Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1031
  Reference Plasmid   NZ_CP098181.1
  Reference Plasmid Size   60138
  Reference Plasmid GC Content   0.42
  Reference Plasmid Mobility Type   conjugative





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0192839 FDAKEDKI_00001 87 4 Gut 0.57 protein_coding missense_variant MODERATE 55G>A Val19Ile
M0192840 FDAKEDKI_00001 716 4 Gut 0.57 protein_coding synonymous_variant LOW 684A>G Val228Val
M0192841 FDAKEDKI_00001 776 4 Gut 0.57 protein_coding missense_variant MODERATE 744T>G Asp248Glu
M0192842 FDAKEDKI_00001 1166 4 Gut 0.57 protein_coding synonymous_variant LOW 1134C>T Asp378Asp
M0192843 FDAKEDKI_00001 1329 4 Gut 0.57 protein_coding missense_variant MODERATE 1297A>G Ile433Val
M0192844 FDAKEDKI_00001 1413 4 Gut 0.57 protein_coding missense_variant MODERATE 1381A>G Thr461Ala
M0192845 FDAKEDKI_00001 1415 4 Gut 0.57 protein_coding synonymous_variant LOW 1383C>T Thr461Thr
M0192846 FDAKEDKI_00001 1444 4 Gut 0.57 protein_coding missense_variant MODERATE 1412T>C Val471Ala
M0192847 FDAKEDKI_00001 1619 4 Gut 0.57 protein_coding synonymous_variant LOW 1587G>A Gly529Gly
M0192848 FDAKEDKI_00001 1646 4 Gut 0.57 protein_coding synonymous_variant LOW 1614C>T Ile538Ile
M0192849 FDAKEDKI_00001 1650 4 Gut 0.57 protein_coding missense_variant MODERATE 1618A>G Ser540Gly
M0192850 FDAKEDKI_00001 1651 4 Gut 0.57 protein_coding missense_variant MODERATE 1619G>A Ser540Asn
M0192851 FDAKEDKI_00001 1652 4 Gut 0.57 protein_coding synonymous_variant LOW 1620T>C Ser540Ser
M0192852 FDAKEDKI_00001 1814 4 Gut 0.57 protein_coding synonymous_variant LOW 1782C>T Asn594Asn
M0192853 FDAKEDKI_00001 2255 4 Gut 0.57 protein_coding synonymous_variant LOW 2223T>A Ala741Ala
M0192854 FDAKEDKI_00001 2464 4 Gut 0.57 protein_coding missense_variant MODERATE 2432G>A Arg811His
M0192855 FDAKEDKI_00001 2586 4 Gut 0.57 protein_coding missense_variant MODERATE 2554A>C Lys852Gln
M0192856 FDAKEDKI_00002 3276 4 Gut 0.57 protein_coding synonymous_variant LOW 339A>G Thr113Thr
M0192857 FDAKEDKI_00002 3336 4 Gut 0.57 protein_coding missense_variant MODERATE 279C>A Asn93Lys
M0192858 FDAKEDKI_00002 3350 4 Gut 0.57 protein_coding missense_variant MODERATE 265A>G Ser89Gly
M0192859 FDAKEDKI_00002 3596 4 Gut 0.57 protein_coding missense_variant MODERATE 19A>G Thr7Ala
M0192860 FDAKEDKI_00002 3625 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -11C>T None
M0192861 FDAKEDKI_00002 3701 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -87G>A None
M0192862 FDAKEDKI_00002 3784 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -170C>T None
M0192863 FDAKEDKI_00002 3839 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -225A>G None
M0192864 FDAKEDKI_00002 3857 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -243G>A None
M0192865 FDAKEDKI_00003 3894 4 Gut 0.57 protein_coding missense_variant MODERATE 358A>T Arg120Trp
M0192866 FDAKEDKI_00003 3944 4 Gut 0.57 protein_coding missense_variant MODERATE 308T>G Phe103Cys
M0192867 FDAKEDKI_00003 4071 4 Gut 0.57 protein_coding missense_variant MODERATE 181A>C Lys61Gln
M0192868 FDAKEDKI_00003 4098 4 Gut 0.57 protein_coding missense_variant MODERATE 154G>A Val52Ile
M0192869 FDAKEDKI_00003 4102 4 Gut 0.57 protein_coding synonymous_variant LOW 150C>G Pro50Pro
M0192870 FDAKEDKI_00002 4310 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -696C>T None
M0192871 FDAKEDKI_00002 4349 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -735C>T None
M0192872 FDAKEDKI_00004 4379 4 Gut 0.57 protein_coding synonymous_variant LOW 180C>T Pro60Pro
M0192873 FDAKEDKI_00004 4384 4 Gut 0.57 protein_coding missense_variant MODERATE 175A>G Ile59Val
M0192874 FDAKEDKI_00004 4415 4 Gut 0.57 protein_coding synonymous_variant LOW 144A>G Ala48Ala
M0192875 FDAKEDKI_00004 4471 4 Gut 0.57 protein_coding missense_variant MODERATE 88A>T Ser30Cys
M0192876 FDAKEDKI_00004 4493 4 Gut 0.57 protein_coding synonymous_variant LOW 66G>A Lys22Lys
M0192877 FDAKEDKI_00002 4623 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -1009C>T None
M0192878 FDAKEDKI_00002 4641 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -1027C>T None
M0192879 FDAKEDKI_00002 4656 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -1042C>T None
M0192880 FDAKEDKI_00005 4719 4 Gut 0.57 protein_coding missense_variant MODERATE 279G>C Leu93Phe
M0192881 FDAKEDKI_00005 4722 4 Gut 0.57 protein_coding synonymous_variant LOW 276G>A Leu92Leu
M0192882 FDAKEDKI_00002 5405 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -1791C>T None
M0192883 FDAKEDKI_00007 5677 4 Gut 0.57 protein_coding missense_variant MODERATE 1952C>T Ser651Phe
M0192884 FDAKEDKI_00007 5682 4 Gut 0.57 protein_coding synonymous_variant LOW 1947C>T Ser649Ser
M0192885 FDAKEDKI_00007 5684 4 Gut 0.57 protein_coding missense_variant MODERATE 1945A>G Ser649Gly
M0192886 FDAKEDKI_00007 5691 4 Gut 0.57 protein_coding synonymous_variant LOW 1938G>A Arg646Arg
M0192887 FDAKEDKI_00007 5697 4 Gut 0.57 protein_coding synonymous_variant LOW 1932T>A Val644Val
M0192888 FDAKEDKI_00007 5721 4 Gut 0.57 protein_coding synonymous_variant LOW 1908C>T Cys636Cys
M0192889 FDAKEDKI_00007 5735 4 Gut 0.57 protein_coding synonymous_variant LOW 1894T>C Leu632Leu
M0192890 FDAKEDKI_00007 6624 4 Gut 0.57 protein_coding synonymous_variant LOW 1005C>T Ser335Ser
M0192891 FDAKEDKI_00007 6705 4 Gut 0.57 protein_coding synonymous_variant LOW 924C>T Ile308Ile
M0192892 FDAKEDKI_00007 7093 4 Gut 0.57 protein_coding missense_variant MODERATE 536C>T Thr179Ile
M0192893 FDAKEDKI_00007 7593 4 Gut 0.57 protein_coding synonymous_variant LOW 36A>G Ala12Ala
M0192894 FDAKEDKI_00011 9071 4 Gut 0.57 protein_coding synonymous_variant LOW 459C>T Arg153Arg
M0192895 FDAKEDKI_00011 9421 4 Gut 0.57 protein_coding missense_variant MODERATE 109A>T Ile37Phe
M0192896 FDAKEDKI_00011 9513 4 Gut 0.57 protein_coding missense_variant MODERATE 17C>T Thr6Ile
M0192897 FDAKEDKI_00004 9540 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4982A>G None
M0192898 FDAKEDKI_00012 9597 4 Gut 0.57 protein_coding synonymous_variant LOW 633C>T Asp211Asp
M0192899 FDAKEDKI_00012 9837 4 Gut 0.57 protein_coding missense_variant MODERATE 393A>T Lys131Asn
M0192900 FDAKEDKI_00012 9871 4 Gut 0.57 protein_coding missense_variant MODERATE 359A>C Asn120Thr
M0192901 FDAKEDKI_00012 9876 4 Gut 0.57 protein_coding synonymous_variant LOW 354C>T Asp118Asp
M0192902 FDAKEDKI_00012 9891 4 Gut 0.57 protein_coding missense_variant MODERATE 339T>G Ile113Met
M0192903 FDAKEDKI_00012 9893 4 Gut 0.57 protein_coding missense_variant MODERATE 337A>G Ile113Val
M0192904 FDAKEDKI_00012 9909 4 Gut 0.57 protein_coding synonymous_variant LOW 321C>T Ile107Ile
M0192905 FDAKEDKI_00012 9914 4 Gut 0.57 protein_coding missense_variant MODERATE 316A>G Asn106Asp
M0192906 FDAKEDKI_00012 10008 4 Gut 0.57 protein_coding synonymous_variant LOW 222T>C Gly74Gly
M0192907 FDAKEDKI_00012 10152 4 Gut 0.57 protein_coding synonymous_variant LOW 78C>T Asn26Asn
M0192908 FDAKEDKI_00013 10779 4 Gut 0.57 protein_coding missense_variant MODERATE 587A>G Asn196Ser
M0192909 FDAKEDKI_00013 10847 4 Gut 0.57 protein_coding synonymous_variant LOW 519G>A Gly173Gly
M0192910 FDAKEDKI_00013 10916 4 Gut 0.57 protein_coding synonymous_variant LOW 450G>A Ala150Ala
M0192911 FDAKEDKI_00013 10946 4 Gut 0.57 protein_coding synonymous_variant LOW 420T>C Asn140Asn
M0192912 FDAKEDKI_00013 11153 4 Gut 0.57 protein_coding synonymous_variant LOW 213A>C Pro71Pro
M0192913 FDAKEDKI_00013 11279 4 Gut 0.57 protein_coding synonymous_variant LOW 87C>T Gly29Gly
M0192914 FDAKEDKI_00015 12727 7 Gut 1.00 protein_coding synonymous_variant LOW 873C>T Tyr291Tyr
M0192915 FDAKEDKI_00015 12796 7 Gut 1.00 protein_coding synonymous_variant LOW 804C>T Ser268Ser
M0192916 FDAKEDKI_00015 12856 7 Gut 1.00 protein_coding synonymous_variant LOW 744T>C Gly248Gly
M0192917 FDAKEDKI_00015 12865 7 Gut 1.00 protein_coding synonymous_variant LOW 735T>A Thr245Thr
M0192918 FDAKEDKI_00015 12895 7 Gut 1.00 protein_coding synonymous_variant LOW 705T>C Phe235Phe
M0192919 FDAKEDKI_00015 12980 7 Gut 1.00 protein_coding missense_variant MODERATE 620A>G Asn207Ser
M0192920 FDAKEDKI_00015 13042 7 Gut 1.00 protein_coding synonymous_variant LOW 558G>A Leu186Leu
M0192921 FDAKEDKI_00015 13270 7 Gut 1.00 protein_coding synonymous_variant LOW 330C>T Arg110Arg
M0192922 FDAKEDKI_00015 13414 7 Gut 1.00 protein_coding synonymous_variant LOW 186T>A Ala62Ala
M0192923 FDAKEDKI_00016 13806 7 Gut 1.00 protein_coding synonymous_variant LOW 442T>C Leu148Leu
M0192924 FDAKEDKI_00016 13900 7 Gut 1.00 protein_coding synonymous_variant LOW 348A>G Leu116Leu
M0192925 FDAKEDKI_00016 14059 7 Gut 1.00 protein_coding synonymous_variant LOW 189A>C Ser63Ser
M0192926 FDAKEDKI_00016 14103 7 Gut 1.00 protein_coding synonymous_variant LOW 145T>C Leu49Leu
M0192927 FDAKEDKI_00016 14134 7 Gut 1.00 protein_coding synonymous_variant LOW 114G>A Lys38Lys
M0192928 FDAKEDKI_00016 14161 7 Gut 1.00 protein_coding synonymous_variant LOW 87T>C Arg29Arg
M0192929 FDAKEDKI_00016 14239 7 Gut 1.00 protein_coding synonymous_variant LOW 9T>C Asn3Asn
M0192930 FDAKEDKI_00011 14250 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4721G>C None
M0192931 FDAKEDKI_00017 14365 7 Gut 1.00 protein_coding synonymous_variant LOW 369A>G Lys123Lys
M0192932 FDAKEDKI_00018 15306 7 Gut 1.00 protein_coding missense_variant MODERATE 52A>G Thr18Ala
M0192933 FDAKEDKI_00019 15497 7 Gut 1.00 protein_coding missense_variant MODERATE 1015G>A Val339Ile
M0192934 FDAKEDKI_00019 15936 7 Gut 1.00 protein_coding synonymous_variant LOW 576A>G Gly192Gly
M0192935 FDAKEDKI_00019 16082 7 Gut 1.00 protein_coding missense_variant MODERATE 430T>G Ser144Ala
M0192936 FDAKEDKI_00020 16544 7 Gut 1.00 protein_coding synonymous_variant LOW 1497T>C Asp499Asp
M0192937 FDAKEDKI_00020 16811 7 Gut 1.00 protein_coding synonymous_variant LOW 1230A>G Glu410Glu
M0192938 FDAKEDKI_00020 17552 7 Gut 1.00 protein_coding synonymous_variant LOW 489C>T Asp163Asp
M0192939 FDAKEDKI_00020 17603 7 Gut 1.00 protein_coding synonymous_variant LOW 438G>A Leu146Leu
M0192940 FDAKEDKI_00021 18119 7 Gut 1.00 protein_coding synonymous_variant LOW 462T>C Thr154Thr
M0192941 FDAKEDKI_00021 18142 7 Gut 1.00 protein_coding missense_variant MODERATE 439T>C Ser147Pro
M0192942 FDAKEDKI_00021 18216 7 Gut 1.00 protein_coding missense_variant MODERATE 365A>T Gln122Leu
M0192943 FDAKEDKI_00021 18317 7 Gut 1.00 protein_coding synonymous_variant LOW 264A>G Thr88Thr
M0192944 FDAKEDKI_00021 18365 7 Gut 1.00 protein_coding synonymous_variant LOW 216A>G Leu72Leu
M0192945 FDAKEDKI_00021 18446 7 Gut 1.00 protein_coding synonymous_variant LOW 135A>C Thr45Thr
M0192946 FDAKEDKI_00022 19466 7 Gut 1.00 protein_coding synonymous_variant LOW 388C>T Leu130Leu
M0192947 FDAKEDKI_00022 19523 7 Gut 1.00 protein_coding missense_variant MODERATE 331G>A Val111Ile
M0192948 FDAKEDKI_00022 19631 7 Gut 1.00 protein_coding missense_variant MODERATE 223G>A Ala75Thr
M0192949 FDAKEDKI_00022 19827 7 Gut 1.00 protein_coding synonymous_variant LOW 27T>G Arg9Arg
M0192950 FDAKEDKI_00023 19999 7 Gut 1.00 protein_coding missense_variant MODERATE 1549A>G Ile517Val
M0192951 FDAKEDKI_00023 20084 7 Gut 1.00 protein_coding synonymous_variant LOW 1464T>C Val488Val
M0192952 FDAKEDKI_00023 20641 7 Gut 1.00 protein_coding synonymous_variant LOW 907C>T Leu303Leu
M0192953 FDAKEDKI_00023 20825 7 Gut 1.00 protein_coding synonymous_variant LOW 723C>T Thr241Thr
M0192954 FDAKEDKI_00023 20969 7 Gut 1.00 protein_coding synonymous_variant LOW 579G>A Thr193Thr
M0192955 FDAKEDKI_00024 21719 7 Gut 1.00 protein_coding missense_variant MODERATE 352A>G Ile118Val
M0192956 FDAKEDKI_00025 22611 7 Gut 1.00 protein_coding missense_variant MODERATE 1465A>C Ile489Leu
M0192957 FDAKEDKI_00026 24565 7 Gut 1.00 protein_coding synonymous_variant LOW 582C>T Ser194Ser
M0192958 FDAKEDKI_00026 25057 7 Gut 1.00 protein_coding synonymous_variant LOW 90A>G Gln30Gln
M0192959 FDAKEDKI_00026 25118 7 Gut 1.00 protein_coding missense_variant MODERATE 29C>T Thr10Ile
M0192960 FDAKEDKI_00026 25125 7 Gut 1.00 protein_coding missense_variant MODERATE 22A>T Ser8Cys
M0192961 FDAKEDKI_00027 25573 7 Gut 1.00 protein_coding synonymous_variant LOW 732A>G Gly244Gly
M0192962 FDAKEDKI_00027 26034 7 Gut 1.00 protein_coding missense_variant MODERATE 271C>A Leu91Ile
M0192963 FDAKEDKI_00027 26155 7 Gut 1.00 protein_coding synonymous_variant LOW 150G>T Leu50Leu
M0192964 FDAKEDKI_00028 26438 7 Gut 1.00 protein_coding synonymous_variant LOW 627C>T Tyr209Tyr
M0192965 FDAKEDKI_00028 26693 7 Gut 1.00 protein_coding synonymous_variant LOW 372T>C Arg124Arg
M0192966 FDAKEDKI_00029 27361 7 Gut 1.00 protein_coding synonymous_variant LOW 435A>T Ser145Ser
M0192967 FDAKEDKI_00029 27499 7 Gut 1.00 protein_coding synonymous_variant LOW 297C>T Asp99Asp
M0192968 FDAKEDKI_00031 28390 7 Gut 1.00 protein_coding synonymous_variant LOW 1926C>T Phe642Phe
M0192969 FDAKEDKI_00031 29434 7 Gut 1.00 protein_coding synonymous_variant LOW 882C>T Ala294Ala
M0192970 FDAKEDKI_00031 29815 7 Gut 1.00 protein_coding synonymous_variant LOW 501G>A Glu167Glu
M0192971 FDAKEDKI_00036 32388 7 Gut 1.00 protein_coding missense_variant MODERATE 174A>C Glu58Asp
M0192972 FDAKEDKI_00037 32833 7 Gut 1.00 protein_coding missense_variant MODERATE 970A>C Ile324Leu
M0192973 FDAKEDKI_00038 34127 7 Gut 1.00 protein_coding missense_variant MODERATE 71G>C Arg24Thr
M0192974 FDAKEDKI_00038 34142 7 Gut 1.00 protein_coding missense_variant MODERATE 56A>G Tyr19Cys
M0192975 FDAKEDKI_00038 34161 7 Gut 1.00 protein_coding missense_variant MODERATE 37G>A Ala13Thr
M0192976 FDAKEDKI_00039 34481 7 Gut 1.00 protein_coding missense_variant MODERATE 419G>A Gly140Asp
M0192977 FDAKEDKI_00039 34588 7 Gut 1.00 protein_coding synonymous_variant LOW 312T>C Ser104Ser
M0192978 FDAKEDKI_00039 34605 7 Gut 1.00 protein_coding missense_variant MODERATE 295A>C Ser99Arg
M0192979 FDAKEDKI_00039 34639 7 Gut 1.00 protein_coding missense_variant MODERATE 261A>T Leu87Phe
M0192980 FDAKEDKI_00039 34677 7 Gut 1.00 protein_coding missense_variant MODERATE 223A>G Thr75Ala
M0192981 FDAKEDKI_00039 34687 7 Gut 1.00 protein_coding synonymous_variant LOW 213T>A Pro71Pro
M0192982 FDAKEDKI_00039 34704 7 Gut 1.00 protein_coding missense_variant MODERATE 196A>C Met66Leu
M0192983 FDAKEDKI_00039 34735 7 Gut 1.00 protein_coding synonymous_variant LOW 165T>C Ala55Ala
M0192984 FDAKEDKI_00039 34736 7 Gut 1.00 protein_coding missense_variant MODERATE 164C>T Ala55Val
M0192985 FDAKEDKI_00039 34786 7 Gut 1.00 protein_coding synonymous_variant LOW 114C>A Ile38Ile
M0192986 FDAKEDKI_00039 34792 7 Gut 1.00 protein_coding synonymous_variant LOW 108T>C His36His
M0192987 FDAKEDKI_00039 34800 7 Gut 1.00 protein_coding missense_variant MODERATE 100C>A His34Asn
M0192988 FDAKEDKI_00039 34802 7 Gut 1.00 protein_coding missense_variant MODERATE 98A>C Lys33Thr
M0192989 FDAKEDKI_00039 34803 7 Gut 1.00 protein_coding stop_gained HIGH 97A>T Lys33*
M0192990 FDAKEDKI_00040 35120 7 Gut 1.00 protein_coding synonymous_variant LOW 174A>G Glu58Glu
M0192991 FDAKEDKI_00040 35143 7 Gut 1.00 protein_coding missense_variant MODERATE 197T>A Leu66Gln
M0192992 FDAKEDKI_00040 35147 7 Gut 1.00 protein_coding synonymous_variant LOW 201G>A Gly67Gly
M0192993 FDAKEDKI_00040 35238 7 Gut 1.00 protein_coding missense_variant MODERATE 292C>T His98Tyr
M0192994 FDAKEDKI_00040 35255 7 Gut 1.00 protein_coding synonymous_variant LOW 309C>T Arg103Arg
M0192995 FDAKEDKI_00040 35561 7 Gut 1.00 protein_coding missense_variant MODERATE 615G>C Lys205Asn
M0192996 FDAKEDKI_00040 35633 7 Gut 1.00 protein_coding synonymous_variant LOW 687C>T Gly229Gly
M0192997 FDAKEDKI_00043 37669 7 Gut 1.00 protein_coding synonymous_variant LOW 189G>A Lys63Lys
M0192998 FDAKEDKI_00043 37672 7 Gut 1.00 protein_coding synonymous_variant LOW 186G>T Thr62Thr
M0192999 FDAKEDKI_00043 37675 7 Gut 1.00 protein_coding synonymous_variant LOW 183G>A Val61Val
M0193000 FDAKEDKI_00043 37682 7 Gut 1.00 protein_coding missense_variant MODERATE 176A>G Asn59Ser
M0193001 FDAKEDKI_00043 37687 7 Gut 1.00 protein_coding synonymous_variant LOW 171T>G Leu57Leu
M0193002 FDAKEDKI_00043 37692 7 Gut 1.00 protein_coding missense_variant MODERATE 166A>G Ile56Val
M0193003 FDAKEDKI_00043 37718 7 Gut 1.00 protein_coding missense_variant MODERATE 140A>T Tyr47Phe
M0193004 FDAKEDKI_00043 37726 7 Gut 1.00 protein_coding synonymous_variant LOW 132T>C Tyr44Tyr
M0193005 FDAKEDKI_00043 37747 7 Gut 1.00 protein_coding synonymous_variant LOW 111T>C Ala37Ala
M0193006 FDAKEDKI_00043 37750 7 Gut 1.00 protein_coding synonymous_variant LOW 108G>T Ala36Ala
M0193007 FDAKEDKI_00043 37756 7 Gut 1.00 protein_coding synonymous_variant LOW 102T>C Phe34Phe
M0193008 FDAKEDKI_00043 37774 7 Gut 1.00 protein_coding synonymous_variant LOW 84G>A Gln28Gln
M0193009 FDAKEDKI_00043 37783 7 Gut 1.00 protein_coding synonymous_variant LOW 75G>A Lys25Lys
M0193010 FDAKEDKI_00043 37829 7 Gut 1.00 protein_coding missense_variant MODERATE 29A>T Lys10Ile
M0193011 FDAKEDKI_00043 37830 7 Gut 1.00 protein_coding missense_variant MODERATE 28A>C Lys10Gln
M0193012 FDAKEDKI_00043 37838 7 Gut 1.00 protein_coding missense_variant MODERATE 20T>C Phe7Ser
M0193013 FDAKEDKI_00043 37839 7 Gut 1.00 protein_coding missense_variant MODERATE 19T>A Phe7Ile
M0193014 FDAKEDKI_00043 37843 7 Gut 1.00 protein_coding synonymous_variant LOW 15A>T Ser5Ser
M0193015 FDAKEDKI_00037 37858 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4056T>C None
M0193016 FDAKEDKI_00044 38085 7 Gut 1.00 protein_coding missense_variant MODERATE 34C>T Pro12Ser
M0193017 FDAKEDKI_00046 38499 7 Gut 1.00 protein_coding synonymous_variant LOW 150A>G Val50Val
M0193018 FDAKEDKI_00047 38808 7 Gut 1.00 protein_coding missense_variant MODERATE 56A>C Lys19Thr
M0193019 FDAKEDKI_00048 39252 7 Gut 1.00 protein_coding synonymous_variant LOW 243C>T Phe81Phe
M0193020 FDAKEDKI_00053 41505 7 Gut 1.00 protein_coding missense_variant MODERATE 191T>A Leu64Gln
M0193021 FDAKEDKI_00053 41510 7 Gut 1.00 protein_coding synonymous_variant LOW 186T>C His62His
M0193022 FDAKEDKI_00054 41800 7 Gut 1.00 protein_coding missense_variant MODERATE 341T>C Ile114Thr
M0193023 FDAKEDKI_00054 41952 7 Gut 1.00 protein_coding synonymous_variant LOW 189G>A Gln63Gln
M0193024 FDAKEDKI_00043 42707 6 Gut 0.86 protein_coding upstream_gene_variant MODIFIER -4850A>C None
M0193025 FDAKEDKI_00043 42757 6 Gut 0.86 protein_coding upstream_gene_variant MODIFIER -4900A>T None
M0193026 FDAKEDKI_00043 42824 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4967C>T None
M0193027 FDAKEDKI_00055 42861 7 Gut 1.00 protein_coding missense_variant MODERATE 310G>A Val104Ile
M0193028 FDAKEDKI_00055 42901 7 Gut 1.00 protein_coding synonymous_variant LOW 270C>T Phe90Phe
M0193029 FDAKEDKI_00055 42917 7 Gut 1.00 protein_coding missense_variant MODERATE 254C>A Pro85His
M0193030 FDAKEDKI_00055 42926 7 Gut 1.00 protein_coding missense_variant MODERATE 245C>G Thr82Ser
M0193031 FDAKEDKI_00055 43093 7 Gut 1.00 protein_coding synonymous_variant LOW 78T>C Leu26Leu
M0193032 FDAKEDKI_00055 43135 7 Gut 1.00 protein_coding missense_variant MODERATE 36C>G Asn12Lys
M0193033 FDAKEDKI_00055 43145 7 Gut 1.00 protein_coding missense_variant MODERATE 26G>C Cys9Ser
M0193034 FDAKEDKI_00055 43150 7 Gut 1.00 protein_coding synonymous_variant LOW 21T>G Leu7Leu
M0193035 FDAKEDKI_00055 43164 7 Gut 1.00 protein_coding missense_variant MODERATE 7G>A Ala3Thr
M0193036 FDAKEDKI_00055 43169 7 Gut 1.00 protein_coding start_lost HIGH 2T>G Met1?
M0193037 FDAKEDKI_00045 43190 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4773A>C None
M0193038 FDAKEDKI_00045 43205 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4788A>G None
M0193039 FDAKEDKI_00045 43210 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4793C>T None
M0193040 FDAKEDKI_00045 43211 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4794A>G None
M0193041 FDAKEDKI_00056 43276 7 Gut 1.00 protein_coding missense_variant MODERATE 5A>G Gln2Arg
M0193042 FDAKEDKI_00056 43329 7 Gut 1.00 protein_coding missense_variant MODERATE 58A>G Ile20Val
M0193043 FDAKEDKI_00056 43358 7 Gut 1.00 protein_coding synonymous_variant LOW 87A>C Gly29Gly
M0193044 FDAKEDKI_00056 43505 7 Gut 1.00 protein_coding synonymous_variant LOW 234C>T His78His
M0193045 FDAKEDKI_00056 43862 7 Gut 1.00 protein_coding synonymous_variant LOW 591T>C Asp197Asp
M0193046 FDAKEDKI_00056 43952 7 Gut 1.00 protein_coding synonymous_variant LOW 681G>A Glu227Glu
M0193047 FDAKEDKI_00056 43964 7 Gut 1.00 protein_coding synonymous_variant LOW 693G>A Lys231Lys
M0193048 FDAKEDKI_00056 43995 7 Gut 1.00 protein_coding synonymous_variant LOW 724T>C Leu242Leu
M0193049 FDAKEDKI_00056 44189 7 Gut 1.00 protein_coding synonymous_variant LOW 918G>A Lys306Lys
M0193050 FDAKEDKI_00056 44198 7 Gut 1.00 protein_coding synonymous_variant LOW 927G>A Pro309Pro
M0193051 FDAKEDKI_00056 44201 7 Gut 1.00 protein_coding synonymous_variant LOW 930G>T Pro310Pro
M0193052 FDAKEDKI_00056 44204 7 Gut 1.00 protein_coding synonymous_variant LOW 933C>T Asp311Asp
M0193053 FDAKEDKI_00056 44207 7 Gut 1.00 protein_coding synonymous_variant LOW 936A>G Glu312Glu
M0193054 FDAKEDKI_00056 44210 7 Gut 1.00 protein_coding synonymous_variant LOW 939G>A Ala313Ala
M0193055 FDAKEDKI_00056 44219 7 Gut 1.00 protein_coding synonymous_variant LOW 948C>T Cys316Cys
M0193056 FDAKEDKI_00056 44223 7 Gut 1.00 protein_coding missense_variant MODERATE 952A>C Lys318Gln
M0193057 FDAKEDKI_00056 44252 7 Gut 1.00 protein_coding synonymous_variant LOW 981A>G Arg327Arg
M0193058 FDAKEDKI_00056 44276 7 Gut 1.00 protein_coding synonymous_variant LOW 1005T>C Ala335Ala
M0193059 FDAKEDKI_00048 44309 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4815G>A None
M0193060 FDAKEDKI_00048 44430 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4936C>A None
M0193061 FDAKEDKI_00048 44487 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4993C>T None
M0193062 FDAKEDKI_00050 44732 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4610T>C None
M0193063 FDAKEDKI_00050 44771 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4649A>G None
M0193064 FDAKEDKI_00050 44857 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4735T>C None
M0193065 FDAKEDKI_00050 44861 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4739G>A None
M0193066 FDAKEDKI_00050 44862 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4740A>T None
M0193067 FDAKEDKI_00050 44894 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4772T>C None
M0193068 FDAKEDKI_00050 44895 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4773T>C None
M0193069 FDAKEDKI_00050 44896 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4774T>C None
M0193070 FDAKEDKI_00050 44923 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4801A>G None
M0193071 FDAKEDKI_00051 45128 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4704T>G None
M0193072 FDAKEDKI_00051 45168 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4744T>C None
M0193073 FDAKEDKI_00051 45198 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4774C>T None
M0193074 FDAKEDKI_00051 45294 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4870C>T None
M0193075 FDAKEDKI_00052 45524 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4045T>C None
M0193076 FDAKEDKI_00058 45685 7 Gut 1.00 protein_coding synonymous_variant LOW 36C>T Arg12Arg
M0193077 FDAKEDKI_00052 45935 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4456C>T None
M0193078 FDAKEDKI_00052 45995 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4516G>C None
M0193079 FDAKEDKI_00052 46000 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4521T>A None
M0193080 FDAKEDKI_00059 46203 7 Gut 1.00 protein_coding missense_variant MODERATE 161A>G His54Arg
M0193081 FDAKEDKI_00059 46369 7 Gut 1.00 protein_coding synonymous_variant LOW 327C>T Asp109Asp
M0193082 FDAKEDKI_00055 47675 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4505T>C None
M0193083 FDAKEDKI_00055 47711 7 Gut 1.00 protein_coding upstream_gene_variant MODIFIER -4541C>T None
M0193084 FDAKEDKI_00055 48157 5 Gut 0.71 protein_coding upstream_gene_variant MODIFIER -4987T>C None
M0193085 FDAKEDKI_00055 48158 5 Gut 0.71 protein_coding upstream_gene_variant MODIFIER -4988C>T None
M0193086 FDAKEDKI_00055 48160 5 Gut 0.71 protein_coding upstream_gene_variant MODIFIER -4990C>T None
M0193087 FDAKEDKI_00055 48170 5 Gut 0.71 protein_coding upstream_gene_variant MODIFIER -5000T>C None
M0193088 FDAKEDKI_00060 48594 5 Gut 0.71 protein_coding upstream_gene_variant MODIFIER -1677A>G None
M0193089 FDAKEDKI_00063 49143 6 Gut 0.86 protein_coding synonymous_variant LOW 168G>A Ala56Ala
M0193090 FDAKEDKI_00064 49825 6 Gut 0.86 protein_coding synonymous_variant LOW 231T>C Ser77Ser
M0193091 FDAKEDKI_00065 50315 6 Gut 0.86 protein_coding missense_variant MODERATE 182A>C Lys61Thr
M0193092 FDAKEDKI_00060 51058 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4141T>C None
M0193093 FDAKEDKI_00060 51137 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4220T>C None
M0193094 FDAKEDKI_00071 53315 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -249G>A None
M0193095 FDAKEDKI_00071 54088 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -1022G>A None
M0193096 FDAKEDKI_00075 54488 4 Gut 0.57 protein_coding synonymous_variant LOW 483A>G Val161Val
M0193097 FDAKEDKI_00075 54515 4 Gut 0.57 protein_coding synonymous_variant LOW 456A>G Gly152Gly
M0193098 FDAKEDKI_00075 54521 4 Gut 0.57 protein_coding synonymous_variant LOW 450A>G Leu150Leu
M0193099 FDAKEDKI_00075 54523 4 Gut 0.57 protein_coding synonymous_variant LOW 448C>T Leu150Leu
M0193100 FDAKEDKI_00076 55034 4 Gut 0.57 protein_coding synonymous_variant LOW 237T>C Pro79Pro
M0193101 FDAKEDKI_00080 57041 4 Gut 0.57 protein_coding synonymous_variant LOW 168G>A Leu56Leu
M0193102 FDAKEDKI_00074 58478 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4020A>G None
M0193103 FDAKEDKI_00083 59004 4 Gut 0.57 protein_coding synonymous_variant LOW 279C>T Leu93Leu
M0193104 FDAKEDKI_00074 59228 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4770G>A None
M0193105 FDAKEDKI_00075 59483 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4513C>T None
M0193106 FDAKEDKI_00075 59801 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4831A>C None
M0193107 FDAKEDKI_00075 59858 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4888C>A None
M0193108 FDAKEDKI_00075 59860 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4890G>C None
M0193109 FDAKEDKI_00075 59963 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4993C>T None
M0193110 FDAKEDKI_00076 60079 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4809C>T None
M0193111 FDAKEDKI_00076 60097 4 Gut 0.57 protein_coding upstream_gene_variant MODIFIER -4827T>G None






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
FDAKEDKI_00017 AIT37678.1|GH23 100 9.77e-113 1 160 1 1
FDAKEDKI_00023 ARK36115.2|GH23 100 0 1 547 1 1
FDAKEDKI_00034 AIR75109.1|GH23 100 1.73e-134 1 194 1 1
FDAKEDKI_00039 ARK36131.2|GH23 94.3 3.98e-137 1 211 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
FDAKEDKI_00052 8.A.21.2.2 77.7 2e-119 17 307 0.8954 0.9541 8 Accessory Factors Involved in Transport 8.A Auxiliary transport proteins 8.A.21 The Stomatin/Podocin/Band 7/Nephrosis.2/SPFH (Stomatin) Family