Cluster Information | Plasmid Cluster ID | C1073 |
Reference Plasmid | NZ_CP104280.1 | |
Reference Plasmid Size | 143067 | |
Reference Plasmid GC Content | 0.57 | |
Reference Plasmid Mobility Type | non-mobilizable |
mutid | gname | pos | count | tissue | frequnt | biotype | consequence | impact | nucchange | aachange |
---|---|---|---|---|---|---|---|---|---|---|
M0106912 | AKDFDHLG_00020 | 17398 | 7 | Skin | 0.47 | protein_coding | missense_variant | MODERATE | 146C>T | Ala49Val |
M0106913 | AKDFDHLG_00020 | 17267 | 3 | Skin | 0.20 | protein_coding | synonymous_variant | LOW | 15T>C | Leu5Leu |
M0106914 | AKDFDHLG_00021 | 19003 | 4 | Skin | 0.27 | protein_coding | synonymous_variant | LOW | 576T>C | Asp192Asp |
Gene Name | vf_gene_id | vf_name | identity | evalue | qstart | qend | query_coverage | subject_coverage | vf_category | gene_description | condition |
---|
Gene Name | compound | identity | evalue | qstart | qend | query_coverage | subject_coverage | group |
---|---|---|---|---|---|---|---|---|
AKDFDHLG_00013 | Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)] | 100 | 1.1e-60 | 1 | 115 | 1.0000 | 1.0000 | experiment |
AKDFDHLG_00029 | Arsenic (As), Antimony (Sb) | 70.7 | 2.9e-55 | 1 | 140 | 0.9790 | 0.9929 | experiment |
AKDFDHLG_00083 | Mercury (Hg) | 94.9 | 7.1e-40 | 1 | 78 | 1.0000 | 1.0000 | experiment |
AKDFDHLG_00084 | Mercury (Hg) | 95 | 3.6e-59 | 1 | 121 | 1.0000 | 1.0000 | experiment |
AKDFDHLG_00085 | Mercury (Hg) | 90.9 | 3.3e-288 | 1 | 561 | 1.0000 | 1.0000 | experiment |
AKDFDHLG_00086 | Mercury (Hg) | 100 | 2.7e-43 | 1 | 91 | 1.0000 | 1.0000 | experiment |
AKDFDHLG_00087 | Mercury (Hg) | 100 | 2.3e-63 | 1 | 116 | 1.0000 | 1.0000 | experiment |
AKDFDHLG_00088 | Mercury (Hg) | 100 | 1.7e-79 | 1 | 144 | 1.0000 | 1.0000 | experiment |
AKDFDHLG_00029 | Arsenic (As) | 72.1 | 4.6e-54 | 1 | 140 | 0.9790 | 0.9929 | prediction |
AKDFDHLG_00030 | Arsenic (As) | 84 | 2.1e-112 | 2 | 238 | 0.9958 | 0.9713 | prediction |
AKDFDHLG_00082 | Mercury (Hg) | 90.9 | 3.4e-177 | 1 | 329 | 1.0000 | 0.8044 | prediction |
AKDFDHLG_00083 | Mercury (Hg) | 100 | 2.3e-39 | 1 | 78 | 1.0000 | 1.0000 | prediction |
AKDFDHLG_00084 | Mercury (Hg) | 100 | 2.8e-60 | 1 | 121 | 1.0000 | 1.0000 | prediction |
AKDFDHLG_00085 | Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury] | 100 | 0 | 1 | 561 | 1.0000 | 1.0000 | prediction |
AKDFDHLG_00086 | Mercury (Hg) | 100 | 6.3e-41 | 1 | 91 | 1.0000 | 1.0000 | prediction |
AKDFDHLG_00087 | Mercury (Hg) | 100 | 5.3e-61 | 1 | 116 | 1.0000 | 1.0000 | prediction |
AKDFDHLG_00088 | Mercury (Hg) | 100 | 3.9e-77 | 1 | 144 | 1.0000 | 1.0000 | prediction |
Gene Name | aro_accession | identity | evalue | qstart | qend | query_coverage | subject_coverage | drug_class | amr_gene_family | resistance_mechanism |
---|---|---|---|---|---|---|---|---|---|---|
AKDFDHLG_00011 | ARO:3002861 | 100 | 1.61e-114 | 1 | 152 | 1.0000 | 0.9682 | diaminopyrimidine antibiotic | trimethoprim resistant dihydrofolate reductase dfr | antibiotic target replacement |
AKDFDHLG_00012 | ARO:3002594 | 100 | 2.6e-139 | 1 | 184 | 1.0000 | 1.0000 | aminoglycoside antibiotic | AAC(6') | antibiotic inactivation |
AKDFDHLG_00013 | ARO:3005010 | 100 | 2.01e-78 | 1 | 115 | 1.0000 | 1.0000 | disinfecting agents and antiseptics | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
AKDFDHLG_00014 | ARO:3000410 | 99.6 | 2.41e-198 | 1 | 279 | 1.0000 | 1.0000 | sulfonamide antibiotic | sulfonamide resistant sul | antibiotic target replacement |
AKDFDHLG_00020 | ARO:3002703 | 99.7 | 2.43e-252 | 1 | 391 | 1.0000 | 1.0000 | phenicol antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
AKDFDHLG_00091 | ARO:3007635 | 100 | 1.72e-214 | 1 | 302 | 1.0000 | 1.0000 | cephalosporin | CAE beta-lactamase | antibiotic inactivation |
AKDFDHLG_00096 | ARO:3003109 | 100 | 0 | 1 | 491 | 1.0000 | 1.0000 | macrolide antibiotic | msr-type ABC-F protein | antibiotic target protection |
AKDFDHLG_00097 | ARO:3003741 | 100 | 1.87e-214 | 1 | 294 | 1.0000 | 1.0000 | macrolide antibiotic | macrolide phosphotransferase (MPH) | antibiotic inactivation |
AKDFDHLG_00100 | ARO:3000410 | 99.6 | 1.64e-197 | 6 | 283 | 0.9823 | 0.9964 | sulfonamide antibiotic | sulfonamide resistant sul | antibiotic target replacement |
AKDFDHLG_00103 | ARO:3006890 | 100 | 1.25e-194 | 1 | 267 | 1.0000 | 1.0000 | carbapenem | AFM beta-lactamase | antibiotic inactivation |
AKDFDHLG_00104 | ARO:3001205 | 97.5 | 2.28e-89 | 1 | 121 | 1.0000 | 1.0000 | glycopeptide antibiotic | Bleomycin resistant protein | antibiotic inactivation |
AKDFDHLG_00114 | ARO:3000410 | 99.6 | 1.64e-197 | 6 | 283 | 0.9823 | 0.9964 | sulfonamide antibiotic | sulfonamide resistant sul | antibiotic target replacement |
Gene Name | phi_molconn_id | host gene_name | identity | evalue | qstart | qend | query_coverage | subject_coverage | host_descripton | disease_name | function | phenotype_of_mutant |
---|---|---|---|---|---|---|---|---|---|---|---|---|
AKDFDHLG_00010 | PHI:9804 | int | 100 | 4e-14 | 1 | 37 | 0.1098 | 1.0000 | rodents | gastroenteritis | integrase | reduced virulence |
AKDFDHLG_00099 | PHI:9804 | int | 100 | 3.8e-14 | 1 | 37 | 0.1160 | 1.0000 | rodents | gastroenteritis | integrase | reduced virulence |
AKDFDHLG_00103 | PHI:6347 | NDM-1 | 86.6 | 2.2e-132 | 7 | 267 | 0.9775 | 0.9667 | moths | infection | carbapenemase | unaffected pathogenicity |
AKDFDHLG_00113 | PHI:9804 | int | 100 | 3.3e-14 | 1 | 37 | 0.1317 | 1.0000 | rodents | gastroenteritis | integrase | reduced virulence |
Gene Name | cazy_id | identity | evalue | qstart | qend | query_coverage | subject_coverage |
---|---|---|---|---|---|---|---|
AKDFDHLG_00069 | WBM40480.1|GH23 | 99.4 | 2.62e-123 | 1 | 177 | 1 | 1 |
Gene Name | tcid | identity | evalue | qstart | qend | query_coverage | subject_coverage | class_field | class_term | subclass | subclass_term | family | family_term |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AKDFDHLG_00008 | 2.A.53.3.1 | 71.2 | 5.9e-176 | 1 | 468 | 0.9630 | 0.9472 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.53 | The Sulfate Permease (SulP) Family |
AKDFDHLG_00083 | 1.A.72.5.1 | 82.1 | 4.4e-33 | 1 | 78 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.72 | The Mercuric Ion Pore (Mer) Superfamily |
AKDFDHLG_00086 | 1.A.72.3.1 | 94.5 | 2.2e-39 | 1 | 91 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.72 | The Mercuric Ion Pore (Mer) Superfamily |
AKDFDHLG_00087 | 1.A.72.3.1 | 93.1 | 2.2e-57 | 1 | 116 | 1.0000 | 1.2747 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.72 | The Mercuric Ion Pore (Mer) Superfamily |