Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C837
  Reference Plasmid   NZ_CP069521.1
  Reference Plasmid Size   43772
  Reference Plasmid GC Content   0.42
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0184311 DBFIKJAC_00021 14532 4 Gut 0.67 protein_coding missense_variant MODERATE 194A>T Tyr65Phe
M0184312 DBFIKJAC_00022 15283 3 Gut 0.50 protein_coding synonymous_variant LOW 606G>A Gly202Gly
M0184313 DBFIKJAC_00022 15340 3 Gut 0.50 protein_coding synonymous_variant LOW 549G>A Lys183Lys
M0184314 DBFIKJAC_00022 15354 4 Gut 0.67 protein_coding synonymous_variant LOW 535C>T Leu179Leu
M0184315 DBFIKJAC_00022 15357 4 Gut 0.67 protein_coding missense_variant MODERATE 532G>A Ala178Thr
M0184316 DBFIKJAC_00022 15391 3 Gut 0.50 protein_coding synonymous_variant LOW 498T>C Gly166Gly
M0184317 DBFIKJAC_00022 15400 4 Gut 0.67 protein_coding synonymous_variant LOW 489T>A Thr163Thr
M0184318 DBFIKJAC_00022 15433 3 Gut 0.50 protein_coding synonymous_variant LOW 456T>C Ala152Ala
M0184319 DBFIKJAC_00022 15436 3 Gut 0.50 protein_coding synonymous_variant LOW 453A>G Thr151Thr
M0184320 DBFIKJAC_00022 15475 3 Gut 0.50 protein_coding synonymous_variant LOW 414C>G Thr138Thr
M0184321 DBFIKJAC_00022 15484 3 Gut 0.50 protein_coding synonymous_variant LOW 405A>G Val135Val
M0184322 DBFIKJAC_00022 15488 4 Gut 0.67 protein_coding missense_variant MODERATE 401T>A Leu134Gln
M0184323 DBFIKJAC_00022 15490 3 Gut 0.50 protein_coding synonymous_variant LOW 399G>A Gln133Gln
M0184324 DBFIKJAC_00022 15586 4 Gut 0.67 protein_coding synonymous_variant LOW 303C>T Gly101Gly
M0184325 DBFIKJAC_00022 15640 4 Gut 0.67 protein_coding synonymous_variant LOW 249A>C Leu83Leu
M0184326 DBFIKJAC_00022 15694 3 Gut 0.50 protein_coding missense_variant MODERATE 195G>A Met65Ile
M0184327 DBFIKJAC_00022 15697 4 Gut 0.67 protein_coding synonymous_variant LOW 192T>C Tyr64Tyr
M0184328 DBFIKJAC_00022 15784 4 Gut 0.67 protein_coding synonymous_variant LOW 105C>T Pro35Pro
M0184329 DBFIKJAC_00022 15822 3 Gut 0.50 protein_coding synonymous_variant LOW 67T>C Leu23Leu
M0184330 DBFIKJAC_00023 15950 4 Gut 0.67 protein_coding missense_variant MODERATE 2587C>T Pro863Ser
M0184331 DBFIKJAC_00023 15985 4 Gut 0.67 protein_coding missense_variant MODERATE 2552T>C Ile851Thr
M0184332 DBFIKJAC_00023 16004 4 Gut 0.67 protein_coding missense_variant MODERATE 2533A>G Lys845Glu
M0184333 DBFIKJAC_00023 16005 4 Gut 0.67 protein_coding synonymous_variant LOW 2532T>G Pro844Pro
M0184334 DBFIKJAC_00023 16012 4 Gut 0.67 protein_coding missense_variant MODERATE 2525T>C Leu842Pro
M0184335 DBFIKJAC_00023 16020 4 Gut 0.67 protein_coding synonymous_variant LOW 2517T>G Pro839Pro
M0184336 DBFIKJAC_00023 16031 4 Gut 0.67 protein_coding missense_variant MODERATE 2506G>A Ala836Thr
M0184337 DBFIKJAC_00023 16035 4 Gut 0.67 protein_coding synonymous_variant LOW 2502T>G Pro834Pro
M0184338 DBFIKJAC_00023 16041 4 Gut 0.67 protein_coding synonymous_variant LOW 2496A>G Pro832Pro
M0184339 DBFIKJAC_00023 16065 4 Gut 0.67 protein_coding synonymous_variant LOW 2472G>A Pro824Pro
M0184340 DBFIKJAC_00023 16074 4 Gut 0.67 protein_coding synonymous_variant LOW 2463C>T Ser821Ser
M0184341 DBFIKJAC_00023 16155 4 Gut 0.67 protein_coding synonymous_variant LOW 2382A>G Gln794Gln
M0184342 DBFIKJAC_00023 16170 4 Gut 0.67 protein_coding synonymous_variant LOW 2367C>T Asn789Asn
M0184343 DBFIKJAC_00023 16200 4 Gut 0.67 protein_coding synonymous_variant LOW 2337A>G Val779Val
M0184344 DBFIKJAC_00023 17214 3 Gut 0.50 protein_coding synonymous_variant LOW 1323G>A Arg441Arg
M0184345 DBFIKJAC_00023 17406 3 Gut 0.50 protein_coding synonymous_variant LOW 1131G>A Leu377Leu
M0184346 DBFIKJAC_00023 17613 3 Gut 0.50 protein_coding synonymous_variant LOW 924T>C Ile308Ile
M0184347 DBFIKJAC_00023 17724 3 Gut 0.50 protein_coding synonymous_variant LOW 813T>C Phe271Phe
M0184348 DBFIKJAC_00023 17805 3 Gut 0.50 protein_coding synonymous_variant LOW 732G>A Val244Val
M0184349 DBFIKJAC_00023 18015 3 Gut 0.50 protein_coding synonymous_variant LOW 522G>A Lys174Lys
M0184350 DBFIKJAC_00023 18168 3 Gut 0.50 protein_coding synonymous_variant LOW 369C>T Ser123Ser
M0184351 DBFIKJAC_00023 18234 3 Gut 0.50 protein_coding synonymous_variant LOW 303A>G Leu101Leu
M0184352 DBFIKJAC_00023 18438 3 Gut 0.50 protein_coding synonymous_variant LOW 99C>T Asp33Asp
M0184353 DBFIKJAC_00023 18470 3 Gut 0.50 protein_coding missense_variant MODERATE 67T>G Ser23Ala
M0184354 DBFIKJAC_00024 18853 3 Gut 0.50 protein_coding synonymous_variant LOW 96G>T Leu32Leu
M0184355 DBFIKJAC_00024 18922 3 Gut 0.50 protein_coding synonymous_variant LOW 27A>G Val9Val
M0184356 DBFIKJAC_00025 18977 3 Gut 0.50 protein_coding missense_variant MODERATE 295G>A Val99Ile
M0184357 DBFIKJAC_00025 19002 3 Gut 0.50 protein_coding synonymous_variant LOW 270A>G Glu90Glu
M0184358 DBFIKJAC_00025 19043 3 Gut 0.50 protein_coding missense_variant MODERATE 229A>G Ile77Val
M0184359 DBFIKJAC_00025 19200 3 Gut 0.50 protein_coding synonymous_variant LOW 72T>C Ser24Ser
M0184360 DBFIKJAC_00027 20539 3 Gut 0.50 protein_coding missense_variant MODERATE 1343A>G Asn448Ser
M0184361 DBFIKJAC_00027 20548 3 Gut 0.50 protein_coding missense_variant MODERATE 1334C>T Ser445Leu
M0184362 DBFIKJAC_00027 20550 3 Gut 0.50 protein_coding synonymous_variant LOW 1332G>A Val444Val
M0184363 DBFIKJAC_00027 20595 3 Gut 0.50 protein_coding synonymous_variant LOW 1287G>A Ala429Ala
M0184364 DBFIKJAC_00027 20627 3 Gut 0.50 protein_coding synonymous_variant LOW 1255T>C Leu419Leu
M0184365 DBFIKJAC_00027 20631 3 Gut 0.50 protein_coding synonymous_variant LOW 1251G>A Leu417Leu
M0184366 DBFIKJAC_00027 20637 3 Gut 0.50 protein_coding synonymous_variant LOW 1245A>G Arg415Arg
M0184367 DBFIKJAC_00027 20652 3 Gut 0.50 protein_coding synonymous_variant LOW 1230G>A Pro410Pro
M0184368 DBFIKJAC_00027 20667 3 Gut 0.50 protein_coding synonymous_variant LOW 1215G>A Ala405Ala
M0184369 DBFIKJAC_00027 20673 3 Gut 0.50 protein_coding synonymous_variant LOW 1209A>T Ser403Ser
M0184370 DBFIKJAC_00027 20694 3 Gut 0.50 protein_coding synonymous_variant LOW 1188A>C Ala396Ala
M0184371 DBFIKJAC_00027 20718 3 Gut 0.50 protein_coding synonymous_variant LOW 1164C>T Cys388Cys
M0184372 DBFIKJAC_00027 20730 3 Gut 0.50 protein_coding synonymous_variant LOW 1152T>C Pro384Pro
M0184373 DBFIKJAC_00027 20784 3 Gut 0.50 protein_coding synonymous_variant LOW 1098A>G Gly366Gly
M0184374 DBFIKJAC_00027 20817 3 Gut 0.50 protein_coding synonymous_variant LOW 1065G>A Leu355Leu
M0184375 DBFIKJAC_00027 20828 3 Gut 0.50 protein_coding synonymous_variant LOW 1054T>C Leu352Leu
M0184376 DBFIKJAC_00027 20874 3 Gut 0.50 protein_coding synonymous_variant LOW 1008G>A Thr336Thr
M0184377 DBFIKJAC_00027 20934 3 Gut 0.50 protein_coding synonymous_variant LOW 948T>C Cys316Cys
M0184378 DBFIKJAC_00027 20990 3 Gut 0.50 protein_coding missense_variant MODERATE 892A>C Lys298Gln
M0184379 DBFIKJAC_00027 21006 3 Gut 0.50 protein_coding synonymous_variant LOW 876A>G Arg292Arg
M0184380 DBFIKJAC_00027 21021 3 Gut 0.50 protein_coding synonymous_variant LOW 861A>G Lys287Lys
M0184381 DBFIKJAC_00027 21027 3 Gut 0.50 protein_coding synonymous_variant LOW 855A>G Leu285Leu
M0184382 DBFIKJAC_00027 21063 3 Gut 0.50 protein_coding synonymous_variant LOW 819T>G Thr273Thr
M0184383 DBFIKJAC_00027 21075 3 Gut 0.50 protein_coding synonymous_variant LOW 807C>T Gly269Gly
M0184384 DBFIKJAC_00027 21078 3 Gut 0.50 protein_coding synonymous_variant LOW 804C>T Tyr268Tyr
M0184385 DBFIKJAC_00027 21087 3 Gut 0.50 protein_coding synonymous_variant LOW 795T>C Tyr265Tyr
M0184386 DBFIKJAC_00027 21090 3 Gut 0.50 protein_coding synonymous_variant LOW 792C>T Asp264Asp
M0184387 DBFIKJAC_00027 21095 3 Gut 0.50 protein_coding synonymous_variant LOW 787C>T Leu263Leu
M0184388 DBFIKJAC_00027 21096 3 Gut 0.50 protein_coding synonymous_variant LOW 786T>C Gly262Gly
M0184389 DBFIKJAC_00027 21105 3 Gut 0.50 protein_coding synonymous_variant LOW 777T>C Val259Val
M0184390 DBFIKJAC_00027 21108 3 Gut 0.50 protein_coding synonymous_variant LOW 774C>T Gly258Gly
M0184391 DBFIKJAC_00027 21132 3 Gut 0.50 protein_coding synonymous_variant LOW 750T>G Val250Val
M0184392 DBFIKJAC_00027 21149 3 Gut 0.50 protein_coding missense_variant MODERATE 733A>C Ser245Arg
M0184393 DBFIKJAC_00027 21155 3 Gut 0.50 protein_coding synonymous_variant LOW 727C>T Leu243Leu
M0184394 DBFIKJAC_00027 21156 3 Gut 0.50 protein_coding synonymous_variant LOW 726G>A Gln242Gln
M0184395 DBFIKJAC_00027 21180 3 Gut 0.50 protein_coding synonymous_variant LOW 702G>A Val234Val
M0184396 DBFIKJAC_00027 21261 3 Gut 0.50 protein_coding synonymous_variant LOW 621T>G Gly207Gly
M0184397 DBFIKJAC_00027 21276 3 Gut 0.50 protein_coding synonymous_variant LOW 606C>T Cys202Cys
M0184398 DBFIKJAC_00027 21309 3 Gut 0.50 protein_coding missense_variant MODERATE 573A>T Glu191Asp
M0184399 DBFIKJAC_00027 21327 3 Gut 0.50 protein_coding synonymous_variant LOW 555G>A Pro185Pro
M0184400 DBFIKJAC_00027 21334 3 Gut 0.50 protein_coding missense_variant MODERATE 548A>G Lys183Arg
M0184401 DBFIKJAC_00027 21365 3 Gut 0.50 protein_coding missense_variant MODERATE 517A>G Ile173Val
M0184402 DBFIKJAC_00027 21368 3 Gut 0.50 protein_coding missense_variant MODERATE 514A>G Ile172Val
M0184403 DBFIKJAC_00027 21399 3 Gut 0.50 protein_coding synonymous_variant LOW 483T>C Ile161Ile
M0184404 DBFIKJAC_00027 21405 3 Gut 0.50 protein_coding synonymous_variant LOW 477T>C Cys159Cys
M0184405 DBFIKJAC_00027 21411 3 Gut 0.50 protein_coding synonymous_variant LOW 471G>A Leu157Leu
M0184406 DBFIKJAC_00027 21430 3 Gut 0.50 protein_coding missense_variant MODERATE 452T>A Val151Glu
M0184407 DBFIKJAC_00027 21457 3 Gut 0.50 protein_coding missense_variant MODERATE 425G>A Ser142Asn
M0184408 DBFIKJAC_00027 21468 3 Gut 0.50 protein_coding synonymous_variant LOW 414C>T Arg138Arg
M0184409 DBFIKJAC_00027 21483 3 Gut 0.50 protein_coding missense_variant MODERATE 399A>G Ile133Met
M0184410 DBFIKJAC_00027 21489 3 Gut 0.50 protein_coding synonymous_variant LOW 393C>T Gly131Gly
M0184411 DBFIKJAC_00027 21505 3 Gut 0.50 protein_coding missense_variant MODERATE 377T>C Val126Ala
M0184412 DBFIKJAC_00027 21543 3 Gut 0.50 protein_coding synonymous_variant LOW 339A>G Lys113Lys
M0184413 DBFIKJAC_00027 21564 3 Gut 0.50 protein_coding synonymous_variant LOW 318G>A Lys106Lys
M0184414 DBFIKJAC_00027 21567 3 Gut 0.50 protein_coding synonymous_variant LOW 315A>G Arg105Arg
M0184415 DBFIKJAC_00027 21568 3 Gut 0.50 protein_coding missense_variant MODERATE 314G>A Arg105Gln
M0184416 DBFIKJAC_00027 21574 3 Gut 0.50 protein_coding missense_variant MODERATE 308T>A Phe103Tyr
M0184417 DBFIKJAC_00027 21582 3 Gut 0.50 protein_coding synonymous_variant LOW 300G>A Gln100Gln
M0184418 DBFIKJAC_00027 21594 3 Gut 0.50 protein_coding synonymous_variant LOW 288T>C Ile96Ile
M0184419 DBFIKJAC_00027 21611 3 Gut 0.50 protein_coding synonymous_variant LOW 271T>C Leu91Leu
M0184420 DBFIKJAC_00027 21612 3 Gut 0.50 protein_coding synonymous_variant LOW 270T>C Ala90Ala
M0184421 DBFIKJAC_00027 21627 3 Gut 0.50 protein_coding synonymous_variant LOW 255G>A Pro85Pro
M0184422 DBFIKJAC_00027 21630 3 Gut 0.50 protein_coding synonymous_variant LOW 252A>T Ser84Ser
M0184423 DBFIKJAC_00027 21635 3 Gut 0.50 protein_coding synonymous_variant LOW 247C>T Leu83Leu
M0184424 DBFIKJAC_00027 21678 3 Gut 0.50 protein_coding missense_variant MODERATE 204G>T Glu68Asp
M0184425 DBFIKJAC_00027 21680 3 Gut 0.50 protein_coding missense_variant MODERATE 202G>A Glu68Lys
M0184426 DBFIKJAC_00027 21684 3 Gut 0.50 protein_coding synonymous_variant LOW 198T>C Val66Val
M0184427 DBFIKJAC_00027 21693 3 Gut 0.50 protein_coding synonymous_variant LOW 189T>C Val63Val
M0184428 DBFIKJAC_00027 21695 3 Gut 0.50 protein_coding missense_variant MODERATE 187G>A Val63Ile
M0184429 DBFIKJAC_00027 21701 3 Gut 0.50 protein_coding missense_variant MODERATE 181G>T Ala61Ser
M0184430 DBFIKJAC_00027 21705 3 Gut 0.50 protein_coding missense_variant MODERATE 177T>G His59Gln
M0184431 DBFIKJAC_00027 21709 3 Gut 0.50 protein_coding missense_variant MODERATE 173G>A Gly58Glu
M0184432 DBFIKJAC_00027 21715 3 Gut 0.50 protein_coding missense_variant MODERATE 167G>A Arg56Gln
M0184433 DBFIKJAC_00027 21717 3 Gut 0.50 protein_coding synonymous_variant LOW 165A>G Thr55Thr
M0184434 DBFIKJAC_00027 21718 3 Gut 0.50 protein_coding missense_variant MODERATE 164C>T Thr55Ile
M0184435 DBFIKJAC_00027 21732 3 Gut 0.50 protein_coding synonymous_variant LOW 150A>C Ala50Ala
M0184436 DBFIKJAC_00027 21798 3 Gut 0.50 protein_coding synonymous_variant LOW 84C>T Val28Val
M0184437 DBFIKJAC_00027 21801 3 Gut 0.50 protein_coding synonymous_variant LOW 81C>T Ser27Ser
M0184438 DBFIKJAC_00027 21807 3 Gut 0.50 protein_coding synonymous_variant LOW 75G>A Leu25Leu
M0184439 DBFIKJAC_00027 21824 3 Gut 0.50 protein_coding missense_variant MODERATE 58A>G Ile20Val
M0184440 DBFIKJAC_00027 21827 3 Gut 0.50 protein_coding missense_variant MODERATE 55G>A Val19Ile
M0184441 DBFIKJAC_00030 23132 3 Gut 0.50 protein_coding missense_variant MODERATE 321T>G His107Gln
M0184442 DBFIKJAC_00031 23460 3 Gut 0.50 protein_coding missense_variant MODERATE 11767G>A Asp3923Asn
M0184443 DBFIKJAC_00031 23633 3 Gut 0.50 protein_coding missense_variant MODERATE 11594C>A Thr3865Lys
M0184444 DBFIKJAC_00031 23708 3 Gut 0.50 protein_coding missense_variant MODERATE 11519T>C Leu3840Pro
M0184445 DBFIKJAC_00031 23894 3 Gut 0.50 protein_coding stop_gained HIGH 11333T>A Leu3778*
M0184446 DBFIKJAC_00031 23895 3 Gut 0.50 protein_coding missense_variant MODERATE 11332T>G Leu3778Val
M0184447 DBFIKJAC_00031 24099 3 Gut 0.50 protein_coding missense_variant MODERATE 11128G>A Ala3710Thr
M0184448 DBFIKJAC_00031 24133 3 Gut 0.50 protein_coding synonymous_variant LOW 11094T>C Thr3698Thr
M0184449 DBFIKJAC_00031 24217 3 Gut 0.50 protein_coding synonymous_variant LOW 11010A>G Glu3670Glu
M0184450 DBFIKJAC_00031 24323 3 Gut 0.50 protein_coding missense_variant MODERATE 10904A>G Glu3635Gly
M0184451 DBFIKJAC_00031 24324 3 Gut 0.50 protein_coding missense_variant MODERATE 10903G>A Glu3635Lys
M0184452 DBFIKJAC_00031 24383 3 Gut 0.50 protein_coding missense_variant MODERATE 10844G>T Cys3615Phe
M0184453 DBFIKJAC_00031 24397 3 Gut 0.50 protein_coding synonymous_variant LOW 10830T>C Ser3610Ser
M0184454 DBFIKJAC_00031 24493 3 Gut 0.50 protein_coding synonymous_variant LOW 10734C>A Ser3578Ser
M0184455 DBFIKJAC_00031 24498 3 Gut 0.50 protein_coding synonymous_variant LOW 10729T>C Leu3577Leu
M0184456 DBFIKJAC_00031 24587 3 Gut 0.50 protein_coding missense_variant MODERATE 10640T>C Val3547Ala
M0184457 DBFIKJAC_00031 24770 3 Gut 0.50 protein_coding missense_variant MODERATE 10457C>T Ala3486Val
M0184458 DBFIKJAC_00031 25154 3 Gut 0.50 protein_coding missense_variant MODERATE 10073C>T Ser3358Leu
M0184459 DBFIKJAC_00031 25734 3 Gut 0.50 protein_coding synonymous_variant LOW 9493T>C Leu3165Leu
M0184460 DBFIKJAC_00031 26125 3 Gut 0.50 protein_coding synonymous_variant LOW 9102T>C Ala3034Ala
M0184461 DBFIKJAC_00031 26143 3 Gut 0.50 protein_coding synonymous_variant LOW 9084T>C Thr3028Thr
M0184462 DBFIKJAC_00031 26554 3 Gut 0.50 protein_coding missense_variant MODERATE 8673C>G Ile2891Met
M0184463 DBFIKJAC_00031 26641 3 Gut 0.50 protein_coding missense_variant MODERATE 8586A>G Ile2862Met
M0184464 DBFIKJAC_00031 26693 3 Gut 0.50 protein_coding missense_variant MODERATE 8534C>A Pro2845Gln
M0184465 DBFIKJAC_00031 27100 3 Gut 0.50 protein_coding synonymous_variant LOW 8127T>C Ile2709Ile
M0184466 DBFIKJAC_00031 27140 3 Gut 0.50 protein_coding missense_variant MODERATE 8087A>G His2696Arg
M0184467 DBFIKJAC_00031 27149 3 Gut 0.50 protein_coding missense_variant MODERATE 8078C>A Ala2693Asp
M0184468 DBFIKJAC_00031 27181 3 Gut 0.50 protein_coding synonymous_variant LOW 8046G>A Glu2682Glu
M0184469 DBFIKJAC_00031 27202 3 Gut 0.50 protein_coding synonymous_variant LOW 8025T>C Thr2675Thr
M0184470 DBFIKJAC_00031 27214 3 Gut 0.50 protein_coding synonymous_variant LOW 8013A>G Gly2671Gly
M0184471 DBFIKJAC_00031 27232 3 Gut 0.50 protein_coding synonymous_variant LOW 7995T>C Asp2665Asp
M0184472 DBFIKJAC_00031 27261 3 Gut 0.50 protein_coding missense_variant MODERATE 7966A>G Ser2656Gly
M0184473 DBFIKJAC_00031 27274 3 Gut 0.50 protein_coding synonymous_variant LOW 7953T>C Cys2651Cys
M0184474 DBFIKJAC_00031 27317 3 Gut 0.50 protein_coding missense_variant MODERATE 7910A>G His2637Arg
M0184475 DBFIKJAC_00031 27337 3 Gut 0.50 protein_coding synonymous_variant LOW 7890A>G Ala2630Ala
M0184476 DBFIKJAC_00031 27340 3 Gut 0.50 protein_coding synonymous_variant LOW 7887G>T Thr2629Thr
M0184477 DBFIKJAC_00031 27415 3 Gut 0.50 protein_coding synonymous_variant LOW 7812A>C Ala2604Ala
M0184478 DBFIKJAC_00031 27472 3 Gut 0.50 protein_coding synonymous_variant LOW 7755T>C Phe2585Phe
M0184479 DBFIKJAC_00031 27478 3 Gut 0.50 protein_coding synonymous_variant LOW 7749T>G Leu2583Leu
M0184480 DBFIKJAC_00031 27490 3 Gut 0.50 protein_coding synonymous_variant LOW 7737C>T Thr2579Thr
M0184481 DBFIKJAC_00031 27496 3 Gut 0.50 protein_coding synonymous_variant LOW 7731A>T Val2577Val
M0184482 DBFIKJAC_00031 27505 3 Gut 0.50 protein_coding synonymous_variant LOW 7722A>C Thr2574Thr






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term