.13 protein_coding missense_variant MODERATE 1271T>C Ile424Thr
M0103246 GCKCHPID_00043 48444 6 Skin 0.07 protein_coding synonymous_variant LOW 1212C>A Pro404Pro
M0103247 GCKCHPID_00043 48447 9 Skin 0.10 protein_coding synonymous_variant LOW 1209T>C Thr403Thr
M0103248 GCKCHPID_00043 48473 10 Skin 0.11 protein_coding missense_variant MODERATE 1183A>G Met395Val
M0103249 GCKCHPID_00043 48492 11 Skin 0.13 protein_coding synonymous_variant LOW 1164A>G Ser388Ser
M0103250 GCKCHPID_00043 48526 7 Skin 0.08 protein_coding missense_variant MODERATE 1130A>T Lys377Ile
M0103251 GCKCHPID_00043 48542 7 Skin 0.08 protein_coding missense_variant MODERATE 1114G>A Asp372Asn
M0103252 GCKCHPID_00043 48581 7 Skin 0.08 protein_coding missense_variant MODERATE 1075C>G Pro359Ala
M0103253 GCKCHPID_00043 48596 9 Skin 0.10 protein_coding missense_variant MODERATE 1060A>G Ile354Val
M0103254 GCKCHPID_00043 48597 9 Skin 0.10 protein_coding synonymous_variant LOW 1059G>A Ser353Ser
M0103255 GCKCHPID_00043 48605 9 Skin 0.10 protein_coding missense_variant MODERATE 1051C>T Pro351Ser
M0103256 GCKCHPID_00043 48608 9 Skin 0.10 protein_coding missense_variant MODERATE 1048G>T Ala350Ser
M0103257 GCKCHPID_00043 48651 7 Skin 0.08 protein_coding synonymous_variant LOW 1005A>G Thr335Thr
M0103258 GCKCHPID_00043 48690 7 Skin 0.08 protein_coding synonymous_variant LOW 966C>T Tyr322Tyr
M0103259 GCKCHPID_00043 48693 7 Skin 0.08 protein_coding synonymous_variant LOW 963C>T Asn321Asn
M0103260 GCKCHPID_00043 48696 7 Skin 0.08 protein_coding synonymous_variant LOW 960T>A Leu320Leu
M0103261 GCKCHPID_00043 48732 7 Skin 0.08 protein_coding synonymous_variant LOW 924C>T Asp308Asp
M0103262 GCKCHPID_00043 48810 9 Skin 0.10 protein_coding synonymous_variant LOW 846T>C Pro282Pro
M0103263 GCKCHPID_00043 48843 8 Skin 0.09 protein_coding synonymous_variant LOW 813C>T Tyr271Tyr
M0103264 GCKCHPID_00043 48864 9 Skin 0.10 protein_coding synonymous_variant LOW 792C>T Asn264Asn
M0103265 GCKCHPID_00043 48880 8 Skin 0.09 protein_coding missense_variant MODERATE 776C>T Ala259Val
M0103266 GCKCHPID_00043 48900 9 Skin 0.10 protein_coding synonymous_variant LOW 756C>T Asn252Asn
M0103267 GCKCHPID_00043 48918 5 Skin 0.06 protein_coding synonymous_variant LOW 738C>T Thr246Thr
M0103268 GCKCHPID_00043 49230 7 Skin 0.08 protein_coding synonymous_variant LOW 426G>A Lys142Lys
M0103269 GCKCHPID_00040 49709 7 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4589T>G None
M0103270 GCKCHPID_00040 49738 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4618C>T None
M0103271 GCKCHPID_00040 49740 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4620A>T None
M0103272 GCKCHPID_00040 49757 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4637G>T None
M0103273 GCKCHPID_00044 49771 3 Skin 0.03 protein_coding missense_variant MODERATE 620A>G Glu207Gly
M0103274 GCKCHPID_00044 49776 3 Skin 0.03 protein_coding missense_variant MODERATE 615G>A Met205Ile
M0103275 GCKCHPID_00044 49809 3 Skin 0.03 protein_coding synonymous_variant LOW 582A>G Gln194Gln
M0103276 GCKCHPID_00044 49852 3 Skin 0.03 protein_coding missense_variant MODERATE 539C>T Ser180Leu
M0103277 GCKCHPID_00044 49864 3 Skin 0.03 protein_coding missense_variant MODERATE 527T>G Phe176Cys
M0103278 GCKCHPID_00044 50127 6 Skin 0.07 protein_coding synonymous_variant LOW 264G>A Leu88Leu
M0103279 GCKCHPID_00045 50457 5 Skin 0.06 protein_coding missense_variant MODERATE 2034C>G Phe678Leu
M0103280 GCKCHPID_00045 50539 3 Skin 0.03 protein_coding missense_variant MODERATE 1952C>A Thr651Asn
M0103281 GCKCHPID_00045 50700 5 Skin 0.06 protein_coding synonymous_variant LOW 1791A>G Val597Val
M0103282 GCKCHPID_00045 50732 5 Skin 0.06 protein_coding missense_variant MODERATE 1759G>C Val587Leu
M0103283 GCKCHPID_00045 50740 5 Skin 0.06 protein_coding missense_variant MODERATE 1751T>C Ile584Thr
M0103284 GCKCHPID_00045 50856 5 Skin 0.06 protein_coding synonymous_variant LOW 1635G>A Leu545Leu
M0103285 GCKCHPID_00045 50880 4 Skin 0.05 protein_coding synonymous_variant LOW 1611A>G Gln537Gln
M0103286 GCKCHPID_00045 50985 5 Skin 0.06 protein_coding synonymous_variant LOW 1506A>G Ala502Ala
M0103287 GCKCHPID_00045 51071 5 Skin 0.06 protein_coding missense_variant MODERATE 1420T>C Tyr474His
M0103288 GCKCHPID_00045 51210 4 Skin 0.05 protein_coding synonymous_variant LOW 1281G>A Gly427Gly
M0103289 GCKCHPID_00045 51263 4 Skin 0.05 protein_coding missense_variant MODERATE 1228G>A Ala410Thr
M0103290 GCKCHPID_00045 51282 4 Skin 0.05 protein_coding synonymous_variant LOW 1209G>A Thr403Thr
M0103291 GCKCHPID_00045 51333 4 Skin 0.05 protein_coding synonymous_variant LOW 1158T>C Leu386Leu
M0103292 GCKCHPID_00045 51389 3 Skin 0.03 protein_coding missense_variant MODERATE 1102A>G Thr368Ala
M0103293 GCKCHPID_00045 51542 5 Skin 0.06 protein_coding missense_variant MODERATE 949A>G Ile317Val
M0103294 GCKCHPID_00045 51584 5 Skin 0.06 protein_coding missense_variant MODERATE 907G>A Val303Met
M0103295 GCKCHPID_00045 51591 5 Skin 0.06 protein_coding synonymous_variant LOW 900T>C Asn300Asn
M0103296 GCKCHPID_00045 51594 5 Skin 0.06 protein_coding synonymous_variant LOW 897G>A Leu299Leu
M0103297 GCKCHPID_00045 51630 5 Skin 0.06 protein_coding synonymous_variant LOW 861T>C Ala287Ala
M0103298 GCKCHPID_00045 51636 4 Skin 0.05 protein_coding synonymous_variant LOW 855C>T Thr285Thr
M0103299 GCKCHPID_00045 51692 6 Skin 0.07 protein_coding missense_variant MODERATE 799C>A Leu267Ile
M0103300 GCKCHPID_00045 51822 6 Skin 0.07 protein_coding synonymous_variant LOW 669T>G Ala223Ala
M0103301 GCKCHPID_00045 52144 5 Skin 0.06 protein_coding missense_variant MODERATE 347C>A Pro116His
M0103302 GCKCHPID_00045 52377 6 Skin 0.07 protein_coding synonymous_variant LOW 114T>C Ile38Ile
M0103303 GCKCHPID_00045 52455 5 Skin 0.06 protein_coding synonymous_variant LOW 36A>G Thr12Thr
M0103304 GCKCHPID_00045 52467 4 Skin 0.05 protein_coding synonymous_variant LOW 24A>G Gln8Gln
M0103305 GCKCHPID_00046 52930 4 Skin 0.05 protein_coding synonymous_variant LOW 1480T>C Leu494Leu
M0103306 GCKCHPID_00048 56071 4 Skin 0.05 protein_coding missense_variant MODERATE 335T>C Met112Thr
M0103307 GCKCHPID_00048 56162 4 Skin 0.05 protein_coding missense_variant MODERATE 244G>A Ala82Thr
M0103308 GCKCHPID_00048 56175 4 Skin 0.05 protein_coding synonymous_variant LOW 231T>G Val77Val
M0103309 GCKCHPID_00048 56179 4 Skin 0.05 protein_coding missense_variant MODERATE 227A>G Glu76Gly
M0103310 GCKCHPID_00049 56639 4 Skin 0.05 protein_coding synonymous_variant LOW 1162C>T Leu388Leu
M0103311 GCKCHPID_00049 57282 3 Skin 0.03 protein_coding synonymous_variant LOW 519A>G Gln173Gln
M0103312 GCKCHPID_00050 57964 5 Skin 0.06 protein_coding synonymous_variant LOW 1638G>A Arg546Arg
M0103313 GCKCHPID_00050 58189 4 Skin 0.05 protein_coding synonymous_variant LOW 1413C>T Ala471Ala
M0103314 GCKCHPID_00045 51660 4 Skin 0.05 protein_coding synonymous_variant LOW 831T>C Gly277Gly
M0103315 GCKCHPID_00045 51718 4 Skin 0.05 protein_coding missense_variant MODERATE 773A>G Gln258Arg
M0103316 GCKCHPID_00045 51834 5 Skin 0.06 protein_coding synonymous_variant LOW 657A>T Thr219Thr
M0103317 GCKCHPID_00045 52302 5 Skin 0.06 protein_coding synonymous_variant LOW 189C>T Ser63Ser
M0103318 GCKCHPID_00045 52303 3 Skin 0.03 protein_coding missense_variant MODERATE 188G>T Ser63Ile
M0103319 GCKCHPID_00045 52478 3 Skin 0.03 protein_coding missense_variant MODERATE 13G>T Ala5Ser
M0103320 GCKCHPID_00048 56313 3 Skin 0.03 protein_coding synonymous_variant LOW 93G>A Leu31Leu
M0103321 GCKCHPID_00043 47704 5 Skin 0.06 protein_coding missense_variant MODERATE 1952G>C Ser651Thr
M0103322 GCKCHPID_00043 47727 5 Skin 0.06 protein_coding synonymous_variant LOW 1929T>A Ser643Ser
M0103323 GCKCHPID_00043 49318 4 Skin 0.05 protein_coding missense_variant MODERATE 338A>G His113Arg
M0103324 GCKCHPID_00059 65829 5 Skin 0.06 protein_coding missense_variant MODERATE 233C>G Ala78Gly
M0103325 GCKCHPID_00059 65906 4 Skin 0.05 protein_coding synonymous_variant LOW 156C>T Pro52Pro
M0103326 GCKCHPID_00059 65939 4 Skin 0.05 protein_coding synonymous_variant LOW 123G>A Ala41Ala
M0103327 GCKCHPID_00059 65953 4 Skin 0.05 protein_coding missense_variant MODERATE 109T>G Leu37Val
M0103328 GCKCHPID_00059 65961 4 Skin 0.05 protein_coding missense_variant MODERATE 101C>T Ala34Val
M0103329 GCKCHPID_00059 65995 7 Skin 0.08 protein_coding missense_variant MODERATE 67A>G Ile23Val
M0103330 GCKCHPID_00054 66134 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -3552T>C None
M0103331 GCKCHPID_00054 66250 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3668A>G None
M0103332 GCKCHPID_00060 66617 12 Skin 0.14 protein_coding synonymous_variant LOW 204A>G Glu68Glu
M0103333 GCKCHPID_00060 66620 12 Skin 0.14 protein_coding synonymous_variant LOW 201C>T Thr67Thr
M0103334 GCKCHPID_00060 66622 12 Skin 0.14 protein_coding missense_variant MODERATE 199A>G Thr67Ala
M0103335 GCKCHPID_00060 66628 12 Skin 0.14 protein_coding missense_variant MODERATE 193G>C Ala65Pro
M0103336 GCKCHPID_00060 66629 12 Skin 0.14 protein_coding synonymous_variant LOW 192A>G Pro64Pro
M0103337 GCKCHPID_00060 66641 12 Skin 0.14 protein_coding synonymous_variant LOW 180T>C Arg60Arg
M0103338 GCKCHPID_00060 66644 12 Skin 0.14 protein_coding synonymous_variant LOW 177G>A Leu59Leu
M0103339 GCKCHPID_00060 66676 6 Skin 0.07 protein_coding missense_variant MODERATE 145G>C Glu49Gln
M0103340 GCKCHPID_00060 66686 3 Skin 0.03 protein_coding synonymous_variant LOW 135G>A Arg45Arg
M0103341 GCKCHPID_00060 66767 3 Skin 0.03 protein_coding synonymous_variant LOW 54C>T Thr18Thr
M0103342 GCKCHPID_00060 66770 3 Skin 0.03 protein_coding synonymous_variant LOW 51C>T Asn17Asn
M0103343 GCKCHPID_00013 20299 3 Skin 0.03 protein_coding synonymous_variant LOW 579C>A Thr193Thr
M0103344 GCKCHPID_00013 20574 3 Skin 0.03 protein_coding missense_variant MODERATE 304A>G Ile102Val
M0103345 GCKCHPID_00013 20653 3 Skin 0.03 protein_coding missense_variant MODERATE 225C>A Asp75Glu
M0103346 GCKCHPID_00013 20656 3 Skin 0.03 protein_coding synonymous_variant LOW 222A>G Ala74Ala
M0103347 GCKCHPID_00013 20829 3 Skin 0.03 protein_coding missense_variant MODERATE 49G>A Val17Ile
M0103348 GCKCHPID_00009 20879 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4009G>A None
M0103349 GCKCHPID_00009 20904 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4034T>C None
M0103350 GCKCHPID_00009 20912 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4042A>G None
M0103351 GCKCHPID_00014 21149 3 Skin 0.03 protein_coding synonymous_variant LOW 102A>G Ala34Ala
M0103352 GCKCHPID_00064 69387 14 Skin 0.16 protein_coding missense_variant MODERATE 625C>G Gln209Glu
M0103353 GCKCHPID_00064 69504 16 Skin 0.18 protein_coding missense_variant MODERATE 508A>G Ile170Val
M0103354 GCKCHPID_00064 69594 16 Skin 0.18 protein_coding missense_variant MODERATE 418G>A Val140Ile
M0103355 GCKCHPID_00059 70019 12 Skin 0.14 protein_coding upstream_gene_variant MODIFIER -3958G>T None
M0103356 GCKCHPID_00065 70166 16 Skin 0.18 protein_coding missense_variant MODERATE 94A>C Met32Leu
M0103357 GCKCHPID_00065 70191 11 Skin 0.13 protein_coding missense_variant MODERATE 119T>C Ile40Thr
M0103358 GCKCHPID_00065 70193 11 Skin 0.13 protein_coding synonymous_variant LOW 121T>C Leu41Leu
M0103359 GCKCHPID_00065 70195 11 Skin 0.13 protein_coding missense_variant MODERATE 123A>C Leu41Phe
M0103360 GCKCHPID_00065 70201 12 Skin 0.14 protein_coding synonymous_variant LOW 129A>G Gln43Gln
M0103361 GCKCHPID_00065 70204 12 Skin 0.14 protein_coding synonymous_variant LOW 132C>A Pro44Pro
M0103362 GCKCHPID_00059 70426 9 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4365G>C None
M0103363 GCKCHPID_00059 70716 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4655C>A None
M0103364 GCKCHPID_00059 70738 7 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4677C>T None
M0103365 GCKCHPID_00059 64814 6 Skin 0.07 protein_coding synonymous_variant LOW 1248G>A Ala416Ala
M0103366 GCKCHPID_00059 64907 7 Skin 0.08 protein_coding synonymous_variant LOW 1155A>G Val385Val
M0103367 GCKCHPID_00059 64933 7 Skin 0.08 protein_coding synonymous_variant LOW 1129T>C Leu377Leu
M0103368 GCKCHPID_00059 65066 9 Skin 0.10 protein_coding synonymous_variant LOW 996A>G Ala332Ala
M0103369 GCKCHPID_00059 65567 8 Skin 0.09 protein_coding synonymous_variant LOW 495G>A Ala165Ala
M0103370 GCKCHPID_00059 65568 8 Skin 0.09 protein_coding missense_variant MODERATE 494C>T Ala165Val
M0103371 GCKCHPID_00059 65569 8 Skin 0.09 protein_coding missense_variant MODERATE 493G>T Ala165Ser
M0103372 GCKCHPID_00059 65577 4 Skin 0.05 protein_coding missense_variant MODERATE 485C>T Ala162Val
M0103373 GCKCHPID_00050 58861 4 Skin 0.05 protein_coding synonymous_variant LOW 741C>T Pro247Pro
M0103374 GCKCHPID_00065 70219 5 Skin 0.06 protein_coding synonymous_variant LOW 147A>T Ser49Ser
M0103375 GCKCHPID_00065 70267 4 Skin 0.05 protein_coding synonymous_variant LOW 195C>A Arg65Arg
M0103376 GCKCHPID_00065 70269 3 Skin 0.03 protein_coding missense_variant MODERATE 197A>G Lys66Arg
M0103377 GCKCHPID_00065 70289 6 Skin 0.07 protein_coding missense_variant MODERATE 217A>G Ser73Gly
M0103378 GCKCHPID_00065 70290 6 Skin 0.07 protein_coding missense_variant MODERATE 218G>C Ser73Thr
M0103379 GCKCHPID_00065 70297 6 Skin 0.07 protein_coding synonymous_variant LOW 225C>T Asp75Asp
M0103380 GCKCHPID_00065 70300 6 Skin 0.07 protein_coding missense_variant MODERATE 228C>G Asn76Lys
M0103381 GCKCHPID_00065 70309 6 Skin 0.07 protein_coding synonymous_variant LOW 237A>C Ser79Ser
M0103382 GCKCHPID_00062 67966 4 Skin 0.05 protein_coding missense_variant MODERATE 121G>A Glu41Lys
M0103383 GCKCHPID_00063 68266 17 Skin 0.20 protein_coding synonymous_variant LOW 345A>G Pro115Pro
M0103384 GCKCHPID_00063 68452 15 Skin 0.17 protein_coding synonymous_variant LOW 159G>T Thr53Thr
M0103385 GCKCHPID_00064 68744 5 Skin 0.06 protein_coding missense_variant MODERATE 1268C>T Ala423Val
M0103386 GCKCHPID_00064 68767 13 Skin 0.15 protein_coding synonymous_variant LOW 1245G>A Leu415Leu
M0103387 GCKCHPID_00064 68770 11 Skin 0.13 protein_coding synonymous_variant LOW 1242G>A Val414Val
M0103388 GCKCHPID_00064 68773 12 Skin 0.14 protein_coding synonymous_variant LOW 1239T>C Pro413Pro
M0103389 GCKCHPID_00064 68776 14 Skin 0.16 protein_coding missense_variant MODERATE 1236G>C Leu412Phe
M0103390 GCKCHPID_00064 68778 14 Skin 0.16 protein_coding missense_variant MODERATE 1234T>A Leu412Met
M0103391 GCKCHPID_00064 68779 12 Skin 0.14 protein_coding synonymous_variant LOW 1233C>T Thr411Thr
M0103392 GCKCHPID_00064 68782 14 Skin 0.16 protein_coding synonymous_variant LOW 1230G>A Leu410Leu
M0103393 GCKCHPID_00064 68784 14 Skin 0.16 protein_coding synonymous_variant LOW 1228C>T Leu410Leu
M0103394 GCKCHPID_00064 68791 7 Skin 0.08 protein_coding synonymous_variant LOW 1221A>G Gly407Gly
M0103395 GCKCHPID_00064 68806 14 Skin 0.16 protein_coding synonymous_variant LOW 1206T>C Tyr402Tyr
M0103396 GCKCHPID_00064 68872 8 Skin 0.09 protein_coding synonymous_variant LOW 1140T>C Gly380Gly
M0103397 GCKCHPID_00064 68881 5 Skin 0.06 protein_coding synonymous_variant LOW 1131C>T Thr377Thr
M0103398 GCKCHPID_00064 68890 8 Skin 0.09 protein_coding synonymous_variant LOW 1122G>T Pro374Pro
M0103399 GCKCHPID_00064 68896 9 Skin 0.10 protein_coding synonymous_variant LOW 1116A>G Leu372Leu
M0103400 GCKCHPID_00064 68959 14 Skin 0.16 protein_coding synonymous_variant LOW 1053G>A Ala351Ala
M0103401 GCKCHPID_00064 69031 6 Skin 0.07 protein_coding synonymous_variant LOW 981G>A Leu327Leu
M0103402 GCKCHPID_00064 69598 4 Skin 0.05 protein_coding synonymous_variant LOW 414A>G Ala138Ala
M0103403 GCKCHPID_00064 69613 4 Skin 0.05 protein_coding synonymous_variant LOW 399T>A Pro133Pro
M0103404 GCKCHPID_00064 69616 4 Skin 0.05 protein_coding synonymous_variant LOW 396C>T Ser132Ser
M0103405 GCKCHPID_00064 69631 5 Skin 0.06 protein_coding synonymous_variant LOW 381C>G Thr127Thr
M0103406 GCKCHPID_00064 69632 5 Skin 0.06 protein_coding missense_variant MODERATE 380C>T Thr127Ile
M0103407 GCKCHPID_00064 69633 5 Skin 0.06 protein_coding missense_variant MODERATE 379A>T Thr127Ser
M0103408 GCKCHPID_00064 69634 5 Skin 0.06 protein_coding synonymous_variant LOW 378G>A Leu126Leu
M0103409 GCKCHPID_00064 69640 5 Skin 0.06 protein_coding synonymous_variant LOW 372G>C Ala124Ala
M0103410 GCKCHPID_00064 69735 10 Skin 0.11 protein_coding missense_variant MODERATE 277C>T Arg93Trp
M0103411 GCKCHPID_00064 69985 14 Skin 0.16 protein_coding synonymous_variant LOW 27A>G Leu9Leu
M0103412 GCKCHPID_00065 70343 5 Skin 0.06 protein_coding missense_variant MODERATE 271G>C Glu91Gln
M0103413 GCKCHPID_00059 70405 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4344C>A None
M0103414 GCKCHPID_00059 70407 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4346A>C None
M0103415 GCKCHPID_00059 70409 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4348A>G None
M0103416 GCKCHPID_00059 70415 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4354C>T None
M0103417 GCKCHPID_00066 70757 6 Skin 0.07 protein_coding missense_variant MODERATE 676G>A Gly226Arg
M0103418 GCKCHPID_00067 71645 4 Skin 0.05 protein_coding missense_variant MODERATE 36A>T Lys12Asn
M0103419 GCKCHPID_00029 34689 3 Skin 0.03 protein_coding missense_variant MODERATE 100A>G Arg34Gly
M0103420 GCKCHPID_00029 34690 4 Skin 0.05 protein_coding missense_variant MODERATE 101G>A Arg34Lys
M0103421 GCKCHPID_00029 34694 3 Skin 0.03 protein_coding synonymous_variant LOW 105A>G Val35Val
M0103422 GCKCHPID_00029 34725 3 Skin 0.03 protein_coding synonymous_variant LOW 136T>C Leu46Leu
M0103423 GCKCHPID_00061 66983 5 Skin 0.06 protein_coding synonymous_variant LOW 621A>G Leu207Leu
M0103424 GCKCHPID_00061 66985 5 Skin 0.06 protein_coding synonymous_variant LOW 619C>T Leu207Leu
M0103425 GCKCHPID_00061 66987 5 Skin 0.06 protein_coding missense_variant MODERATE 617T>A Phe206Tyr
M0103426 GCKCHPID_00061 66989 5 Skin 0.06 protein_coding synonymous_variant LOW 615C>T Tyr205Tyr
M0103427 GCKCHPID_00061 66992 5 Skin 0.06 protein_coding synonymous_variant LOW 612G>T Gly204Gly
M0103428 GCKCHPID_00061 66998 5 Skin 0.06 protein_coding synonymous_variant LOW 606A>G Pro202Pro
M0103429 GCKCHPID_00061 67072 5 Skin 0.06 protein_coding missense_variant MODERATE 532A>C Met178Leu
M0103430 GCKCHPID_00061 67169 7 Skin 0.08 protein_coding synonymous_variant LOW 435G>C Pro145Pro
M0103431 GCKCHPID_00061 67178 3 Skin 0.03 protein_coding synonymous_variant LOW 426A>G Ala142Ala
M0103432 GCKCHPID_00061 67271 9 Skin 0.10 protein_coding synonymous_variant LOW 333T>C Cys111Cys
M0103433 GCKCHPID_00061 67331 13 Skin 0.15 protein_coding synonymous_variant LOW 273C>T Val91Val
M0103434 GCKCHPID_00061 67334 13 Skin 0.15 protein_coding synonymous_variant LOW 270T>G Leu90Leu
M0103435 GCKCHPID_00061 67337 13 Skin 0.15 protein_coding synonymous_variant LOW 267G>A Pro89Pro
M0103436 GCKCHPID_00061 67342 8 Skin 0.09 protein_coding synonymous_variant LOW 262C>T Leu88Leu
M0103437 GCKCHPID_00061 67364 7 Skin 0.08 protein_coding synonymous_variant LOW 240T>C Val80Val
M0103438 GCKCHPID_00061 67373 10 Skin 0.11 protein_coding synonymous_variant LOW 231T>G Gly77Gly
M0103439 GCKCHPID_00061 67460 5 Skin 0.06 protein_coding synonymous_variant LOW 144G>A Lys48Lys
M0103440 GCKCHPID_00061 67468 6 Skin 0.07 protein_coding missense_variant MODERATE 136G>C Ala46Pro
M0103441 GCKCHPID_00061 67487 6 Skin 0.07 protein_coding synonymous_variant LOW 117G>A Lys39Lys
M0103442 GCKCHPID_00061 67496 6 Skin 0.07 protein_coding synonymous_variant LOW 108A>G Gln36Gln
M0103443 GCKCHPID_00061 67502 8 Skin 0.09 protein_coding synonymous_variant LOW 102T>C Thr34Thr
M0103444 GCKCHPID_00061 67523 7 Skin 0.08 protein_coding synonymous_variant LOW 81A>G Glu27Glu
M0103445 GCKCHPID_00062 67608 3 Skin 0.03 protein_coding splice_region_variant&stop_retained_variant LOW 479G>A Ter160Ter
M0103446 GCKCHPID_00062 67634 11 Skin 0.13 protein_coding missense_variant MODERATE 453G>C Glu151Asp
M0103447 GCKCHPID_00062 67763 4 Skin 0.05 protein_coding synonymous_variant LOW 324T>C Ser108Ser
M0103448 GCKCHPID_00062 67889 17 Skin 0.20 protein_coding missense_variant MODERATE 198G>C Glu66Asp
M0103449 GCKCHPID_00062 67948 14 Skin 0.16 protein_coding missense_variant MODERATE 139A>C Ile47Leu
M0103450 GCKCHPID_00062 67949 12 Skin 0.14 protein_coding synonymous_variant LOW 138C>G Ser46Ser
M0103451 GCKCHPID_00062 67961 11 Skin 0.13 protein_coding synonymous_variant LOW 126G>C Val42Val
M0103452 GCKCHPID_00063 68569 15 Skin 0.17 protein_coding synonymous_variant LOW 42T>C Ser14Ser
M0103453 GCKCHPID_00063 68570 15 Skin 0.17 protein_coding missense_variant MODERATE 41G>C Ser14Thr
M0103454 GCKCHPID_00063 68583 15 Skin 0.17 protein_coding synonymous_variant LOW 28C>T Leu10Leu
M0103455 GCKCHPID_00063 68596 14 Skin 0.16 protein_coding synonymous_variant LOW 15G>A Pro5Pro
M0103456 GCKCHPID_00057 68623 13 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4451A>G None
M0103457 GCKCHPID_00057 68640 16 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4468T>C None
M0103458 GCKCHPID_00057 68641 16 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4469A>C None
M0103459 GCKCHPID_00057 68642 16 Skin 0.18 protein_coding upstream_gene_variant MODIFIER -4470T>C None
M0103460 GCKCHPID_00064 69175 5 Skin 0.06 protein_coding synonymous_variant LOW 837G>A Pro279Pro
M0103461 GCKCHPID_00064 69244 5 Skin 0.06 protein_coding synonymous_variant LOW 768A>G Ala256Ala
M0103462 GCKCHPID_00064 69777 6 Skin 0.07 protein_coding missense_variant MODERATE 235A>G Ile79Val
M0103463 GCKCHPID_00064 69781 6 Skin 0.07 protein_coding synonymous_variant LOW 231G>A Lys77Lys
M0103464 GCKCHPID_00064 69880 6 Skin 0.07 protein_coding synonymous_variant LOW 132T>C Asp44Asp
M0103465 GCKCHPID_00064 69882 6 Skin 0.07 protein_coding missense_variant MODERATE 130G>A Asp44Asn
M0103466 GCKCHPID_00064 69885 6 Skin 0.07 protein_coding missense_variant MODERATE 127A>G Met43Val
M0103467 GCKCHPID_00064 69888 6 Skin 0.07 protein_coding missense_variant MODERATE 124G>A Gly42Ser
M0103468 GCKCHPID_00064 69889 6 Skin 0.07 protein_coding synonymous_variant LOW 123T>C Ile41Ile
M0103469 GCKCHPID_00064 69892 6 Skin 0.07 protein_coding synonymous_variant LOW 120G>T Val40Val
M0103470 GCKCHPID_00064 69943 3 Skin 0.03 protein_coding synonymous_variant LOW 69C>T Gly23Gly
M0103471 GCKCHPID_00064 69975 4 Skin 0.05 protein_coding missense_variant MODERATE 37A>G Ile13Val
M0103472 GCKCHPID_00059 70037 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3976A>G None
M0103473 GCKCHPID_00065 70093 5 Skin 0.06 protein_coding synonymous_variant LOW 21G>A Pro7Pro
M0103474 GCKCHPID_00065 70108 8 Skin 0.09 protein_coding synonymous_variant LOW 36A>G Lys12Lys
M0103475 GCKCHPID_00065 70112 8 Skin 0.09 protein_coding synonymous_variant LOW 40T>C Leu14Leu
M0103476 GCKCHPID_00065 70114 8 Skin 0.09 protein_coding missense_variant MODERATE 42G>C Leu14Phe
M0103477 GCKCHPID_00065 70117 9 Skin 0.10 protein_coding synonymous_variant LOW 45C>T Gly15Gly
M0103478 GCKCHPID_00065 70331 4 Skin 0.05 protein_coding missense_variant MODERATE 259A>G Thr87Ala
M0103479 GCKCHPID_00065 70336 5 Skin 0.06 protein_coding synonymous_variant LOW 264T>G Ala88Ala
M0103480 GCKCHPID_00059 70464 8 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -4403C>A None
M0103481 GCKCHPID_00059 70469 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4408C>A None
M0103482 GCKCHPID_00059 70471 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4410A>T None
M0103483 GCKCHPID_00060 71721 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4901C>T None
M0103484 GCKCHPID_00061 67186 10 Skin 0.11 protein_coding missense_variant MODERATE 418C>A Leu140Met
M0103485 GCKCHPID_00061 67187 10 Skin 0.11 protein_coding synonymous_variant LOW 417A>G Ser139Ser
M0103486 GCKCHPID_00061 67317 3 Skin 0.03 protein_coding missense_variant MODERATE 287G>T Ser96Ile
M0103487 GCKCHPID_00061 67505 4 Skin 0.05 protein_coding synonymous_variant LOW 99C>T Pro33Pro
M0103488 GCKCHPID_00061 67538 9 Skin 0.10 protein_coding missense_variant MODERATE 66A>G Ile22Met
M0103489 GCKCHPID_00061 67541 8 Skin 0.09 protein_coding synonymous_variant LOW 63G>C Ser21Ser
M0103490 GCKCHPID_00061 67544 4 Skin 0.05 protein_coding synonymous_variant LOW 60A>G Leu20Leu
M0103491 GCKCHPID_00061 67550 5 Skin 0.06 protein_coding missense_variant MODERATE 54A>T Lys18Asn
M0103492 GCKCHPID_00061 67569 4 Skin 0.05 protein_coding missense_variant MODERATE 35C>T Pro12Leu
M0103493 GCKCHPID_00059 66055 3 Skin 0.03 protein_coding missense_variant MODERATE 7C>A His3Asn
M0103494 GCKCHPID_00054 66317 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3735A>G None
M0103495 GCKCHPID_00054 66320 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3738C>G None
M0103496 GCKCHPID_00060 66412 3 Skin 0.03 protein_coding missense_variant MODERATE 409C>T Pro137Ser
M0103497 GCKCHPID_00060 66413 4 Skin 0.05 protein_coding synonymous_variant LOW 408G>A Gln136Gln
M0103498 GCKCHPID_00060 66479 5 Skin 0.06 protein_coding synonymous_variant LOW 342T>C Asp114Asp
M0103499 GCKCHPID_00061 67265 3 Skin 0.03 protein_coding synonymous_variant LOW 339C>T Gly113Gly
M0103500 GCKCHPID_00061 67540 5 Skin 0.06 protein_coding missense_variant MODERATE 64A>C Ile22Leu
M0103501 GCKCHPID_00063 68445 10 Skin 0.11 protein_coding missense_variant MODERATE 166C>T His56Tyr
M0103502 GCKCHPID_00064 68857 10 Skin 0.11 protein_coding synonymous_variant LOW 1155A>G Leu385Leu
M0103503 GCKCHPID_00064 68859 10 Skin 0.11 protein_coding synonymous_variant LOW 1153T>C Leu385Leu
M0103504 GCKCHPID_00064 69136 6 Skin 0.07 protein_coding synonymous_variant LOW 876G>C Val292Val
M0103505 GCKCHPID_00059 70618 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4557G>A None
M0103506 GCKCHPID_00059 70664 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4603T>C None
M0103507 GCKCHPID_00059 70681 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4620A>G None
M0103508 GCKCHPID_00060 66605 4 Skin 0.05 protein_coding missense_variant MODERATE 216C>A Asp72Glu
M0103509 GCKCHPID_00061 66887 5 Skin 0.06 protein_coding synonymous_variant LOW 717A>G Glu239Glu
M0103510 GCKCHPID_00061 66890 5 Skin 0.06 protein_coding synonymous_variant LOW 714T>C Val238Val
M0103511 GCKCHPID_00061 66928 3 Skin 0.03 protein_coding missense_variant MODERATE 676C>T His226Tyr
M0103512 GCKCHPID_00061 66958 3 Skin 0.03 protein_coding synonymous_variant LOW 646C>T Leu216Leu
M0103513 GCKCHPID_00061 66965 3 Skin 0.03 protein_coding synonymous_variant LOW 639C>T Val213Val
M0103514 GCKCHPID_00061 67247 4 Skin 0.05 protein_coding synonymous_variant LOW 357C>T Pro119Pro
M0103515 GCKCHPID_00061 67301 6 Skin 0.07 protein_coding synonymous_variant LOW 303C>G Val101Val
M0103516 GCKCHPID_00061 67346 4 Skin 0.05 protein_coding synonymous_variant LOW 258A>G Ala86Ala
M0103517 GCKCHPID_00062 67730 5 Skin 0.06 protein_coding missense_variant MODERATE 357A>T Gln119His
M0103518 GCKCHPID_00063 68224 5 Skin 0.06 protein_coding missense_variant MODERATE 387C>A Ser129Arg
M0103519 GCKCHPID_00063 68518 4 Skin 0.05 protein_coding missense_variant MODERATE 93G>T Leu31Phe
M0103520 GCKCHPID_00064 69234 3 Skin 0.03 protein_coding synonymous_variant LOW 778C>T Leu260Leu
M0103521 GCKCHPID_00064 69235 3 Skin 0.03 protein_coding synonymous_variant LOW 777G>A Leu259Leu
M0103522 GCKCHPID_00064 69241 3 Skin 0.03 protein_coding synonymous_variant LOW 771A>G Leu257Leu
M0103523 GCKCHPID_00064 69274 3 Skin 0.03 protein_coding synonymous_variant LOW 738G>A Val246Val
M0103524 GCKCHPID_00064 69277 3 Skin 0.03 protein_coding synonymous_variant LOW 735T>C Gly245Gly
M0103525 GCKCHPID_00061 67308 3 Skin 0.03 protein_coding missense_variant MODERATE 296C>T Pro99Leu
M0103526 GCKCHPID_00061 67313 3 Skin 0.03 protein_coding synonymous_variant LOW 291A>G Gln97Gln
M0103527 GCKCHPID_00061 67319 3 Skin 0.03 protein_coding synonymous_variant LOW 285C>T Asp95Asp
M0103528 GCKCHPID_00061 67361 3 Skin 0.03 protein_coding synonymous_variant LOW 243G>A Lys81Lys
M0103529 GCKCHPID_00062 67649 5 Skin 0.06 protein_coding synonymous_variant LOW 438A>G Lys146Lys
M0103530 GCKCHPID_00066 70821 3 Skin 0.03 protein_coding missense_variant MODERATE 612G>C Glu204Asp
M0103531 GCKCHPID_00066 70822 3 Skin 0.03 protein_coding missense_variant MODERATE 611A>C Glu204Ala
M0103532 GCKCHPID_00045 50981 3 Skin 0.03 protein_coding missense_variant MODERATE 1510G>T Ala504Ser
M0103533 GCKCHPID_00045 51045 3 Skin 0.03 protein_coding synonymous_variant LOW 1446T>C Asp482Asp
M0103534 GCKCHPID_00045 51060 3 Skin 0.03 protein_coding synonymous_variant LOW 1431C>T Asp477Asp
M0103535 GCKCHPID_00045 51497 3 Skin 0.03 protein_coding missense_variant MODERATE 994A>G Thr332Ala
M0103536 GCKCHPID_00045 51510 3 Skin 0.03 protein_coding synonymous_variant LOW 981A>G Glu327Glu
M0103537 GCKCHPID_00045 51551 3 Skin 0.03 protein_coding missense_variant MODERATE 940G>A Ala314Thr
M0103538 GCKCHPID_00045 51552 3 Skin 0.03 protein_coding synonymous_variant LOW 939T>C Ile313Ile
M0103539 GCKCHPID_00028 33578 3 Skin 0.03 protein_coding synonymous_variant LOW 450A>G Lys150Lys
M0103540 GCKCHPID_00028 33644 5 Skin 0.06 protein_coding synonymous_variant LOW 516A>G Leu172Leu
M0103541 GCKCHPID_00028 33668 4 Skin 0.05 protein_coding synonymous_variant LOW 540C>T His180His
M0103542 GCKCHPID_00039 42442 7 Skin 0.08 protein_coding missense_variant MODERATE 1651A>G Thr551Ala
M0103543 GCKCHPID_00039 43301 9 Skin 0.10 protein_coding synonymous_variant LOW 792C>T Val264Val
M0103544 GCKCHPID_00039 43538 8 Skin 0.09 protein_coding synonymous_variant LOW 555C>T Ser185Ser
M0103545 GCKCHPID_00039 43652 10 Skin 0.11 protein_coding synonymous_variant LOW 441A>G Leu147Leu
M0103546 GCKCHPID_00040 44998 7 Skin 0.08 protein_coding synonymous_variant LOW 123C>T Arg41Arg
M0103547 GCKCHPID_00040 45056 7 Skin 0.08 protein_coding missense_variant MODERATE 65T>A Ile22Asn
M0103548 GCKCHPID_00040 49735 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -4615A>T None
M0103549 GCKCHPID_00044 49915 3 Skin 0.03 protein_coding missense_variant MODERATE 476A>C Asp159Ala
M0103550 GCKCHPID_00045 50736 3 Skin 0.03 protein_coding synonymous_variant LOW 1755G>A Glu585Glu
M0103551 GCKCHPID_00040 44387 6 Skin 0.07 protein_coding missense_variant MODERATE 734G>A Ser245Asn
M0103552 GCKCHPID_00040 44713 6 Skin 0.07 protein_coding synonymous_variant LOW 408A>C Ser136Ser
M0103553 GCKCHPID_00040 44856 6 Skin 0.07 protein_coding missense_variant MODERATE 265C>T Pro89Ser
M0103554 GCKCHPID_00040 44955 6 Skin 0.07 protein_coding synonymous_variant LOW 166C>T Leu56Leu
M0103555 GCKCHPID_00040 44974 6 Skin 0.07 protein_coding synonymous_variant LOW 147G>C Thr49Thr
M0103556 GCKCHPID_00040 44982 6 Skin 0.07 protein_coding missense_variant MODERATE 139G>A Val47Met
M0103557 GCKCHPID_00040 45021 6 Skin 0.07 protein_coding missense_variant MODERATE 100T>C Ser34Pro
M0103558 GCKCHPID_00040 45043 6 Skin 0.07 protein_coding synonymous_variant LOW 78C>A Gly26Gly
M0103559 GCKCHPID_00041 45245 6 Skin 0.07 protein_coding missense_variant MODERATE 637G>A Asp213Asn
M0103560 GCKCHPID_00041 45312 6 Skin 0.07 protein_coding synonymous_variant LOW 570C>T Gly190Gly
M0103561 GCKCHPID_00054 66299 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3717C>T None
M0103562 GCKCHPID_00054 66307 4 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -3725T>C None
M0103563 GCKCHPID_00060 66748 5 Skin 0.06 protein_coding missense_variant MODERATE 73C>G Leu25Val
M0103564 GCKCHPID_00061 66866 3 Skin 0.03 protein_coding synonymous_variant LOW 738A>G Gln246Gln
M0103565 GCKCHPID_00061 66872 3 Skin 0.03 protein_coding synonymous_variant LOW 732C>G Leu244Leu
M0103566 GCKCHPID_00061 66874 3 Skin 0.03 protein_coding missense_variant MODERATE 730C>T Leu244Phe
M0103567 GCKCHPID_00061 66875 3 Skin 0.03 protein_coding synonymous_variant LOW 729A>G Glu243Glu
M0103568 GCKCHPID_00061 66876 3 Skin 0.03 protein_coding missense_variant MODERATE 728A>C Glu243Ala
M0103569 GCKCHPID_00061 66878 3 Skin 0.03 protein_coding synonymous_variant LOW 726G>A Glu242Glu
M0103570 GCKCHPID_00061 66896 3 Skin 0.03 protein_coding synonymous_variant LOW 708G>A Glu236Glu
M0103571 GCKCHPID_00061 66938 3 Skin 0.03 protein_coding synonymous_variant LOW 666C>G Leu222Leu
M0103572 GCKCHPID_00061 66940 3 Skin 0.03 protein_coding missense_variant MODERATE 664C>T Leu222Phe
M0103573 GCKCHPID_00061 67067 3 Skin 0.03 protein_coding synonymous_variant LOW 537T>C Leu179Leu
M0103574 GCKCHPID_00064 68884 3 Skin 0.03 protein_coding synonymous_variant LOW 1128C>T Ile376Ile
M0103575 GCKCHPID_00041 45428 8 Skin 0.09 protein_coding synonymous_variant LOW 454T>C Leu152Leu
M0103576 GCKCHPID_00041 45444 9 Skin 0.10 protein_coding synonymous_variant LOW 438G>T Ala146Ala
M0103577 GCKCHPID_00041 45543 6 Skin 0.07 protein_coding synonymous_variant LOW 339C>T Ala113Ala
M0103578 GCKCHPID_00042 46071 5 Skin 0.06 protein_coding synonymous_variant LOW 975G>A Leu325Leu
M0103579 GCKCHPID_00042 46692 8 Skin 0.09 protein_coding missense_variant MODERATE 354G>C Leu118Phe
M0103580 GCKCHPID_00042 46694 8 Skin 0.09 protein_coding synonymous_variant LOW 352T>C Leu118Leu
M0103581 GCKCHPID_00042 46697 8 Skin 0.09 protein_coding missense_variant MODERATE 349C>A Gln117Lys
M0103582 GCKCHPID_00042 46698 8 Skin 0.09 protein_coding synonymous_variant LOW 348T>C Arg116Arg
M0103583 GCKCHPID_00042 46866 5 Skin 0.06 protein_coding synonymous_variant LOW 180T>C Phe60Phe
M0103584 GCKCHPID_00039 47200 6 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3108G>C None
M0103585 GCKCHPID_00039 47277 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3185C>G None
M0103586 GCKCHPID_00043 47760 3 Skin 0.03 protein_coding synonymous_variant LOW 1896T>C Ala632Ala
M0103587 GCKCHPID_00043 47787 3 Skin 0.03 protein_coding synonymous_variant LOW 1869T>C Thr623Thr
M0103588 GCKCHPID_00043 47801 3 Skin 0.03 protein_coding missense_variant MODERATE 1855A>G Ile619Val
M0103589 GCKCHPID_00043 47802 3 Skin 0.03 protein_coding synonymous_variant LOW 1854C>T Val618Val
M0103590 GCKCHPID_00043 47811 3 Skin 0.03 protein_coding synonymous_variant LOW 1845T>C Asp615Asp
M0103591 GCKCHPID_00043 48417 3 Skin 0.03 protein_coding synonymous_variant LOW 1239A>G Leu413Leu
M0103592 GCKCHPID_00043 49053 3 Skin 0.03 protein_coding synonymous_variant LOW 603T>G Ala201Ala
M0103593 GCKCHPID_00041 45462 3 Skin 0.03 protein_coding synonymous_variant LOW 420T>C Gly140Gly
M0103594 GCKCHPID_00041 45492 3 Skin 0.03 protein_coding synonymous_variant LOW 390G>A Lys130Lys
M0103595 GCKCHPID_00043 48981 3 Skin 0.03 protein_coding synonymous_variant LOW 675A>G Gly225Gly
M0103596 GCKCHPID_00028 32629 3 Skin 0.03 protein_coding upstream_gene_variant MODIFIER -500A>C None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group
GCKCHPID_00061 Arsenic (As) 72.5 3.9e-87 47 253 0.8182 0.8922 experiment
GCKCHPID_00061 Arsenic (As) 74.7 1.2e-97 22 253 0.9209 0.9708 prediction






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
GCKCHPID_00026 PHI:3317 hsdR 74.6 0 1 1048 1.0000 1.0000 rodents Glasser's disease involved in pathogenicity reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term