Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C829
  Reference Plasmid   NZ_CP069435.1
  Reference Plasmid Size   64967
  Reference Plasmid GC Content   0.40
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0104094 FJKGAGIN_00066 57788 8 Skin 0.13 protein_coding synonymous_variant LOW 12A>G Leu4Leu
M0104095 FJKGAGIN_00066 57974 10 Skin 0.16 protein_coding synonymous_variant LOW 198A>G Lys66Lys
M0104096 FJKGAGIN_00066 57993 14 Skin 0.23 protein_coding missense_variant MODERATE 217T>C Ser73Pro
M0104097 FJKGAGIN_00058 58006 10 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -3364T>C None
M0104098 FJKGAGIN_00067 58097 6 Skin 0.10 protein_coding synonymous_variant LOW 72T>C Ser24Ser
M0104099 FJKGAGIN_00067 58127 14 Skin 0.23 protein_coding synonymous_variant LOW 102A>G Val34Val
M0104100 FJKGAGIN_00067 58136 5 Skin 0.08 protein_coding synonymous_variant LOW 111G>A Ala37Ala
M0104101 FJKGAGIN_00067 58197 6 Skin 0.10 protein_coding missense_variant MODERATE 172G>A Val58Ile
M0104102 FJKGAGIN_00067 58403 5 Skin 0.08 protein_coding synonymous_variant LOW 378T>C Pro126Pro
M0104103 FJKGAGIN_00067 58416 5 Skin 0.08 protein_coding synonymous_variant LOW 391T>C Leu131Leu
M0104104 FJKGAGIN_00067 58424 9 Skin 0.15 protein_coding synonymous_variant LOW 399C>T Gly133Gly
M0104105 FJKGAGIN_00067 58451 4 Skin 0.07 protein_coding synonymous_variant LOW 426A>G Leu142Leu
M0104106 FJKGAGIN_00067 58454 5 Skin 0.08 protein_coding synonymous_variant LOW 429T>C Gly143Gly
M0104107 FJKGAGIN_00067 58460 4 Skin 0.07 protein_coding synonymous_variant LOW 435A>C Thr145Thr
M0104108 FJKGAGIN_00067 58463 3 Skin 0.05 protein_coding synonymous_variant LOW 438C>T Val146Val
M0104109 FJKGAGIN_00067 58466 4 Skin 0.07 protein_coding synonymous_variant LOW 441A>T Ala147Ala
M0104110 FJKGAGIN_00067 58469 3 Skin 0.05 protein_coding synonymous_variant LOW 444C>T Asp148Asp
M0104111 FJKGAGIN_00067 58475 3 Skin 0.05 protein_coding synonymous_variant LOW 450T>C Asn150Asn
M0104112 FJKGAGIN_00067 59261 3 Skin 0.05 protein_coding synonymous_variant LOW 1236T>C Thr412Thr
M0104113 FJKGAGIN_00034 34864 3 Skin 0.05 protein_coding synonymous_variant LOW 495C>A Val165Val
M0104114 FJKGAGIN_00036 35381 3 Skin 0.05 protein_coding synonymous_variant LOW 123C>T Leu41Leu
M0104115 FJKGAGIN_00036 35579 3 Skin 0.05 protein_coding synonymous_variant LOW 321G>A Leu107Leu
M0104116 FJKGAGIN_00036 35931 4 Skin 0.07 protein_coding missense_variant MODERATE 673T>A Ser225Thr
M0104117 FJKGAGIN_00036 36620 4 Skin 0.07 protein_coding synonymous_variant LOW 1362T>A Ser454Ser
M0104118 FJKGAGIN_00037 36700 4 Skin 0.07 protein_coding missense_variant MODERATE 22T>C Tyr8His
M0104119 FJKGAGIN_00037 36702 4 Skin 0.07 protein_coding synonymous_variant LOW 24T>C Tyr8Tyr
M0104120 FJKGAGIN_00037 36716 4 Skin 0.07 protein_coding missense_variant MODERATE 38C>G Ser13Trp
M0104121 FJKGAGIN_00037 36727 4 Skin 0.07 protein_coding missense_variant MODERATE 49T>G Leu17Val
M0104122 FJKGAGIN_00037 36735 3 Skin 0.05 protein_coding synonymous_variant LOW 57A>G Leu19Leu
M0104123 FJKGAGIN_00037 36738 3 Skin 0.05 protein_coding synonymous_variant LOW 60C>A Gly20Gly
M0104124 FJKGAGIN_00037 37083 4 Skin 0.07 protein_coding missense_variant MODERATE 405A>T Glu135Asp
M0104125 FJKGAGIN_00037 37086 4 Skin 0.07 protein_coding synonymous_variant LOW 408C>T Gly136Gly
M0104126 FJKGAGIN_00032 32359 3 Skin 0.05 protein_coding missense_variant MODERATE 497T>G Phe166Cys
M0104127 FJKGAGIN_00032 32380 4 Skin 0.07 protein_coding missense_variant MODERATE 518C>A Thr173Asn
M0104128 FJKGAGIN_00032 32667 3 Skin 0.05 protein_coding missense_variant MODERATE 805T>G Ser269Ala
M0104129 FJKGAGIN_00032 32792 3 Skin 0.05 protein_coding synonymous_variant LOW 930C>T Thr310Thr
M0104130 FJKGAGIN_00033 32954 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -57C>T None
M0104131 FJKGAGIN_00033 32967 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -44G>A None
M0104132 FJKGAGIN_00033 33199 3 Skin 0.05 protein_coding synonymous_variant LOW 189C>A Ala63Ala
M0104133 FJKGAGIN_00033 33243 3 Skin 0.05 protein_coding missense_variant MODERATE 233G>C Ser78Thr
M0104134 FJKGAGIN_00037 36806 3 Skin 0.05 protein_coding missense_variant MODERATE 128T>G Val43Gly
M0104135 FJKGAGIN_00037 37494 3 Skin 0.05 protein_coding synonymous_variant LOW 816T>C Ala272Ala
M0104136 FJKGAGIN_00037 37518 3 Skin 0.05 protein_coding synonymous_variant LOW 840T>C Asp280Asp
M0104137 FJKGAGIN_00001 2155 5 Skin 0.08 protein_coding missense_variant MODERATE 1364G>A Arg455Lys
M0104138 FJKGAGIN_00002 2357 3 Skin 0.05 protein_coding missense_variant MODERATE 102G>C Lys34Asn
M0104139 FJKGAGIN_00002 2432 5 Skin 0.08 protein_coding synonymous_variant LOW 177G>C Ala59Ala
M0104140 FJKGAGIN_00002 2855 6 Skin 0.10 protein_coding synonymous_variant LOW 600C>T Ala200Ala
M0104141 FJKGAGIN_00066 57968 5 Skin 0.08 protein_coding synonymous_variant LOW 192C>T Phe64Phe
M0104142 FJKGAGIN_00067 58142 3 Skin 0.05 protein_coding synonymous_variant LOW 117C>T Phe39Phe
M0104143 FJKGAGIN_00067 58169 4 Skin 0.07 protein_coding synonymous_variant LOW 144G>T Ala48Ala
M0104144 FJKGAGIN_00067 58256 4 Skin 0.07 protein_coding synonymous_variant LOW 231G>A Ala77Ala
M0104145 FJKGAGIN_00067 58319 3 Skin 0.05 protein_coding synonymous_variant LOW 294T>C Ala98Ala
M0104146 FJKGAGIN_00067 58601 3 Skin 0.05 protein_coding synonymous_variant LOW 576C>T Gly192Gly
M0104147 FJKGAGIN_00067 58678 3 Skin 0.05 protein_coding missense_variant MODERATE 653C>G Thr218Ser
M0104148 FJKGAGIN_00067 58679 3 Skin 0.05 protein_coding synonymous_variant LOW 654C>T Thr218Thr
M0104149 FJKGAGIN_00067 58682 7 Skin 0.11 protein_coding synonymous_variant LOW 657A>T Val219Val
M0104150 FJKGAGIN_00067 58712 4 Skin 0.07 protein_coding synonymous_variant LOW 687A>G Ser229Ser
M0104151 FJKGAGIN_00067 58802 5 Skin 0.08 protein_coding synonymous_variant LOW 777T>C Tyr259Tyr
M0104152 FJKGAGIN_00067 58835 3 Skin 0.05 protein_coding synonymous_variant LOW 810T>C Asn270Asn
M0104153 FJKGAGIN_00067 58847 4 Skin 0.07 protein_coding synonymous_variant LOW 822T>C Asp274Asp
M0104154 FJKGAGIN_00067 58859 5 Skin 0.08 protein_coding missense_variant MODERATE 834G>C Met278Ile
M0104155 FJKGAGIN_00067 58916 9 Skin 0.15 protein_coding synonymous_variant LOW 891C>G Ala297Ala
M0104156 FJKGAGIN_00067 58940 5 Skin 0.08 protein_coding synonymous_variant LOW 915T>G Ser305Ser
M0104157 FJKGAGIN_00067 59009 3 Skin 0.05 protein_coding synonymous_variant LOW 984G>T Leu328Leu
M0104158 FJKGAGIN_00067 59283 6 Skin 0.10 protein_coding synonymous_variant LOW 1258T>C Leu420Leu
M0104159 FJKGAGIN_00067 59311 4 Skin 0.07 protein_coding missense_variant MODERATE 1286C>T Thr429Met
M0104160 FJKGAGIN_00067 59315 3 Skin 0.05 protein_coding synonymous_variant LOW 1290A>G Leu430Leu
M0104161 FJKGAGIN_00067 59327 3 Skin 0.05 protein_coding synonymous_variant LOW 1302T>C His434His
M0104162 FJKGAGIN_00067 59357 3 Skin 0.05 protein_coding synonymous_variant LOW 1332C>T Ser444Ser
M0104163 FJKGAGIN_00067 59361 3 Skin 0.05 protein_coding missense_variant MODERATE 1336A>G Thr446Ala
M0104164 FJKGAGIN_00067 59363 3 Skin 0.05 protein_coding synonymous_variant LOW 1338A>G Thr446Thr
M0104165 FJKGAGIN_00001 582 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -210T>A None
M0104166 FJKGAGIN_00001 754 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -38G>A None
M0104167 FJKGAGIN_00001 755 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -37G>A None
M0104168 FJKGAGIN_00001 798 3 Skin 0.05 protein_coding missense_variant MODERATE 7C>T His3Tyr
M0104169 FJKGAGIN_00001 799 3 Skin 0.05 protein_coding missense_variant MODERATE 8A>C His3Pro
M0104170 FJKGAGIN_00001 805 3 Skin 0.05 protein_coding missense_variant MODERATE 14G>A Arg5Lys
M0104171 FJKGAGIN_00001 991 3 Skin 0.05 protein_coding missense_variant MODERATE 200C>G Ser67Cys
M0104172 FJKGAGIN_00001 1160 3 Skin 0.05 protein_coding synonymous_variant LOW 369G>T Pro123Pro
M0104173 FJKGAGIN_00001 1325 4 Skin 0.07 protein_coding synonymous_variant LOW 534C>T Asp178Asp
M0104174 FJKGAGIN_00002 2980 4 Skin 0.07 protein_coding missense_variant MODERATE 725G>A Gly242Asp
M0104175 FJKGAGIN_00065 57546 3 Skin 0.05 protein_coding missense_variant MODERATE 58T>C Cys20Arg
M0104176 FJKGAGIN_00065 57588 3 Skin 0.05 protein_coding missense_variant MODERATE 16A>G Ile6Val
M0104177 FJKGAGIN_00067 58190 3 Skin 0.05 protein_coding synonymous_variant LOW 165C>T Asp55Asp
M0104178 FJKGAGIN_00067 58595 11 Skin 0.18 protein_coding synonymous_variant LOW 570T>C Asn190Asn
M0104179 FJKGAGIN_00067 59195 6 Skin 0.10 protein_coding synonymous_variant LOW 1170G>A Leu390Leu
M0104180 FJKGAGIN_00067 59390 3 Skin 0.05 protein_coding synonymous_variant LOW 1365T>C Val455Val
M0104181 FJKGAGIN_00067 59400 4 Skin 0.07 protein_coding missense_variant MODERATE 1375C>G Gln459Glu
M0104182 FJKGAGIN_00069 60132 6 Skin 0.10 protein_coding synonymous_variant LOW 90G>A Gln30Gln
M0104183 FJKGAGIN_00069 60135 7 Skin 0.11 protein_coding synonymous_variant LOW 93A>G Ala31Ala
M0104184 FJKGAGIN_00069 60141 7 Skin 0.11 protein_coding synonymous_variant LOW 99G>A Lys33Lys
M0104185 FJKGAGIN_00069 60207 3 Skin 0.05 protein_coding synonymous_variant LOW 165T>C Ser55Ser
M0104186 FJKGAGIN_00070 60296 3 Skin 0.05 protein_coding synonymous_variant LOW 6C>T Ser2Ser
M0104187 FJKGAGIN_00070 60299 3 Skin 0.05 protein_coding synonymous_variant LOW 9G>A Lys3Lys
M0104188 FJKGAGIN_00070 60368 4 Skin 0.07 protein_coding synonymous_variant LOW 78T>G Val26Val
M0104189 FJKGAGIN_00070 60440 4 Skin 0.07 protein_coding synonymous_variant LOW 150G>A Arg50Arg
M0104190 FJKGAGIN_00064 61800 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4541A>G None
M0104191 FJKGAGIN_00064 61804 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4545G>A None
M0104192 FJKGAGIN_00064 61812 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4553T>A None
M0104193 FJKGAGIN_00064 61814 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4555A>G None
M0104194 FJKGAGIN_00064 61816 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4557A>T None
M0104195 FJKGAGIN_00064 61818 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4559T>A None
M0104196 FJKGAGIN_00064 61820 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4561T>C None
M0104197 FJKGAGIN_00064 61843 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4584G>A None
M0104198 FJKGAGIN_00064 61849 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4590G>A None
M0104199 FJKGAGIN_00073 61866 3 Skin 0.05 protein_coding missense_variant MODERATE 101G>A Ser34Asn
M0104200 FJKGAGIN_00073 61869 3 Skin 0.05 protein_coding missense_variant MODERATE 98A>C Tyr33Ser
M0104201 FJKGAGIN_00073 61871 3 Skin 0.05 protein_coding synonymous_variant LOW 96G>A Leu32Leu
M0104202 FJKGAGIN_00073 61879 5 Skin 0.08 protein_coding missense_variant MODERATE 88G>A Val30Ile
M0104203 FJKGAGIN_00073 61956 5 Skin 0.08 protein_coding missense_variant MODERATE 11A>C Tyr4Ser
M0104204 FJKGAGIN_00064 61971 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4712T>G None
M0104205 FJKGAGIN_00064 62058 7 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4799A>G None
M0104206 FJKGAGIN_00064 62089 7 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4830T>C None
M0104207 FJKGAGIN_00064 62099 7 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4840A>G None
M0104208 FJKGAGIN_00064 62158 7 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -4899T>C None
M0104209 FJKGAGIN_00065 62358 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4755G>A None
M0104210 FJKGAGIN_00073 63563 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -1597C>T None
M0104211 FJKGAGIN_00073 63749 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1783T>C None
M0104212 FJKGAGIN_00073 63810 9 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -1844T>C None
M0104213 FJKGAGIN_00073 63858 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -1892A>G None
M0104214 FJKGAGIN_00073 63994 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2028A>G None
M0104215 FJKGAGIN_00073 64134 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2168A>G None
M0104216 FJKGAGIN_00073 64359 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2393T>G None
M0104217 FJKGAGIN_00073 64360 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2394C>T None
M0104218 FJKGAGIN_00073 64362 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2396G>A None
M0104219 FJKGAGIN_00073 64363 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2397G>A None
M0104220 FJKGAGIN_00073 64368 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2402A>G None
M0104221 FJKGAGIN_00073 64410 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2444C>T None
M0104222 FJKGAGIN_00073 64416 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2450G>A None
M0104223 FJKGAGIN_00073 64479 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2513A>C None
M0104224 FJKGAGIN_00073 64818 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2852G>A None
M0104225 FJKGAGIN_00073 64821 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -2855G>A None
M0104226 FJKGAGIN_00073 64878 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2912C>G None
M0104227 FJKGAGIN_00073 64896 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2930A>G None
M0104228 FJKGAGIN_00068 59572 8 Skin 0.13 protein_coding synonymous_variant LOW 6T>A Ile2Ile
M0104229 FJKGAGIN_00068 59851 3 Skin 0.05 protein_coding synonymous_variant LOW 285T>G Leu95Leu
M0104230 FJKGAGIN_00069 60156 6 Skin 0.10 protein_coding synonymous_variant LOW 114T>G Ser38Ser
M0104231 FJKGAGIN_00069 60162 5 Skin 0.08 protein_coding synonymous_variant LOW 120C>T Thr40Thr
M0104232 FJKGAGIN_00039 39470 3 Skin 0.05 protein_coding synonymous_variant LOW 462A>G Val154Val
M0104233 FJKGAGIN_00039 39559 3 Skin 0.05 protein_coding missense_variant MODERATE 373T>G Tyr125Asp
M0104234 FJKGAGIN_00039 39740 3 Skin 0.05 protein_coding synonymous_variant LOW 192G>A Gly64Gly
M0104235 FJKGAGIN_00039 39745 3 Skin 0.05 protein_coding missense_variant MODERATE 187A>G Ile63Val
M0104236 FJKGAGIN_00040 40048 4 Skin 0.07 protein_coding synonymous_variant LOW 927A>G Glu309Glu
M0104237 FJKGAGIN_00040 40288 4 Skin 0.07 protein_coding synonymous_variant LOW 687C>T Gly229Gly
M0104238 FJKGAGIN_00040 40516 4 Skin 0.07 protein_coding synonymous_variant LOW 459T>C Asn153Asn
M0104239 FJKGAGIN_00040 40583 3 Skin 0.05 protein_coding missense_variant MODERATE 392A>G Asn131Ser
M0104240 FJKGAGIN_00040 40600 3 Skin 0.05 protein_coding missense_variant MODERATE 375A>T Glu125Asp
M0104241 FJKGAGIN_00040 40607 3 Skin 0.05 protein_coding missense_variant MODERATE 368G>A Ser123Asn
M0104242 FJKGAGIN_00040 40616 3 Skin 0.05 protein_coding missense_variant MODERATE 359G>A Gly120Asp
M0104243 FJKGAGIN_00040 40622 4 Skin 0.07 protein_coding missense_variant MODERATE 353A>C Asp118Ala
M0104244 FJKGAGIN_00040 40630 3 Skin 0.05 protein_coding synonymous_variant LOW 345C>T Leu115Leu
M0104245 FJKGAGIN_00041 41265 3 Skin 0.05 protein_coding synonymous_variant LOW 723C>A Pro241Pro
M0104246 FJKGAGIN_00041 41274 3 Skin 0.05 protein_coding synonymous_variant LOW 714G>A Ala238Ala
M0104247 FJKGAGIN_00041 41655 3 Skin 0.05 protein_coding synonymous_variant LOW 333C>T Phe111Phe
M0104248 FJKGAGIN_00058 57672 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -3030T>C None
M0104249 FJKGAGIN_00067 58433 5 Skin 0.08 protein_coding synonymous_variant LOW 408T>C Asp136Asp
M0104250 FJKGAGIN_00068 59965 3 Skin 0.05 protein_coding synonymous_variant LOW 399C>G Pro133Pro
M0104251 FJKGAGIN_00070 60338 3 Skin 0.05 protein_coding synonymous_variant LOW 48G>T Ala16Ala
M0104252 FJKGAGIN_00064 62012 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4753G>T None
M0104253 FJKGAGIN_00064 62022 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4763A>G None
M0104254 FJKGAGIN_00064 62023 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4764G>A None
M0104255 FJKGAGIN_00065 62261 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4658A>G None
M0104256 FJKGAGIN_00065 62266 6 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4663C>T None
M0104257 FJKGAGIN_00073 62880 7 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -914A>G None
M0104258 FJKGAGIN_00073 62907 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -941G>A None
M0104259 FJKGAGIN_00073 62910 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -944C>A None
M0104260 FJKGAGIN_00073 62914 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -948G>T None
M0104261 FJKGAGIN_00073 62916 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -950T>A None
M0104262 FJKGAGIN_00073 62934 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -968G>C None
M0104263 FJKGAGIN_00073 62936 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -970T>A None
M0104264 FJKGAGIN_00073 62949 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -983G>C None
M0104265 FJKGAGIN_00073 63106 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1140C>T None
M0104266 FJKGAGIN_00073 63141 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1175C>T None
M0104267 FJKGAGIN_00073 63261 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -1295A>G None
M0104268 FJKGAGIN_00073 63354 7 Skin 0.11 protein_coding upstream_gene_variant MODIFIER -1388T>C None
M0104269 FJKGAGIN_00073 63387 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1421C>T None
M0104270 FJKGAGIN_00073 63840 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -1874G>A None
M0104271 FJKGAGIN_00012 8853 3 Skin 0.05 protein_coding missense_variant MODERATE 560G>T Arg187Leu
M0104272 FJKGAGIN_00012 8908 3 Skin 0.05 protein_coding missense_variant MODERATE 505A>G Lys169Glu
M0104273 FJKGAGIN_00012 9079 3 Skin 0.05 protein_coding missense_variant MODERATE 334C>T His112Tyr
M0104274 FJKGAGIN_00066 57924 5 Skin 0.08 protein_coding synonymous_variant LOW 148T>C Leu50Leu
M0104275 FJKGAGIN_00066 57929 5 Skin 0.08 protein_coding synonymous_variant LOW 153C>T Cys51Cys
M0104276 FJKGAGIN_00066 57944 4 Skin 0.07 protein_coding synonymous_variant LOW 168C>T Cys56Cys
M0104277 FJKGAGIN_00066 57956 4 Skin 0.07 protein_coding synonymous_variant LOW 180T>C Asp60Asp
M0104278 FJKGAGIN_00067 58038 3 Skin 0.05 protein_coding synonymous_variant LOW 13T>C Leu5Leu
M0104279 FJKGAGIN_00067 58039 3 Skin 0.05 protein_coding stop_gained HIGH 14T>A Leu5*
M0104280 FJKGAGIN_00067 58760 6 Skin 0.10 protein_coding synonymous_variant LOW 735C>T Ile245Ile
M0104281 FJKGAGIN_00067 58763 3 Skin 0.05 protein_coding synonymous_variant LOW 738A>G Glu246Glu
M0104282 FJKGAGIN_00067 58766 6 Skin 0.10 protein_coding synonymous_variant LOW 741G>A Glu247Glu
M0104283 FJKGAGIN_00067 58769 6 Skin 0.10 protein_coding synonymous_variant LOW 744A>T Gly248Gly
M0104284 FJKGAGIN_00067 58778 3 Skin 0.05 protein_coding synonymous_variant LOW 753G>A Gly251Gly
M0104285 FJKGAGIN_00067 58509 3 Skin 0.05 protein_coding missense_variant MODERATE 484G>A Asp162Asn
M0104286 FJKGAGIN_00067 58853 4 Skin 0.07 protein_coding synonymous_variant LOW 828C>T Phe276Phe
M0104287 FJKGAGIN_00067 58865 4 Skin 0.07 protein_coding synonymous_variant LOW 840G>C Leu280Leu
M0104288 FJKGAGIN_00067 58871 3 Skin 0.05 protein_coding synonymous_variant LOW 846T>C Asp282Asp
M0104289 FJKGAGIN_00067 58875 3 Skin 0.05 protein_coding synonymous_variant LOW 850T>C Leu284Leu
M0104290 FJKGAGIN_00067 58877 3 Skin 0.05 protein_coding synonymous_variant LOW 852G>A Leu284Leu
M0104291 FJKGAGIN_00068 59689 3 Skin 0.05 protein_coding synonymous_variant LOW 123C>T Arg41Arg
M0104292 FJKGAGIN_00073 62892 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -926T>C None
M0104293 FJKGAGIN_00073 63738 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -1772T>C None
M0104294 FJKGAGIN_00030 29089 3 Skin 0.05 protein_coding synonymous_variant LOW 1233T>C Asn411Asn
M0104295 FJKGAGIN_00030 29322 4 Skin 0.07 protein_coding missense_variant MODERATE 1466T>C Ile489Thr
M0104296 FJKGAGIN_00030 29325 4 Skin 0.07 protein_coding missense_variant MODERATE 1469A>C Asp490Ala
M0104297 FJKGAGIN_00030 29347 4 Skin 0.07 protein_coding missense_variant MODERATE 1491T>G Asn497Lys
M0104298 FJKGAGIN_00030 29370 4 Skin 0.07 protein_coding missense_variant MODERATE 1514T>C Val505Ala
M0104299 FJKGAGIN_00026 29423 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -4809T>C None
M0104300 FJKGAGIN_00031 29629 4 Skin 0.07 protein_coding synonymous_variant LOW 204T>C Val68Val
M0104301 FJKGAGIN_00031 29719 4 Skin 0.07 protein_coding synonymous_variant LOW 294T>C Ser98Ser
M0104302 FJKGAGIN_00031 29876 3 Skin 0.05 protein_coding missense_variant MODERATE 451A>C Ile151Leu
M0104303 FJKGAGIN_00031 29935 3 Skin 0.05 protein_coding missense_variant MODERATE 510A>G Ile170Met
M0104304 FJKGAGIN_00031 29944 4 Skin 0.07 protein_coding synonymous_variant LOW 519T>C Val173Val
M0104305 FJKGAGIN_00067 59090 3 Skin 0.05 protein_coding synonymous_variant LOW 1065C>G Val355Val
M0104306 FJKGAGIN_00064 62166 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4907A>C None
M0104307 FJKGAGIN_00064 62168 5 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4909A>G None
M0104308 FJKGAGIN_00073 63459 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -1493T>G None
M0104309 FJKGAGIN_00073 63462 4 Skin 0.07 protein_coding upstream_gene_variant MODIFIER -1496T>C None
M0104310 FJKGAGIN_00073 64377 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -2411G>A None
M0104311 FJKGAGIN_00064 62064 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4805A>G None
M0104312 FJKGAGIN_00040 40726 3 Skin 0.05 protein_coding synonymous_variant LOW 249A>G Lys83Lys
M0104313 FJKGAGIN_00040 40849 3 Skin 0.05 protein_coding synonymous_variant LOW 126G>A Glu42Glu
M0104314 FJKGAGIN_00040 40940 3 Skin 0.05 protein_coding missense_variant MODERATE 35T>C Leu12Ser
M0104315 FJKGAGIN_00041 41475 3 Skin 0.05 protein_coding synonymous_variant LOW 513T>C Pro171Pro
M0104316 FJKGAGIN_00026 29399 3 Skin 0.05 protein_coding upstream_gene_variant MODIFIER -4785A>G None
M0104317 FJKGAGIN_00031 29531 3 Skin 0.05 protein_coding missense_variant MODERATE 106G>A Val36Ile






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
FJKGAGIN_00041 ATQ84332.1|CE4 97.6 5.62e-251 1 330 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term