Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C911
  Reference Plasmid   NZ_CP076559.1
  Reference Plasmid Size   162057
  Reference Plasmid GC Content   0.62
  Reference Plasmid Mobility Type   conjugative





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0104540 IENBMKDG_00031 30659 8 Skin 0.33 protein_coding missense_variant MODERATE 2858G>A Arg953Gln
M0104541 IENBMKDG_00029 30691 8 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -3625A>C None
M0104542 IENBMKDG_00029 30711 8 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -3645G>A None
M0104543 IENBMKDG_00029 30775 9 Skin 0.38 protein_coding upstream_gene_variant MODIFIER -3709T>A None
M0104544 IENBMKDG_00032 30940 9 Skin 0.38 protein_coding synonymous_variant LOW 102A>G Glu34Glu
M0104545 IENBMKDG_00032 31045 9 Skin 0.38 protein_coding synonymous_variant LOW 207T>C Arg69Arg
M0104546 IENBMKDG_00032 31046 9 Skin 0.38 protein_coding missense_variant MODERATE 208A>G Ile70Val
M0104547 IENBMKDG_00032 31048 9 Skin 0.38 protein_coding synonymous_variant LOW 210A>C Ile70Ile
M0104548 IENBMKDG_00032 31102 9 Skin 0.38 protein_coding synonymous_variant LOW 264T>C Leu88Leu
M0104549 IENBMKDG_00032 31153 9 Skin 0.38 protein_coding synonymous_variant LOW 315G>T Leu105Leu
M0104550 IENBMKDG_00032 31309 9 Skin 0.38 protein_coding synonymous_variant LOW 471C>T Leu157Leu
M0104551 IENBMKDG_00032 31405 9 Skin 0.38 protein_coding synonymous_variant LOW 567G>C Ala189Ala
M0104552 IENBMKDG_00032 31423 9 Skin 0.38 protein_coding synonymous_variant LOW 585T>C Gly195Gly
M0104553 IENBMKDG_00032 31498 9 Skin 0.38 protein_coding synonymous_variant LOW 660C>T Phe220Phe
M0104554 IENBMKDG_00032 31522 9 Skin 0.38 protein_coding synonymous_variant LOW 684T>C Cys228Cys
M0104555 IENBMKDG_00032 31540 9 Skin 0.38 protein_coding synonymous_variant LOW 702T>C Leu234Leu
M0104556 IENBMKDG_00032 31642 9 Skin 0.38 protein_coding synonymous_variant LOW 804C>A Gly268Gly
M0104557 IENBMKDG_00032 31714 9 Skin 0.38 protein_coding synonymous_variant LOW 876A>G Arg292Arg
M0104558 IENBMKDG_00032 31725 9 Skin 0.38 protein_coding missense_variant MODERATE 887G>A Arg296His
M0104559 IENBMKDG_00032 31903 9 Skin 0.38 protein_coding synonymous_variant LOW 1065C>T Ile355Ile
M0104560 IENBMKDG_00032 31957 9 Skin 0.38 protein_coding synonymous_variant LOW 1119T>C Ser373Ser
M0104561 IENBMKDG_00032 31975 9 Skin 0.38 protein_coding synonymous_variant LOW 1137T>C His379His
M0104562 IENBMKDG_00032 32020 9 Skin 0.38 protein_coding synonymous_variant LOW 1182C>T Pro394Pro
M0104563 IENBMKDG_00032 32026 9 Skin 0.38 protein_coding synonymous_variant LOW 1188A>G Ala396Ala
M0104564 IENBMKDG_00032 32056 9 Skin 0.38 protein_coding synonymous_variant LOW 1218C>G Leu406Leu
M0104565 IENBMKDG_00032 32203 9 Skin 0.38 protein_coding synonymous_variant LOW 1365T>A Ala455Ala
M0104566 IENBMKDG_00032 32212 9 Skin 0.38 protein_coding missense_variant MODERATE 1374C>A Ser458Arg
M0104567 IENBMKDG_00032 32282 9 Skin 0.38 protein_coding missense_variant MODERATE 1444G>A Ala482Thr
M0104568 IENBMKDG_00032 32293 9 Skin 0.38 protein_coding synonymous_variant LOW 1455A>T Pro485Pro
M0104569 IENBMKDG_00032 32318 9 Skin 0.38 protein_coding synonymous_variant LOW 1480C>T Leu494Leu
M0104570 IENBMKDG_00032 32339 9 Skin 0.38 protein_coding missense_variant MODERATE 1501C>T His501Tyr
M0104571 IENBMKDG_00033 32349 9 Skin 0.38 protein_coding synonymous_variant LOW 6G>C Thr2Thr
M0104572 IENBMKDG_00033 32361 9 Skin 0.38 protein_coding synonymous_variant LOW 18T>C Asp6Asp
M0104573 IENBMKDG_00033 32368 9 Skin 0.38 protein_coding missense_variant MODERATE 25A>G Thr9Ala
M0104574 IENBMKDG_00033 32376 9 Skin 0.38 protein_coding synonymous_variant LOW 33A>G Val11Val
M0104575 IENBMKDG_00033 32391 9 Skin 0.38 protein_coding synonymous_variant LOW 48G>C Leu16Leu
M0104576 IENBMKDG_00033 32412 9 Skin 0.38 protein_coding synonymous_variant LOW 69C>T Ser23Ser
M0104577 IENBMKDG_00033 32508 9 Skin 0.38 protein_coding synonymous_variant LOW 165T>C Ala55Ala
M0104578 IENBMKDG_00033 32595 9 Skin 0.38 protein_coding synonymous_variant LOW 252C>A Ala84Ala
M0104579 IENBMKDG_00033 32657 9 Skin 0.38 protein_coding missense_variant MODERATE 314A>G Asn105Ser
M0104580 IENBMKDG_00033 32715 9 Skin 0.38 protein_coding synonymous_variant LOW 372C>T Ala124Ala
M0104581 IENBMKDG_00033 32724 9 Skin 0.38 protein_coding synonymous_variant LOW 381C>T Gly127Gly
M0104582 IENBMKDG_00033 32817 9 Skin 0.38 protein_coding synonymous_variant LOW 474G>A Leu158Leu
M0104583 IENBMKDG_00033 32898 9 Skin 0.38 protein_coding synonymous_variant LOW 555A>G Glu185Glu
M0104584 IENBMKDG_00033 33006 8 Skin 0.33 protein_coding synonymous_variant LOW 663C>T Ala221Ala
M0104585 IENBMKDG_00033 33047 8 Skin 0.33 protein_coding missense_variant MODERATE 704C>T Thr235Ile
M0104586 IENBMKDG_00033 33081 8 Skin 0.33 protein_coding synonymous_variant LOW 738G>A Lys246Lys
M0104587 IENBMKDG_00033 33099 8 Skin 0.33 protein_coding synonymous_variant LOW 756C>T Arg252Arg
M0104588 IENBMKDG_00033 33121 8 Skin 0.33 protein_coding missense_variant MODERATE 778A>C Thr260Pro
M0104589 IENBMKDG_00033 33126 8 Skin 0.33 protein_coding synonymous_variant LOW 783T>G Pro261Pro
M0104590 IENBMKDG_00034 33247 8 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -402A>G None
M0104591 IENBMKDG_00034 33268 8 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -381C>T None
M0104592 IENBMKDG_00034 33315 8 Skin 0.33 protein_coding upstream_gene_variant MODIFIER -334T>C None
M0104593 IENBMKDG_00075 77237 4 Skin 0.17 protein_coding missense_variant MODERATE 377T>C Val126Ala
M0104594 IENBMKDG_00075 77239 4 Skin 0.17 protein_coding synonymous_variant LOW 375C>A Val125Val
M0104595 IENBMKDG_00075 77251 4 Skin 0.17 protein_coding synonymous_variant LOW 363C>T Ala121Ala
M0104596 IENBMKDG_00075 77311 4 Skin 0.17 protein_coding synonymous_variant LOW 303C>T Ile101Ile
M0104597 IENBMKDG_00075 77368 4 Skin 0.17 protein_coding synonymous_variant LOW 246A>G Ala82Ala
M0104598 IENBMKDG_00075 77407 4 Skin 0.17 protein_coding synonymous_variant LOW 207C>T Ile69Ile
M0104599 IENBMKDG_00075 77416 4 Skin 0.17 protein_coding synonymous_variant LOW 198C>T Gly66Gly
M0104600 IENBMKDG_00075 77430 4 Skin 0.17 protein_coding synonymous_variant LOW 184T>C Leu62Leu
M0104601 IENBMKDG_00075 77485 4 Skin 0.17 protein_coding synonymous_variant LOW 129T>C Asp43Asp
M0104602 IENBMKDG_00075 77513 4 Skin 0.17 protein_coding missense_variant MODERATE 101C>T Thr34Met
M0104603 IENBMKDG_00075 77514 4 Skin 0.17 protein_coding missense_variant MODERATE 100A>G Thr34Ala
M0104604 IENBMKDG_00075 77524 4 Skin 0.17 protein_coding synonymous_variant LOW 90A>G Val30Val
M0104605 IENBMKDG_00075 77531 4 Skin 0.17 protein_coding missense_variant MODERATE 83C>T Ala28Val
M0104606 IENBMKDG_00075 77533 4 Skin 0.17 protein_coding synonymous_variant LOW 81C>T Arg27Arg
M0104607 IENBMKDG_00075 77539 4 Skin 0.17 protein_coding synonymous_variant LOW 75A>G Glu25Glu
M0104608 IENBMKDG_00075 77542 4 Skin 0.17 protein_coding synonymous_variant LOW 72T>C Asp24Asp
M0104609 IENBMKDG_00076 77618 4 Skin 0.17 protein_coding missense_variant MODERATE 1645G>T Val549Leu
M0104610 IENBMKDG_00076 77730 4 Skin 0.17 protein_coding missense_variant MODERATE 1533A>C Gln511His
M0104611 IENBMKDG_00076 77810 4 Skin 0.17 protein_coding missense_variant MODERATE 1453G>A Gly485Ser
M0104612 IENBMKDG_00076 77811 4 Skin 0.17 protein_coding synonymous_variant LOW 1452T>C Gly484Gly
M0104613 IENBMKDG_00076 77816 4 Skin 0.17 protein_coding missense_variant MODERATE 1447A>C Lys483Gln
M0104614 IENBMKDG_00076 77823 4 Skin 0.17 protein_coding synonymous_variant LOW 1440T>C Ala480Ala
M0104615 IENBMKDG_00076 77838 4 Skin 0.17 protein_coding synonymous_variant LOW 1425G>C Arg475Arg
M0104616 IENBMKDG_00076 77842 4 Skin 0.17 protein_coding missense_variant MODERATE 1421G>A Arg474His
M0104617 IENBMKDG_00076 77849 4 Skin 0.17 protein_coding missense_variant MODERATE 1414A>G Thr472Ala
M0104618 IENBMKDG_00076 77850 4 Skin 0.17 protein_coding synonymous_variant LOW 1413T>C Ala471Ala
M0104619 IENBMKDG_00076 77889 4 Skin 0.17 protein_coding synonymous_variant LOW 1374A>G Ser458Ser
M0104620 IENBMKDG_00076 77901 4 Skin 0.17 protein_coding synonymous_variant LOW 1362C>T Pro454Pro
M0104621 IENBMKDG_00076 77902 4 Skin 0.17 protein_coding missense_variant MODERATE 1361C>G Pro454Arg
M0104622 IENBMKDG_00076 77903 4 Skin 0.17 protein_coding missense_variant MODERATE 1360C>T Pro454Ser
M0104623 IENBMKDG_00076 77904 4 Skin 0.17 protein_coding synonymous_variant LOW 1359A>G Ala453Ala
M0104624 IENBMKDG_00076 78027 4 Skin 0.17 protein_coding synonymous_variant LOW 1236C>T Ile412Ile
M0104625 IENBMKDG_00076 78033 4 Skin 0.17 protein_coding synonymous_variant LOW 1230G>C Val410Val
M0104626 IENBMKDG_00076 78042 4 Skin 0.17 protein_coding synonymous_variant LOW 1221C>T Ala407Ala
M0104627 IENBMKDG_00076 78045 4 Skin 0.17 protein_coding synonymous_variant LOW 1218A>C Thr406Thr
M0104628 IENBMKDG_00076 78048 4 Skin 0.17 protein_coding synonymous_variant LOW 1215T>A Ile405Ile
M0104629 IENBMKDG_00076 78051 4 Skin 0.17 protein_coding synonymous_variant LOW 1212A>C Thr404Thr
M0104630 IENBMKDG_00076 78096 4 Skin 0.17 protein_coding synonymous_variant LOW 1167T>C Asp389Asp
M0104631 IENBMKDG_00076 78228 4 Skin 0.17 protein_coding synonymous_variant LOW 1035C>T Phe345Phe
M0104632 IENBMKDG_00076 78285 4 Skin 0.17 protein_coding synonymous_variant LOW 978G>C Val326Val
M0104633 IENBMKDG_00076 78294 4 Skin 0.17 protein_coding synonymous_variant LOW 969C>G Gly323Gly
M0104634 IENBMKDG_00076 78300 4 Skin 0.17 protein_coding synonymous_variant LOW 963C>A Ala321Ala
M0104635 IENBMKDG_00076 78303 4 Skin 0.17 protein_coding synonymous_variant LOW 960T>C Gly320Gly
M0104636 IENBMKDG_00076 78309 4 Skin 0.17 protein_coding synonymous_variant LOW 954T>A Leu318Leu
M0104637 IENBMKDG_00076 78311 4 Skin 0.17 protein_coding missense_variant MODERATE 952C>T Leu318Phe
M0104638 IENBMKDG_00076 78330 4 Skin 0.17 protein_coding missense_variant MODERATE 933A>G Ile311Met
M0104639 IENBMKDG_00076 78345 4 Skin 0.17 protein_coding synonymous_variant LOW 918T>A Arg306Arg
M0104640 IENBMKDG_00076 78375 4 Skin 0.17 protein_coding synonymous_variant LOW 888G>C Gly296Gly
M0104641 IENBMKDG_00076 78384 4 Skin 0.17 protein_coding synonymous_variant LOW 879G>A Arg293Arg
M0104642 IENBMKDG_00076 78386 4 Skin 0.17 protein_coding synonymous_variant LOW 877A>C Arg293Arg
M0104643 IENBMKDG_00076 78420 4 Skin 0.17 protein_coding synonymous_variant LOW 843T>C Ser281Ser
M0104644 IENBMKDG_00076 78503 3 Skin 0.13 protein_coding missense_variant MODERATE 760G>A Asp254Asn
M0104645 IENBMKDG_00076 78524 3 Skin 0.13 protein_coding synonymous_variant LOW 739C>T Leu247Leu
M0104646 IENBMKDG_00076 78546 3 Skin 0.13 protein_coding synonymous_variant LOW 717T>C Asn239Asn
M0104647 IENBMKDG_00076 78552 3 Skin 0.13 protein_coding missense_variant MODERATE 711G>A Met237Ile
M0104648 IENBMKDG_00076 78554 3 Skin 0.13 protein_coding missense_variant MODERATE 709A>G Met237Val
M0104649 IENBMKDG_00076 78576 3 Skin 0.13 protein_coding synonymous_variant LOW 687T>G Ser229Ser
M0104650 IENBMKDG_00076 78579 3 Skin 0.13 protein_coding synonymous_variant LOW 684A>C Pro228Pro
M0104651 IENBMKDG_00076 78600 3 Skin 0.13 protein_coding synonymous_variant LOW 663T>C Phe221Phe
M0104652 IENBMKDG_00076 78639 3 Skin 0.13 protein_coding synonymous_variant LOW 624C>A Thr208Thr
M0104653 IENBMKDG_00076 78642 3 Skin 0.13 protein_coding synonymous_variant LOW 621C>T Val207Val
M0104654 IENBMKDG_00076 78651 3 Skin 0.13 protein_coding synonymous_variant LOW 612G>A Arg204Arg
M0104655 IENBMKDG_00076 78666 3 Skin 0.13 protein_coding synonymous_variant LOW 597C>A Arg199Arg
M0104656 IENBMKDG_00076 78674 3 Skin 0.13 protein_coding missense_variant MODERATE 589A>G Met197Val
M0104657 IENBMKDG_00076 78675 3 Skin 0.13 protein_coding synonymous_variant LOW 588T>C Ser196Ser
M0104658 IENBMKDG_00076 78678 3 Skin 0.13 protein_coding synonymous_variant LOW 585C>T Asp195Asp
M0104659 IENBMKDG_00076 78696 3 Skin 0.13 protein_coding synonymous_variant LOW 567A>C Ala189Ala
M0104660 IENBMKDG_00076 78726 3 Skin 0.13 protein_coding synonymous_variant LOW 537G>A Leu179Leu
M0104661 IENBMKDG_00076 78759 3 Skin 0.13 protein_coding synonymous_variant LOW 504A>G Pro168Pro
M0104662 IENBMKDG_00076 78762 3 Skin 0.13 protein_coding synonymous_variant LOW 501G>A Glu167Glu
M0104663 IENBMKDG_00076 78766 3 Skin 0.13 protein_coding missense_variant MODERATE 497T>A Phe166Tyr
M0104664 IENBMKDG_00074 76534 3 Skin 0.13 protein_coding missense_variant MODERATE 229C>A Leu77Ile
M0104665 IENBMKDG_00074 76546 3 Skin 0.13 protein_coding missense_variant MODERATE 217A>G Thr73Ala
M0104666 IENBMKDG_00074 76556 3 Skin 0.13 protein_coding synonymous_variant LOW 207T>C Asp69Asp
M0104667 IENBMKDG_00074 76570 3 Skin 0.13 protein_coding missense_variant MODERATE 193A>C Ser65Arg
M0104668 IENBMKDG_00074 76575 3 Skin 0.13 protein_coding missense_variant MODERATE 188A>T Glu63Val
M0104669 IENBMKDG_00074 76601 3 Skin 0.13 protein_coding synonymous_variant LOW 162T>C Ala54Ala
M0104670 IENBMKDG_00074 76604 3 Skin 0.13 protein_coding synonymous_variant LOW 159A>T Leu53Leu
M0104671 IENBMKDG_00074 76618 3 Skin 0.13 protein_coding synonymous_variant LOW 145C>T Leu49Leu
M0104672 IENBMKDG_00074 76619 3 Skin 0.13 protein_coding synonymous_variant LOW 144T>C Gly48Gly
M0104673 IENBMKDG_00074 76636 3 Skin 0.13 protein_coding synonymous_variant LOW 127C>T Leu43Leu
M0104674 IENBMKDG_00074 76641 3 Skin 0.13 protein_coding missense_variant MODERATE 122G>T Gly41Val
M0104675 IENBMKDG_00074 76642 3 Skin 0.13 protein_coding missense_variant MODERATE 121G>A Gly41Ser
M0104676 IENBMKDG_00074 76653 3 Skin 0.13 protein_coding missense_variant MODERATE 110G>A Gly37Asp
M0104677 IENBMKDG_00074 76673 3 Skin 0.13 protein_coding synonymous_variant LOW 90T>C Asp30Asp
M0104678 IENBMKDG_00074 76700 3 Skin 0.13 protein_coding synonymous_variant LOW 63A>C Pro21Pro
M0104679 IENBMKDG_00074 76724 3 Skin 0.13 protein_coding synonymous_variant LOW 39C>G Leu13Leu
M0104680 IENBMKDG_00074 76730 3 Skin 0.13 protein_coding synonymous_variant LOW 33A>T Ala11Ala
M0104681 IENBMKDG_00074 76748 3 Skin 0.13 protein_coding synonymous_variant LOW 15G>A Glu5Glu
M0104682 IENBMKDG_00075 76786 3 Skin 0.13 protein_coding synonymous_variant LOW 828G>A Arg276Arg
M0104683 IENBMKDG_00075 76789 3 Skin 0.13 protein_coding synonymous_variant LOW 825G>C Ala275Ala
M0104684 IENBMKDG_00075 76819 3 Skin 0.13 protein_coding synonymous_variant LOW 795T>C His265His
M0104685 IENBMKDG_00075 76821 3 Skin 0.13 protein_coding missense_variant MODERATE 793C>T His265Tyr
M0104686 IENBMKDG_00075 76825 3 Skin 0.13 protein_coding synonymous_variant LOW 789C>G Arg263Arg
M0104687 IENBMKDG_00075 76834 3 Skin 0.13 protein_coding synonymous_variant LOW 780C>G Thr260Thr
M0104688 IENBMKDG_00075 76835 3 Skin 0.13 protein_coding missense_variant MODERATE 779C>T Thr260Ile
M0104689 IENBMKDG_00075 76842 3 Skin 0.13 protein_coding synonymous_variant LOW 772C>A Arg258Arg
M0104690 IENBMKDG_00075 76846 3 Skin 0.13 protein_coding synonymous_variant LOW 768C>T Val256Val
M0104691 IENBMKDG_00075 76873 3 Skin 0.13 protein_coding synonymous_variant LOW 741A>G Lys247Lys
M0104692 IENBMKDG_00075 76885 3 Skin 0.13 protein_coding synonymous_variant LOW 729G>A Thr243Thr
M0104693 IENBMKDG_00075 76891 3 Skin 0.13 protein_coding synonymous_variant LOW 723C>T Gly241Gly
M0104694 IENBMKDG_00075 76903 3 Skin 0.13 protein_coding synonymous_variant LOW 711T>C Arg237Arg
M0104695 IENBMKDG_00075 76974 3 Skin 0.13 protein_coding synonymous_variant LOW 640T>C Leu214Leu
M0104696 IENBMKDG_00075 77014 3 Skin 0.13 protein_coding synonymous_variant LOW 600A>C Pro200Pro
M0104697 IENBMKDG_00075 77017 3 Skin 0.13 protein_coding synonymous_variant LOW 597A>G Thr199Thr
M0104698 IENBMKDG_00075 77044 3 Skin 0.13 protein_coding synonymous_variant LOW 570C>G Ala190Ala
M0104699 IENBMKDG_00075 77049 3 Skin 0.13 protein_coding synonymous_variant LOW 565T>C Leu189Leu
M0104700 IENBMKDG_00075 77092 3 Skin 0.13 protein_coding synonymous_variant LOW 522T>C Ala174Ala
M0104701 IENBMKDG_00075 77095 3 Skin 0.13 protein_coding synonymous_variant LOW 519G>T Val173Val
M0104702 IENBMKDG_00075 77098 3 Skin 0.13 protein_coding synonymous_variant LOW 516G>A Val172Val
M0104703 IENBMKDG_00075 77104 3 Skin 0.13 protein_coding synonymous_variant LOW 510T>C His170His
M0104704 IENBMKDG_00075 77107 3 Skin 0.13 protein_coding synonymous_variant LOW 507G>C Val169Val
M0104705 IENBMKDG_00075 77133 3 Skin 0.13 protein_coding synonymous_variant LOW 481C>A Arg161Arg
M0104706 IENBMKDG_00075 77197 3 Skin 0.13 protein_coding synonymous_variant LOW 417C>A Val139Val
M0104707 IENBMKDG_00075 77199 3 Skin 0.13 protein_coding missense_variant MODERATE 415G>A Val139Ile
M0104708 IENBMKDG_00075 77200 3 Skin 0.13 protein_coding synonymous_variant LOW 414A>C Ala138Ala
M0104709 IENBMKDG_00075 77218 3 Skin 0.13 protein_coding synonymous_variant LOW 396A>G Gln132Gln






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
IENBMKDG_00012 QGP81680.1|GH23 100 2.61e-231 1 321 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term