Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1143
  Reference Plasmid   NZ_CP121484.1
  Reference Plasmid Size   45208
  Reference Plasmid GC Content   0.30
  Reference Plasmid Mobility Type   mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0109689 PIBPIHBH_00034 25550 8 Skin 0.26 protein_coding synonymous_variant LOW 93A>T Leu31Leu
M0109690 PIBPIHBH_00034 25604 3 Skin 0.10 protein_coding synonymous_variant LOW 147T>C Asp49Asp
M0109691 PIBPIHBH_00034 25640 7 Skin 0.23 protein_coding synonymous_variant LOW 183T>C Pro61Pro
M0109692 PIBPIHBH_00034 25962 3 Skin 0.10 protein_coding synonymous_variant LOW 505C>T Leu169Leu
M0109693 PIBPIHBH_00034 26030 3 Skin 0.10 protein_coding synonymous_variant LOW 573C>T Phe191Phe
M0109694 PIBPIHBH_00034 26078 3 Skin 0.10 protein_coding synonymous_variant LOW 621C>T Gly207Gly
M0109695 PIBPIHBH_00034 26162 4 Skin 0.13 protein_coding synonymous_variant LOW 705C>T Gly235Gly
M0109696 PIBPIHBH_00034 26315 5 Skin 0.16 protein_coding synonymous_variant LOW 858T>C Phe286Phe
M0109697 PIBPIHBH_00034 26369 6 Skin 0.19 protein_coding synonymous_variant LOW 912C>T Gly304Gly
M0109698 PIBPIHBH_00034 26492 6 Skin 0.19 protein_coding synonymous_variant LOW 1035G>A Gln345Gln
M0109699 PIBPIHBH_00034 26564 6 Skin 0.19 protein_coding synonymous_variant LOW 1107T>C Ile369Ile
M0109700 PIBPIHBH_00034 26904 4 Skin 0.13 protein_coding synonymous_variant LOW 1447C>T Leu483Leu
M0109701 PIBPIHBH_00034 27044 5 Skin 0.16 protein_coding synonymous_variant LOW 1587A>C Ile529Ile
M0109702 PIBPIHBH_00034 27380 6 Skin 0.19 protein_coding synonymous_variant LOW 1923G>T Thr641Thr
M0109703 PIBPIHBH_00035 28021 6 Skin 0.19 protein_coding synonymous_variant LOW 606G>A Lys202Lys
M0109704 PIBPIHBH_00035 28363 4 Skin 0.13 protein_coding synonymous_variant LOW 948T>G Gly316Gly
M0109705 PIBPIHBH_00029 22876 5 Skin 0.16 protein_coding missense_variant MODERATE 2033T>C Ile678Thr
M0109706 PIBPIHBH_00029 22958 5 Skin 0.16 protein_coding missense_variant MODERATE 2115T>G His705Gln
M0109707 PIBPIHBH_00029 23624 4 Skin 0.13 protein_coding synonymous_variant LOW 2781A>G Thr927Thr
M0109708 PIBPIHBH_00029 23668 5 Skin 0.16 protein_coding missense_variant MODERATE 2825A>G Asp942Gly
M0109709 PIBPIHBH_00029 23782 4 Skin 0.13 protein_coding missense_variant MODERATE 2939G>A Arg980Lys
M0109710 PIBPIHBH_00029 23805 5 Skin 0.16 protein_coding missense_variant MODERATE 2962A>G Ile988Val
M0109711 PIBPIHBH_00032 24505 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -4A>G None
M0109712 PIBPIHBH_00034 25770 3 Skin 0.10 protein_coding missense_variant MODERATE 313A>G Thr105Ala
M0109713 PIBPIHBH_00002 1002 6 Skin 0.19 protein_coding missense_variant MODERATE 421A>T Ile141Leu
M0109714 PIBPIHBH_00002 1406 7 Skin 0.23 protein_coding missense_variant MODERATE 17C>T Thr6Ile
M0109715 PIBPIHBH_00002 1407 7 Skin 0.23 protein_coding missense_variant MODERATE 16A>G Thr6Ala
M0109716 PIBPIHBH_00002 1418 6 Skin 0.19 protein_coding missense_variant MODERATE 5C>T Thr2Ile
M0109717 PIBPIHBH_00001 1550 7 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -1206G>A None
M0109718 PIBPIHBH_00001 1652 6 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -1308A>T None
M0109719 PIBPIHBH_00001 1677 8 Skin 0.26 protein_coding upstream_gene_variant MODIFIER -1333T>G None
M0109720 PIBPIHBH_00003 6910 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4864C>T None
M0109721 PIBPIHBH_00003 6956 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4910G>A None
M0109722 PIBPIHBH_00003 7025 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4979G>A None
M0109723 PIBPIHBH_00004 7106 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4699G>A None
M0109724 PIBPIHBH_00013 7185 3 Skin 0.10 protein_coding synonymous_variant LOW 1240T>C Leu414Leu
M0109725 PIBPIHBH_00013 7630 4 Skin 0.13 protein_coding synonymous_variant LOW 795C>T Ser265Ser
M0109726 PIBPIHBH_00013 7699 4 Skin 0.13 protein_coding synonymous_variant LOW 726T>C Thr242Thr
M0109727 PIBPIHBH_00013 7747 4 Skin 0.13 protein_coding synonymous_variant LOW 678C>T Asn226Asn
M0109728 PIBPIHBH_00013 7840 3 Skin 0.10 protein_coding synonymous_variant LOW 585A>G Lys195Lys
M0109729 PIBPIHBH_00013 7909 4 Skin 0.13 protein_coding synonymous_variant LOW 516T>C Gly172Gly
M0109730 PIBPIHBH_00013 7948 4 Skin 0.13 protein_coding synonymous_variant LOW 477G>A Lys159Lys
M0109731 PIBPIHBH_00013 8173 4 Skin 0.13 protein_coding synonymous_variant LOW 252T>C Leu84Leu
M0109732 PIBPIHBH_00013 8176 4 Skin 0.13 protein_coding synonymous_variant LOW 249C>T Thr83Thr
M0109733 PIBPIHBH_00013 8362 4 Skin 0.13 protein_coding synonymous_variant LOW 63A>G Gly21Gly
M0109734 PIBPIHBH_00013 8404 3 Skin 0.10 protein_coding synonymous_variant LOW 21G>A Gly7Gly
M0109735 PIBPIHBH_00020 12540 4 Skin 0.13 protein_coding synonymous_variant LOW 717C>T Asn239Asn
M0109736 PIBPIHBH_00020 12562 4 Skin 0.13 protein_coding missense_variant MODERATE 739G>A Val247Ile
M0109737 PIBPIHBH_00020 12567 4 Skin 0.13 protein_coding synonymous_variant LOW 744T>A Ile248Ile
M0109738 PIBPIHBH_00020 12573 4 Skin 0.13 protein_coding synonymous_variant LOW 750G>T Gly250Gly
M0109739 PIBPIHBH_00020 12597 3 Skin 0.10 protein_coding synonymous_variant LOW 774G>T Ser258Ser
M0109740 PIBPIHBH_00020 12669 4 Skin 0.13 protein_coding synonymous_variant LOW 846C>T Asp282Asp
M0109741 PIBPIHBH_00020 12673 4 Skin 0.13 protein_coding synonymous_variant LOW 850T>C Leu284Leu
M0109742 PIBPIHBH_00020 12732 3 Skin 0.10 protein_coding synonymous_variant LOW 909T>C Ser303Ser
M0109743 PIBPIHBH_00020 12822 3 Skin 0.10 protein_coding synonymous_variant LOW 999A>T Gly333Gly
M0109744 PIBPIHBH_00021 12900 3 Skin 0.10 protein_coding synonymous_variant LOW 57A>G Val19Val
M0109745 PIBPIHBH_00021 12924 3 Skin 0.10 protein_coding synonymous_variant LOW 81A>G Lys27Lys
M0109746 PIBPIHBH_00021 12999 3 Skin 0.10 protein_coding synonymous_variant LOW 156T>C Ser52Ser
M0109747 PIBPIHBH_00013 13100 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4676A>G None
M0109748 PIBPIHBH_00022 13397 3 Skin 0.10 protein_coding missense_variant MODERATE 235T>G Ser79Ala
M0109749 PIBPIHBH_00022 13508 4 Skin 0.13 protein_coding synonymous_variant LOW 346T>C Leu116Leu
M0109750 PIBPIHBH_00022 13513 3 Skin 0.10 protein_coding synonymous_variant LOW 351C>T Gly117Gly
M0109751 PIBPIHBH_00022 13552 3 Skin 0.10 protein_coding missense_variant MODERATE 390T>A Asn130Lys
M0109752 PIBPIHBH_00023 13606 3 Skin 0.10 protein_coding missense_variant MODERATE 29C>T Thr10Ile
M0109753 PIBPIHBH_00023 13664 3 Skin 0.10 protein_coding synonymous_variant LOW 87G>A Leu29Leu
M0109754 PIBPIHBH_00023 13667 3 Skin 0.10 protein_coding synonymous_variant LOW 90C>G Ala30Ala
M0109755 PIBPIHBH_00023 13670 3 Skin 0.10 protein_coding synonymous_variant LOW 93T>C Asn31Asn
M0109756 PIBPIHBH_00023 13673 3 Skin 0.10 protein_coding synonymous_variant LOW 96A>G Lys32Lys
M0109757 PIBPIHBH_00026 15281 3 Skin 0.10 protein_coding missense_variant MODERATE 94A>G Asn32Asp
M0109758 PIBPIHBH_00026 16795 3 Skin 0.10 protein_coding synonymous_variant LOW 1608G>A Lys536Lys
M0109759 PIBPIHBH_00026 16976 3 Skin 0.10 protein_coding missense_variant MODERATE 1789A>T Ile597Phe
M0109760 PIBPIHBH_00026 17002 3 Skin 0.10 protein_coding synonymous_variant LOW 1815C>T Asn605Asn
M0109761 PIBPIHBH_00026 17158 3 Skin 0.10 protein_coding synonymous_variant LOW 1971C>T Ser657Ser
M0109762 PIBPIHBH_00026 17162 3 Skin 0.10 protein_coding missense_variant MODERATE 1975A>G Ile659Val
M0109763 PIBPIHBH_00026 17203 3 Skin 0.10 protein_coding synonymous_variant LOW 2016C>T Asp672Asp
M0109764 PIBPIHBH_00026 17248 3 Skin 0.10 protein_coding synonymous_variant LOW 2061C>T His687His
M0109765 PIBPIHBH_00026 17263 3 Skin 0.10 protein_coding synonymous_variant LOW 2076A>G Glu692Glu
M0109766 PIBPIHBH_00027 17345 3 Skin 0.10 protein_coding synonymous_variant LOW 39A>G Ala13Ala
M0109767 PIBPIHBH_00027 18189 4 Skin 0.13 protein_coding missense_variant MODERATE 883G>T Ala295Ser
M0109768 PIBPIHBH_00028 18301 5 Skin 0.16 protein_coding missense_variant MODERATE 6C>A Asp2Glu
M0109769 PIBPIHBH_00028 19021 5 Skin 0.16 protein_coding synonymous_variant LOW 726C>T Asn242Asn
M0109770 PIBPIHBH_00028 19486 5 Skin 0.16 protein_coding synonymous_variant LOW 1191A>G Ser397Ser
M0109771 PIBPIHBH_00028 19795 4 Skin 0.13 protein_coding synonymous_variant LOW 1500A>C Gly500Gly
M0109772 PIBPIHBH_00028 19807 5 Skin 0.16 protein_coding missense_variant MODERATE 1512A>C Gln504His
M0109773 PIBPIHBH_00028 19861 4 Skin 0.13 protein_coding synonymous_variant LOW 1566T>C Pro522Pro
M0109774 PIBPIHBH_00028 19885 4 Skin 0.13 protein_coding synonymous_variant LOW 1590C>T Ile530Ile
M0109775 PIBPIHBH_00028 20401 3 Skin 0.10 protein_coding synonymous_variant LOW 2106C>T His702His
M0109776 PIBPIHBH_00028 20460 3 Skin 0.10 protein_coding missense_variant MODERATE 2165A>G Asp722Gly
M0109777 PIBPIHBH_00028 20461 3 Skin 0.10 protein_coding missense_variant MODERATE 2166T>A Asp722Glu
M0109778 PIBPIHBH_00028 20530 3 Skin 0.10 protein_coding synonymous_variant LOW 2235A>G Lys745Lys
M0109779 PIBPIHBH_00028 20662 4 Skin 0.13 protein_coding synonymous_variant LOW 2367A>T Ile789Ile
M0109780 PIBPIHBH_00029 21012 4 Skin 0.13 protein_coding missense_variant MODERATE 169A>G Ile57Val
M0109781 PIBPIHBH_00029 21090 4 Skin 0.13 protein_coding missense_variant MODERATE 247A>G Asn83Asp
M0109782 PIBPIHBH_00029 21153 5 Skin 0.16 protein_coding missense_variant MODERATE 310T>G Leu104Val
M0109783 PIBPIHBH_00029 21989 4 Skin 0.13 protein_coding synonymous_variant LOW 1146C>T Phe382Phe
M0109784 PIBPIHBH_00029 22070 4 Skin 0.13 protein_coding synonymous_variant LOW 1227A>G Gly409Gly
M0109785 PIBPIHBH_00029 22166 4 Skin 0.13 protein_coding synonymous_variant LOW 1323G>T Ala441Ala
M0109786 PIBPIHBH_00029 22383 4 Skin 0.13 protein_coding missense_variant MODERATE 1540G>T Ala514Ser
M0109787 PIBPIHBH_00029 22509 4 Skin 0.13 protein_coding missense_variant MODERATE 1666A>C Lys556Gln
M0109788 PIBPIHBH_00029 22686 3 Skin 0.10 protein_coding missense_variant MODERATE 1843T>C Ser615Pro
M0109789 PIBPIHBH_00035 28477 3 Skin 0.10 protein_coding synonymous_variant LOW 1062A>C Ile354Ile
M0109790 PIBPIHBH_00036 28568 3 Skin 0.10 protein_coding missense_variant MODERATE 34A>G Ile12Val
M0109791 PIBPIHBH_00036 28571 4 Skin 0.13 protein_coding missense_variant MODERATE 37G>A Val13Ile
M0109792 PIBPIHBH_00036 28580 3 Skin 0.10 protein_coding missense_variant MODERATE 46A>G Ile16Val
M0109793 PIBPIHBH_00036 28609 3 Skin 0.10 protein_coding synonymous_variant LOW 75T>C Ile25Ile
M0109794 PIBPIHBH_00036 28621 3 Skin 0.10 protein_coding synonymous_variant LOW 87G>A Gln29Gln
M0109795 PIBPIHBH_00036 28625 3 Skin 0.10 protein_coding missense_variant MODERATE 91A>G Ser31Gly
M0109796 PIBPIHBH_00036 28675 4 Skin 0.13 protein_coding synonymous_variant LOW 141A>G Lys47Lys
M0109797 PIBPIHBH_00038 32654 3 Skin 0.10 protein_coding synonymous_variant LOW 2217C>T Asn739Asn
M0109798 PIBPIHBH_00038 32696 3 Skin 0.10 protein_coding synonymous_variant LOW 2259G>A Glu753Glu
M0109799 PIBPIHBH_00038 32751 3 Skin 0.10 protein_coding missense_variant MODERATE 2314A>T Thr772Ser
M0109800 PIBPIHBH_00038 32862 4 Skin 0.13 protein_coding missense_variant MODERATE 2425A>C Ser809Arg
M0109801 PIBPIHBH_00040 34299 3 Skin 0.10 protein_coding missense_variant MODERATE 88A>G Thr30Ala
M0109802 PIBPIHBH_00040 34430 3 Skin 0.10 protein_coding synonymous_variant LOW 219C>A Thr73Thr
M0109803 PIBPIHBH_00040 34431 3 Skin 0.10 protein_coding synonymous_variant LOW 220T>C Leu74Leu
M0109804 PIBPIHBH_00040 34445 3 Skin 0.10 protein_coding synonymous_variant LOW 234T>C Gly78Gly
M0109805 PIBPIHBH_00040 34469 3 Skin 0.10 protein_coding synonymous_variant LOW 258T>C Gly86Gly
M0109806 PIBPIHBH_00040 34489 3 Skin 0.10 protein_coding missense_variant MODERATE 278C>T Ala93Val
M0109807 PIBPIHBH_00040 34499 3 Skin 0.10 protein_coding synonymous_variant LOW 288C>T Tyr96Tyr
M0109808 PIBPIHBH_00040 34511 3 Skin 0.10 protein_coding synonymous_variant LOW 300G>A Leu100Leu
M0109809 PIBPIHBH_00040 34514 3 Skin 0.10 protein_coding synonymous_variant LOW 303C>T Tyr101Tyr
M0109810 PIBPIHBH_00040 34526 3 Skin 0.10 protein_coding synonymous_variant LOW 315T>C Leu105Leu
M0109811 PIBPIHBH_00040 34563 3 Skin 0.10 protein_coding missense_variant MODERATE 352A>G Asn118Asp
M0109812 PIBPIHBH_00040 34646 3 Skin 0.10 protein_coding synonymous_variant LOW 435A>T Ser145Ser
M0109813 PIBPIHBH_00040 34652 3 Skin 0.10 protein_coding synonymous_variant LOW 441T>A Gly147Gly
M0109814 PIBPIHBH_00040 34693 3 Skin 0.10 protein_coding missense_variant MODERATE 482C>T Ala161Val
M0109815 PIBPIHBH_00040 34710 3 Skin 0.10 protein_coding missense_variant MODERATE 499C>A Gln167Lys
M0109816 PIBPIHBH_00040 34727 3 Skin 0.10 protein_coding synonymous_variant LOW 516C>T Asp172Asp
M0109817 PIBPIHBH_00040 34733 3 Skin 0.10 protein_coding synonymous_variant LOW 522C>T Asn174Asn
M0109818 PIBPIHBH_00040 34795 3 Skin 0.10 protein_coding missense_variant MODERATE 584T>C Ile195Thr
M0109819 PIBPIHBH_00037 34837 3 Skin 0.10 protein_coding downstream_gene_variant MODIFIER *4732G>T None
M0109820 PIBPIHBH_00037 34839 3 Skin 0.10 protein_coding downstream_gene_variant MODIFIER *4734A>G None
M0109821 PIBPIHBH_00037 34903 3 Skin 0.10 protein_coding downstream_gene_variant MODIFIER *4798C>T None
M0109822 PIBPIHBH_00041 34923 3 Skin 0.10 protein_coding missense_variant MODERATE 173A>G Asn58Ser
M0109823 PIBPIHBH_00041 34952 3 Skin 0.10 protein_coding synonymous_variant LOW 144T>G Ala48Ala
M0109824 PIBPIHBH_00041 34956 3 Skin 0.10 protein_coding missense_variant MODERATE 140A>G Gln47Arg
M0109825 PIBPIHBH_00041 34984 3 Skin 0.10 protein_coding missense_variant MODERATE 112T>G Phe38Val
M0109826 PIBPIHBH_00041 34985 3 Skin 0.10 protein_coding synonymous_variant LOW 111G>A Glu37Glu
M0109827 PIBPIHBH_00041 35003 3 Skin 0.10 protein_coding synonymous_variant LOW 93C>T Phe31Phe
M0109828 PIBPIHBH_00041 35181 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -86C>T None
M0109829 PIBPIHBH_00041 35236 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -141T>A None
M0109830 PIBPIHBH_00041 35254 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -159A>T None
M0109831 PIBPIHBH_00042 35287 3 Skin 0.10 protein_coding synonymous_variant LOW 438T>A Ser146Ser
M0109832 PIBPIHBH_00042 35297 3 Skin 0.10 protein_coding missense_variant MODERATE 428C>A Ala143Asp
M0109833 PIBPIHBH_00042 35614 3 Skin 0.10 protein_coding synonymous_variant LOW 111C>T Tyr37Tyr
M0109834 PIBPIHBH_00042 35677 3 Skin 0.10 protein_coding synonymous_variant LOW 48T>A Leu16Leu
M0109835 PIBPIHBH_00043 35847 3 Skin 0.10 protein_coding synonymous_variant LOW 1167T>C Asp389Asp
M0109836 PIBPIHBH_00043 35851 3 Skin 0.10 protein_coding missense_variant MODERATE 1163G>A Arg388Lys
M0109837 PIBPIHBH_00043 35907 3 Skin 0.10 protein_coding synonymous_variant LOW 1107T>C Asp369Asp
M0109838 PIBPIHBH_00043 36027 3 Skin 0.10 protein_coding synonymous_variant LOW 987G>A Lys329Lys
M0109839 PIBPIHBH_00044 37770 3 Skin 0.10 protein_coding missense_variant MODERATE 494A>C Asn165Thr
M0109840 PIBPIHBH_00044 37847 3 Skin 0.10 protein_coding synonymous_variant LOW 417A>G Glu139Glu
M0109841 PIBPIHBH_00045 38365 3 Skin 0.10 protein_coding synonymous_variant LOW 222G>A Glu74Glu
M0109842 PIBPIHBH_00050 42702 4 Skin 0.13 protein_coding missense_variant MODERATE 868G>A Val290Ile
M0109843 PIBPIHBH_00050 42712 4 Skin 0.13 protein_coding missense_variant MODERATE 858T>G Asn286Lys
M0109844 PIBPIHBH_00050 42827 4 Skin 0.13 protein_coding missense_variant MODERATE 743A>G Asn248Ser
M0109845 PIBPIHBH_00050 42829 4 Skin 0.13 protein_coding synonymous_variant LOW 741G>A Lys247Lys
M0109846 PIBPIHBH_00050 42965 4 Skin 0.13 protein_coding missense_variant MODERATE 605G>A Arg202Lys
M0109847 PIBPIHBH_00050 43009 4 Skin 0.13 protein_coding synonymous_variant LOW 561T>C Asn187Asn
M0109848 PIBPIHBH_00050 43021 4 Skin 0.13 protein_coding synonymous_variant LOW 549T>C Ser183Ser
M0109849 PIBPIHBH_00050 43201 4 Skin 0.13 protein_coding missense_variant MODERATE 369A>T Leu123Phe
M0109850 PIBPIHBH_00050 43203 4 Skin 0.13 protein_coding synonymous_variant LOW 367T>C Leu123Leu
M0109851 PIBPIHBH_00050 43333 4 Skin 0.13 protein_coding synonymous_variant LOW 237G>T Thr79Thr
M0109852 PIBPIHBH_00050 43447 3 Skin 0.10 protein_coding synonymous_variant LOW 123A>G Val41Val
M0109853 PIBPIHBH_00050 43560 3 Skin 0.10 protein_coding missense_variant MODERATE 10C>A Gln4Lys
M0109854 PIBPIHBH_00001 471 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -127C>T None
M0109855 PIBPIHBH_00001 684 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -340T>A None
M0109856 PIBPIHBH_00002 779 4 Skin 0.13 protein_coding missense_variant MODERATE 644G>A Arg215Lys
M0109857 PIBPIHBH_00002 804 4 Skin 0.13 protein_coding missense_variant MODERATE 619T>C Cys207Arg
M0109858 PIBPIHBH_00002 880 5 Skin 0.16 protein_coding synonymous_variant LOW 543A>G Leu181Leu
M0109859 PIBPIHBH_00002 1087 5 Skin 0.16 protein_coding synonymous_variant LOW 336A>G Lys112Lys
M0109860 PIBPIHBH_00002 1168 5 Skin 0.16 protein_coding synonymous_variant LOW 255C>T Asp85Asp
M0109861 PIBPIHBH_00002 1324 6 Skin 0.19 protein_coding synonymous_variant LOW 99C>T Asp33Asp
M0109862 PIBPIHBH_00001 1608 5 Skin 0.16 protein_coding upstream_gene_variant MODIFIER -1264C>A None
M0109863 PIBPIHBH_00001 1736 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1392G>T None
M0109864 PIBPIHBH_00001 1738 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1394C>A None
M0109865 PIBPIHBH_00001 1739 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1395T>G None
M0109866 PIBPIHBH_00001 1741 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -1397A>C None
M0109867 PIBPIHBH_00003 1813 3 Skin 0.10 protein_coding synonymous_variant LOW 234T>A Ile78Ile
M0109868 PIBPIHBH_00003 1830 4 Skin 0.13 protein_coding missense_variant MODERATE 217A>G Asn73Asp
M0109869 PIBPIHBH_00003 1837 4 Skin 0.13 protein_coding synonymous_variant LOW 210C>T Pro70Pro
M0109870 PIBPIHBH_00003 1930 3 Skin 0.10 protein_coding synonymous_variant LOW 117G>A Arg39Arg
M0109871 PIBPIHBH_00003 1937 4 Skin 0.13 protein_coding missense_variant MODERATE 110G>A Ser37Asn
M0109872 PIBPIHBH_00005 2470 3 Skin 0.10 protein_coding synonymous_variant LOW 114A>G Glu38Glu
M0109873 PIBPIHBH_00005 2518 3 Skin 0.10 protein_coding synonymous_variant LOW 66T>C Phe22Phe
M0109874 PIBPIHBH_00001 2875 7 Skin 0.23 protein_coding upstream_gene_variant MODIFIER -2531T>C None
M0109875 PIBPIHBH_00001 2876 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2532G>T None
M0109876 PIBPIHBH_00001 2934 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2590C>T None
M0109877 PIBPIHBH_00028 20296 3 Skin 0.10 protein_coding synonymous_variant LOW 2001C>T Pro667Pro
M0109878 PIBPIHBH_00029 23078 3 Skin 0.10 protein_coding synonymous_variant LOW 2235G>A Pro745Pro
M0109879 PIBPIHBH_00034 27110 3 Skin 0.10 protein_coding synonymous_variant LOW 1653A>G Leu551Leu
M0109880 PIBPIHBH_00034 27158 4 Skin 0.13 protein_coding synonymous_variant LOW 1701A>G Glu567Glu
M0109881 PIBPIHBH_00034 27170 4 Skin 0.13 protein_coding synonymous_variant LOW 1713G>A Gln571Gln
M0109882 PIBPIHBH_00034 27236 3 Skin 0.10 protein_coding synonymous_variant LOW 1779T>C Asp593Asp
M0109883 PIBPIHBH_00034 27269 3 Skin 0.10 protein_coding synonymous_variant LOW 1812T>C Leu604Leu
M0109884 PIBPIHBH_00034 27305 4 Skin 0.13 protein_coding synonymous_variant LOW 1848A>T Ile616Ile
M0109885 PIBPIHBH_00034 27308 3 Skin 0.10 protein_coding synonymous_variant LOW 1851G>A Pro617Pro
M0109886 PIBPIHBH_00034 27314 3 Skin 0.10 protein_coding synonymous_variant LOW 1857T>C Phe619Phe
M0109887 PIBPIHBH_00034 27329 3 Skin 0.10 protein_coding synonymous_variant LOW 1872G>A Thr624Thr
M0109888 PIBPIHBH_00035 27712 3 Skin 0.10 protein_coding synonymous_variant LOW 297C>A Pro99Pro
M0109889 PIBPIHBH_00035 27826 3 Skin 0.10 protein_coding synonymous_variant LOW 411C>T Tyr137Tyr
M0109890 PIBPIHBH_00035 27832 3 Skin 0.10 protein_coding synonymous_variant LOW 417G>A Thr139Thr
M0109891 PIBPIHBH_00035 27844 3 Skin 0.10 protein_coding synonymous_variant LOW 429A>G Gly143Gly
M0109892 PIBPIHBH_00035 27856 3 Skin 0.10 protein_coding synonymous_variant LOW 441G>A Gly147Gly
M0109893 PIBPIHBH_00035 27883 3 Skin 0.10 protein_coding synonymous_variant LOW 468T>C Ile156Ile
M0109894 PIBPIHBH_00035 27892 3 Skin 0.10 protein_coding synonymous_variant LOW 477T>C Gly159Gly
M0109895 PIBPIHBH_00035 27919 3 Skin 0.10 protein_coding synonymous_variant LOW 504T>A Pro168Pro
M0109896 PIBPIHBH_00035 27931 3 Skin 0.10 protein_coding synonymous_variant LOW 516A>C Pro172Pro
M0109897 PIBPIHBH_00035 27937 3 Skin 0.10 protein_coding synonymous_variant LOW 522A>G Gly174Gly
M0109898 PIBPIHBH_00035 27943 3 Skin 0.10 protein_coding synonymous_variant LOW 528T>C Ser176Ser
M0109899 PIBPIHBH_00035 27970 3 Skin 0.10 protein_coding synonymous_variant LOW 555C>T Asn185Asn
M0109900 PIBPIHBH_00035 28003 3 Skin 0.10 protein_coding synonymous_variant LOW 588A>G Gln196Gln
M0109901 PIBPIHBH_00014 9168 3 Skin 0.10 protein_coding synonymous_variant LOW 186G>T Ala62Ala
M0109902 PIBPIHBH_00027 17871 3 Skin 0.10 protein_coding missense_variant MODERATE 565G>T Ala189Ser
M0109903 PIBPIHBH_00028 19099 3 Skin 0.10 protein_coding synonymous_variant LOW 804A>G Thr268Thr
M0109904 PIBPIHBH_00028 19247 3 Skin 0.10 protein_coding synonymous_variant LOW 952C>T Leu318Leu
M0109905 PIBPIHBH_00028 19258 3 Skin 0.10 protein_coding synonymous_variant LOW 963A>G Leu321Leu
M0109906 PIBPIHBH_00028 19561 3 Skin 0.10 protein_coding synonymous_variant LOW 1266C>T Tyr422Tyr
M0109907 PIBPIHBH_00028 19921 3 Skin 0.10 protein_coding synonymous_variant LOW 1626G>A Leu542Leu
M0109908 PIBPIHBH_00028 19936 3 Skin 0.10 protein_coding synonymous_variant LOW 1641C>T Ala547Ala
M0109909 PIBPIHBH_00028 19939 3 Skin 0.10 protein_coding synonymous_variant LOW 1644A>G Ser548Ser
M0109910 PIBPIHBH_00028 19957 3 Skin 0.10 protein_coding synonymous_variant LOW 1662C>T Asn554Asn
M0109911 PIBPIHBH_00028 19993 3 Skin 0.10 protein_coding synonymous_variant LOW 1698C>T Asp566Asp
M0109912 PIBPIHBH_00028 20053 3 Skin 0.10 protein_coding synonymous_variant LOW 1758G>A Gly586Gly
M0109913 PIBPIHBH_00028 20059 3 Skin 0.10 protein_coding synonymous_variant LOW 1764T>C Asn588Asn
M0109914 PIBPIHBH_00028 20086 3 Skin 0.10 protein_coding synonymous_variant LOW 1791T>A Ser597Ser
M0109915 PIBPIHBH_00028 20087 3 Skin 0.10 protein_coding synonymous_variant LOW 1792C>T Leu598Leu
M0109916 PIBPIHBH_00028 20125 3 Skin 0.10 protein_coding synonymous_variant LOW 1830G>A Ala610Ala
M0109917 PIBPIHBH_00028 20140 3 Skin 0.10 protein_coding synonymous_variant LOW 1845C>T Gly615Gly
M0109918 PIBPIHBH_00028 20179 3 Skin 0.10 protein_coding synonymous_variant LOW 1884C>T Thr628Thr
M0109919 PIBPIHBH_00049 41858 3 Skin 0.10 protein_coding synonymous_variant LOW 333G>A Ala111Ala
M0109920 PIBPIHBH_00050 42334 3 Skin 0.10 protein_coding synonymous_variant LOW 1236G>A Leu412Leu
M0109921 PIBPIHBH_00050 42672 3 Skin 0.10 protein_coding missense_variant MODERATE 898A>G Asn300Asp
M0109922 PIBPIHBH_00050 42700 3 Skin 0.10 protein_coding synonymous_variant LOW 870A>T Val290Val
M0109923 PIBPIHBH_00050 42714 3 Skin 0.10 protein_coding missense_variant MODERATE 856A>G Asn286Asp
M0109924 PIBPIHBH_00050 42738 3 Skin 0.10 protein_coding missense_variant MODERATE 832G>A Glu278Lys
M0109925 PIBPIHBH_00050 42759 3 Skin 0.10 protein_coding missense_variant MODERATE 811G>A Glu271Lys
M0109926 PIBPIHBH_00050 42760 3 Skin 0.10 protein_coding synonymous_variant LOW 810T>A Val270Val
M0109927 PIBPIHBH_00050 42775 3 Skin 0.10 protein_coding synonymous_variant LOW 795T>C Asp265Asp
M0109928 PIBPIHBH_00050 42823 3 Skin 0.10 protein_coding missense_variant MODERATE 747A>T Arg249Ser
M0109929 PIBPIHBH_00050 42825 3 Skin 0.10 protein_coding missense_variant MODERATE 745A>G Arg249Gly
M0109930 PIBPIHBH_00050 42826 3 Skin 0.10 protein_coding synonymous_variant LOW 744C>T Asn248Asn
M0109931 PIBPIHBH_00050 42844 3 Skin 0.10 protein_coding synonymous_variant LOW 726C>A Val242Val
M0109932 PIBPIHBH_00050 43036 3 Skin 0.10 protein_coding synonymous_variant LOW 534C>T Ile178Ile
M0109933 PIBPIHBH_00050 43086 3 Skin 0.10 protein_coding missense_variant MODERATE 484C>A His162Asn
M0109934 PIBPIHBH_00050 43089 3 Skin 0.10 protein_coding missense_variant MODERATE 481A>G Asn161Asp
M0109935 PIBPIHBH_00050 43108 3 Skin 0.10 protein_coding synonymous_variant LOW 462A>G Lys154Lys
M0109936 PIBPIHBH_00050 43125 3 Skin 0.10 protein_coding missense_variant MODERATE 445A>G Ile149Val
M0109937 PIBPIHBH_00050 43138 3 Skin 0.10 protein_coding synonymous_variant LOW 432C>T Ala144Ala
M0109938 PIBPIHBH_00050 43153 3 Skin 0.10 protein_coding synonymous_variant LOW 417A>T Pro139Pro
M0109939 PIBPIHBH_00050 43173 3 Skin 0.10 protein_coding synonymous_variant LOW 397T>C Leu133Leu
M0109940 PIBPIHBH_00050 43207 3 Skin 0.10 protein_coding synonymous_variant LOW 363A>G Gln121Gln
M0109941 PIBPIHBH_00050 43210 3 Skin 0.10 protein_coding synonymous_variant LOW 360T>C Asn120Asn
M0109942 PIBPIHBH_00050 43224 3 Skin 0.10 protein_coding missense_variant MODERATE 346G>A Val116Ile
M0109943 PIBPIHBH_00050 43285 3 Skin 0.10 protein_coding synonymous_variant LOW 285C>T Asn95Asn
M0109944 PIBPIHBH_00050 43296 3 Skin 0.10 protein_coding missense_variant MODERATE 274A>C Lys92Gln
M0109945 PIBPIHBH_00050 43327 3 Skin 0.10 protein_coding synonymous_variant LOW 243C>T Ser81Ser
M0109946 PIBPIHBH_00050 43336 3 Skin 0.10 protein_coding synonymous_variant LOW 234A>G Thr78Thr
M0109947 PIBPIHBH_00005 2456 4 Skin 0.13 protein_coding missense_variant MODERATE 128C>A Ser43Tyr
M0109948 PIBPIHBH_00001 2615 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2271A>T None
M0109949 PIBPIHBH_00001 2844 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2500A>T None
M0109950 PIBPIHBH_00001 2864 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2520C>T None
M0109951 PIBPIHBH_00001 2889 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2545A>C None
M0109952 PIBPIHBH_00001 2892 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2548A>C None
M0109953 PIBPIHBH_00001 2893 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2549A>T None
M0109954 PIBPIHBH_00001 2894 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2550C>T None
M0109955 PIBPIHBH_00001 2897 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2553A>C None
M0109956 PIBPIHBH_00001 2904 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2560T>A None
M0109957 PIBPIHBH_00001 2905 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2561A>C None
M0109958 PIBPIHBH_00001 2907 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2563T>G None
M0109959 PIBPIHBH_00001 2910 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2566C>T None
M0109960 PIBPIHBH_00001 3187 4 Skin 0.13 protein_coding upstream_gene_variant MODIFIER -2843G>A None
M0109961 PIBPIHBH_00001 3200 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2856T>A None
M0109962 PIBPIHBH_00001 3210 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2866T>C None
M0109963 PIBPIHBH_00001 3212 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2868T>C None
M0109964 PIBPIHBH_00001 3213 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2869T>A None
M0109965 PIBPIHBH_00001 3221 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2877C>T None
M0109966 PIBPIHBH_00001 3228 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2884A>G None
M0109967 PIBPIHBH_00001 3240 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2896A>G None
M0109968 PIBPIHBH_00001 3276 3 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -2932A>G None
M0109969 PIBPIHBH_00003 1987 3 Skin 0.10 protein_coding missense_variant MODERATE 60C>A Asn20Lys
M0109970 PIBPIHBH_00004 2290 3 Skin 0.10 protein_coding missense_variant MODERATE 118A>C Lys40Gln






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
PIBPIHBH_00035 QQF49007.1|GH73 100 1.47e-263 1 368 1 1
FMKIJFEJ_00035 QQF49007.1|GH73 100 1.47e-263 1 368 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term