Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1145
  Reference Plasmid   NZ_CP121498.1
  Reference Plasmid Size   24920
  Reference Plasmid GC Content   0.28
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0110002 GOKEGNIK_00025 17805 5 Skin 0.19 protein_coding missense_variant MODERATE 249A>C Leu83Phe
M0110003 GOKEGNIK_00008 5490 5 Skin 0.19 protein_coding missense_variant MODERATE 22G>A Val8Ile
M0110004 GOKEGNIK_00002 1086 4 Skin 0.15 protein_coding missense_variant MODERATE 5T>C Phe2Ser
M0110005 GOKEGNIK_00002 1098 3 Skin 0.11 protein_coding missense_variant MODERATE 17T>A Leu6His
M0110006 GOKEGNIK_00002 1136 3 Skin 0.11 protein_coding missense_variant MODERATE 55G>A Glu19Lys
M0110007 GOKEGNIK_00003 1183 3 Skin 0.11 protein_coding missense_variant MODERATE 228T>A Asn76Lys
M0110008 GOKEGNIK_00002 1195 3 Skin 0.11 protein_coding synonymous_variant LOW 114T>C Phe38Phe
M0110009 GOKEGNIK_00002 1206 3 Skin 0.11 protein_coding missense_variant MODERATE 125T>C Phe42Ser
M0110010 GOKEGNIK_00002 1225 3 Skin 0.11 protein_coding synonymous_variant LOW 144A>T Thr48Thr
M0110011 GOKEGNIK_00002 1229 3 Skin 0.11 protein_coding missense_variant MODERATE 148A>C Thr50Pro
M0110012 GOKEGNIK_00002 1260 3 Skin 0.11 protein_coding missense_variant MODERATE 179T>C Val60Ala
M0110013 GOKEGNIK_00003 1271 3 Skin 0.11 protein_coding missense_variant MODERATE 140C>T Ser47Leu
M0110014 GOKEGNIK_00003 1283 3 Skin 0.11 protein_coding missense_variant MODERATE 128A>G Glu43Gly
M0110015 GOKEGNIK_00003 1293 3 Skin 0.11 protein_coding missense_variant MODERATE 118T>C Phe40Leu
M0110016 GOKEGNIK_00003 1333 4 Skin 0.15 protein_coding synonymous_variant LOW 78G>A Arg26Arg
M0110017 GOKEGNIK_00003 1335 4 Skin 0.15 protein_coding missense_variant MODERATE 76A>G Arg26Gly
M0110018 GOKEGNIK_00003 1368 4 Skin 0.15 protein_coding missense_variant MODERATE 43A>G Lys15Glu
M0110019 GOKEGNIK_00003 1393 4 Skin 0.15 protein_coding missense_variant MODERATE 18A>G Ile6Met
M0110020 GOKEGNIK_00003 1405 4 Skin 0.15 protein_coding missense_variant MODERATE 6G>T Glu2Asp
M0110021 GOKEGNIK_00003 1406 4 Skin 0.15 protein_coding missense_variant MODERATE 5A>G Glu2Gly
M0110022 GOKEGNIK_00001 1416 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -703T>C None
M0110023 GOKEGNIK_00001 1436 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -723T>C None
M0110024 GOKEGNIK_00001 1440 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -727A>G None
M0110025 GOKEGNIK_00001 1449 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -736T>C None
M0110026 GOKEGNIK_00001 1452 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -739G>T None
M0110027 GOKEGNIK_00001 1461 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -748A>G None
M0110028 GOKEGNIK_00001 1489 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -776T>C None
M0110029 GOKEGNIK_00001 1512 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -799T>C None
M0110030 GOKEGNIK_00001 1533 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -820C>A None
M0110031 GOKEGNIK_00001 1534 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -821G>T None
M0110032 GOKEGNIK_00001 1536 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -823A>G None
M0110033 GOKEGNIK_00001 1549 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -836A>G None
M0110034 GOKEGNIK_00001 1571 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -858A>G None
M0110035 GOKEGNIK_00001 1611 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -898T>G None
M0110036 GOKEGNIK_00001 1632 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -919G>A None
M0110037 GOKEGNIK_00001 1638 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -925T>A None
M0110038 GOKEGNIK_00001 1651 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -938T>C None
M0110039 GOKEGNIK_00004 1658 4 Skin 0.15 protein_coding missense_variant MODERATE 935T>A Ile312Asn
M0110040 GOKEGNIK_00004 1659 4 Skin 0.15 protein_coding missense_variant MODERATE 934A>T Ile312Phe
M0110041 GOKEGNIK_00004 1660 4 Skin 0.15 protein_coding synonymous_variant LOW 933T>C Asn311Asn
M0110042 GOKEGNIK_00004 1714 4 Skin 0.15 protein_coding synonymous_variant LOW 879T>A Thr293Thr
M0110043 GOKEGNIK_00004 1715 4 Skin 0.15 protein_coding missense_variant MODERATE 878C>T Thr293Ile
M0110044 GOKEGNIK_00004 1792 5 Skin 0.19 protein_coding synonymous_variant LOW 801A>C Gly267Gly
M0110045 GOKEGNIK_00004 1879 4 Skin 0.15 protein_coding synonymous_variant LOW 714C>T Asn238Asn
M0110046 GOKEGNIK_00004 1939 4 Skin 0.15 protein_coding synonymous_variant LOW 654A>T Gly218Gly
M0110047 GOKEGNIK_00004 1970 4 Skin 0.15 protein_coding missense_variant MODERATE 623T>C Met208Thr
M0110048 GOKEGNIK_00004 1996 4 Skin 0.15 protein_coding synonymous_variant LOW 597T>C Ser199Ser
M0110049 GOKEGNIK_00004 2074 5 Skin 0.19 protein_coding synonymous_variant LOW 519C>T Phe173Phe
M0110050 GOKEGNIK_00004 2149 5 Skin 0.19 protein_coding synonymous_variant LOW 444C>T Val148Val
M0110051 GOKEGNIK_00004 2206 5 Skin 0.19 protein_coding synonymous_variant LOW 387T>A Ile129Ile
M0110052 GOKEGNIK_00004 2210 5 Skin 0.19 protein_coding missense_variant MODERATE 383T>C Val128Ala
M0110053 GOKEGNIK_00004 2211 6 Skin 0.22 protein_coding missense_variant MODERATE 382G>A Val128Ile
M0110054 GOKEGNIK_00004 2262 6 Skin 0.22 protein_coding missense_variant MODERATE 331A>G Lys111Glu
M0110055 GOKEGNIK_00004 2274 6 Skin 0.22 protein_coding missense_variant MODERATE 319C>T Leu107Phe
M0110056 GOKEGNIK_00004 2275 5 Skin 0.19 protein_coding synonymous_variant LOW 318G>A Lys106Lys
M0110057 GOKEGNIK_00004 2320 4 Skin 0.15 protein_coding synonymous_variant LOW 273T>C Ala91Ala
M0110058 GOKEGNIK_00004 2415 4 Skin 0.15 protein_coding missense_variant MODERATE 178G>A Ala60Thr
M0110059 GOKEGNIK_00004 2452 5 Skin 0.19 protein_coding synonymous_variant LOW 141A>G Gly47Gly
M0110060 GOKEGNIK_00004 2527 4 Skin 0.15 protein_coding synonymous_variant LOW 66C>T Leu22Leu
M0110061 GOKEGNIK_00005 2615 5 Skin 0.19 protein_coding missense_variant MODERATE 370G>A Ala124Thr
M0110062 GOKEGNIK_00005 2625 4 Skin 0.15 protein_coding synonymous_variant LOW 360A>C Val120Val
M0110063 GOKEGNIK_00005 2646 5 Skin 0.19 protein_coding synonymous_variant LOW 339T>C Ile113Ile
M0110064 GOKEGNIK_00005 2670 4 Skin 0.15 protein_coding synonymous_variant LOW 315A>G Glu105Glu
M0110065 GOKEGNIK_00005 2687 4 Skin 0.15 protein_coding missense_variant MODERATE 298A>C Ile100Leu
M0110066 GOKEGNIK_00005 2714 4 Skin 0.15 protein_coding missense_variant MODERATE 271A>T Ile91Phe
M0110067 GOKEGNIK_00005 2766 5 Skin 0.19 protein_coding missense_variant MODERATE 219A>C Gln73His
M0110068 GOKEGNIK_00005 2813 6 Skin 0.22 protein_coding missense_variant MODERATE 172A>G Ile58Val
M0110069 GOKEGNIK_00006 2985 5 Skin 0.19 protein_coding missense_variant MODERATE 1168T>C Phe390Leu
M0110070 GOKEGNIK_00006 3001 4 Skin 0.15 protein_coding missense_variant MODERATE 1152G>T Lys384Asn
M0110071 GOKEGNIK_00006 3003 5 Skin 0.19 protein_coding missense_variant MODERATE 1150A>G Lys384Glu
M0110072 GOKEGNIK_00006 3054 6 Skin 0.22 protein_coding missense_variant MODERATE 1099G>A Ala367Thr
M0110073 GOKEGNIK_00006 3109 4 Skin 0.15 protein_coding synonymous_variant LOW 1044A>G Leu348Leu
M0110074 GOKEGNIK_00006 3211 4 Skin 0.15 protein_coding synonymous_variant LOW 942C>A Gly314Gly
M0110075 GOKEGNIK_00006 3214 5 Skin 0.19 protein_coding synonymous_variant LOW 939G>A Glu313Glu
M0110076 GOKEGNIK_00006 3249 5 Skin 0.19 protein_coding missense_variant MODERATE 904A>C Lys302Gln
M0110077 GOKEGNIK_00006 3252 5 Skin 0.19 protein_coding missense_variant MODERATE 901A>G Ser301Gly
M0110078 GOKEGNIK_00006 3259 5 Skin 0.19 protein_coding synonymous_variant LOW 894A>G Glu298Glu
M0110079 GOKEGNIK_00006 3331 4 Skin 0.15 protein_coding synonymous_variant LOW 822A>G Lys274Lys
M0110080 GOKEGNIK_00006 3486 5 Skin 0.19 protein_coding missense_variant MODERATE 667T>A Leu223Ile
M0110081 GOKEGNIK_00006 3550 5 Skin 0.19 protein_coding synonymous_variant LOW 603T>C Gly201Gly
M0110082 GOKEGNIK_00006 3556 5 Skin 0.19 protein_coding synonymous_variant LOW 597T>C Val199Val
M0110083 GOKEGNIK_00006 3658 4 Skin 0.15 protein_coding synonymous_variant LOW 495G>A Leu165Leu
M0110084 GOKEGNIK_00006 3751 5 Skin 0.19 protein_coding synonymous_variant LOW 402C>T Asn134Asn
M0110085 GOKEGNIK_00006 4022 5 Skin 0.19 protein_coding missense_variant MODERATE 131A>T Tyr44Phe
M0110086 GOKEGNIK_00006 4088 4 Skin 0.15 protein_coding missense_variant MODERATE 65C>T Ser22Phe
M0110087 GOKEGNIK_00006 4120 5 Skin 0.19 protein_coding missense_variant MODERATE 33T>G Asn11Lys
M0110088 GOKEGNIK_00006 4141 4 Skin 0.15 protein_coding synonymous_variant LOW 12C>T Pro4Pro
M0110089 GOKEGNIK_00006 4147 4 Skin 0.15 protein_coding missense_variant MODERATE 6G>A Met2Ile
M0110090 GOKEGNIK_00007 4173 5 Skin 0.19 protein_coding synonymous_variant LOW 627C>T Asn209Asn
M0110091 GOKEGNIK_00007 4319 7 Skin 0.26 protein_coding missense_variant MODERATE 481A>G Asn161Asp
M0110092 GOKEGNIK_00007 4333 6 Skin 0.22 protein_coding missense_variant MODERATE 467G>A Ser156Asn
M0110093 GOKEGNIK_00007 4340 5 Skin 0.19 protein_coding missense_variant MODERATE 460C>T Pro154Ser
M0110094 GOKEGNIK_00007 4365 6 Skin 0.22 protein_coding synonymous_variant LOW 435T>A Ser145Ser
M0110095 GOKEGNIK_00007 4377 7 Skin 0.26 protein_coding synonymous_variant LOW 423C>T Ser141Ser
M0110096 GOKEGNIK_00007 4380 5 Skin 0.19 protein_coding synonymous_variant LOW 420T>G Gly140Gly
M0110097 GOKEGNIK_00007 4383 7 Skin 0.26 protein_coding synonymous_variant LOW 417C>G Gly139Gly
M0110098 GOKEGNIK_00007 4434 6 Skin 0.22 protein_coding synonymous_variant LOW 366T>C Asp122Asp
M0110099 GOKEGNIK_00007 4497 7 Skin 0.26 protein_coding synonymous_variant LOW 303C>T Tyr101Tyr
M0110100 GOKEGNIK_00007 4509 7 Skin 0.26 protein_coding synonymous_variant LOW 291C>T Asn97Asn
M0110101 GOKEGNIK_00007 4527 6 Skin 0.22 protein_coding missense_variant MODERATE 273A>G Ile91Met
M0110102 GOKEGNIK_00007 4587 7 Skin 0.26 protein_coding synonymous_variant LOW 213T>C Ala71Ala
M0110103 GOKEGNIK_00007 4592 6 Skin 0.22 protein_coding synonymous_variant LOW 208C>T Leu70Leu
M0110104 GOKEGNIK_00007 4604 6 Skin 0.22 protein_coding missense_variant MODERATE 196G>A Glu66Lys
M0110105 GOKEGNIK_00007 4610 7 Skin 0.26 protein_coding missense_variant MODERATE 190A>G Ile64Val
M0110106 GOKEGNIK_00007 4638 7 Skin 0.26 protein_coding synonymous_variant LOW 162G>A Val54Val
M0110107 GOKEGNIK_00007 4644 6 Skin 0.22 protein_coding synonymous_variant LOW 156A>G Ala52Ala
M0110108 GOKEGNIK_00007 4647 6 Skin 0.22 protein_coding synonymous_variant LOW 153A>G Gln51Gln
M0110109 GOKEGNIK_00007 4734 5 Skin 0.19 protein_coding synonymous_variant LOW 66G>T Gly22Gly
M0110110 GOKEGNIK_00007 4737 5 Skin 0.19 protein_coding synonymous_variant LOW 63T>C His21His
M0110111 GOKEGNIK_00007 4761 5 Skin 0.19 protein_coding synonymous_variant LOW 39G>A Lys13Lys
M0110112 GOKEGNIK_00007 4768 6 Skin 0.22 protein_coding missense_variant MODERATE 32G>A Ser11Asn
M0110113 GOKEGNIK_00007 4789 5 Skin 0.19 protein_coding missense_variant MODERATE 11C>T Ser4Leu
M0110114 GOKEGNIK_00007 4793 5 Skin 0.19 protein_coding missense_variant MODERATE 7G>C Val3Leu
M0110115 GOKEGNIK_00001 4838 5 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4125A>G None
M0110116 GOKEGNIK_00001 4841 4 Skin 0.15 protein_coding upstream_gene_variant MODIFIER -4128T>C None
M0110117 GOKEGNIK_00001 4877 5 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4164G>A None
M0110118 GOKEGNIK_00001 4880 5 Skin 0.19 protein_coding upstream_gene_variant MODIFIER -4167G>A None
M0110119 GOKEGNIK_00008 4919 6 Skin 0.22 protein_coding missense_variant MODERATE 593A>T Tyr198Phe
M0110120 GOKEGNIK_00008 4947 6 Skin 0.22 protein_coding synonymous_variant LOW 565C>T Leu189Leu
M0110121 GOKEGNIK_00008 4951 5 Skin 0.19 protein_coding missense_variant MODERATE 561G>C Glu187Asp
M0110122 GOKEGNIK_00008 4954 6 Skin 0.22 protein_coding synonymous_variant LOW 558A>G Leu186Leu
M0110123 GOKEGNIK_00008 4957 6 Skin 0.22 protein_coding synonymous_variant LOW 555G>A Val185Val
M0110124 GOKEGNIK_00008 4964 7 Skin 0.26 protein_coding missense_variant MODERATE 548C>A Thr183Asn
M0110125 GOKEGNIK_00008 4974 7 Skin 0.26 protein_coding missense_variant MODERATE 538A>G Thr180Ala
M0110126 GOKEGNIK_00008 5068 7 Skin 0.26 protein_coding synonymous_variant LOW 444A>T Val148Val
M0110127 GOKEGNIK_00008 5077 6 Skin 0.22 protein_coding synonymous_variant LOW 435C>T Ala145Ala
M0110128 GOKEGNIK_00008 5088 7 Skin 0.26 protein_coding missense_variant MODERATE 424G>C Glu142Gln
M0110129 GOKEGNIK_00008 5092 7 Skin 0.26 protein_coding synonymous_variant LOW 420C>A Gly140Gly
M0110130 GOKEGNIK_00008 5099 7 Skin 0.26 protein_coding missense_variant MODERATE 413C>A Thr138Lys
M0110131 GOKEGNIK_00008 5125 7 Skin 0.26 protein_coding synonymous_variant LOW 387A>T Thr129Thr
M0110132 GOKEGNIK_00008 5128 7 Skin 0.26 protein_coding synonymous_variant LOW 384A>G Thr128Thr
M0110133 GOKEGNIK_00008 5140 6 Skin 0.22 protein_coding synonymous_variant LOW 372C>T Thr124Thr
M0110134 GOKEGNIK_00008 5176 5 Skin 0.19 protein_coding synonymous_variant LOW 336C>A Thr112Thr
M0110135 GOKEGNIK_00008 5188 7 Skin 0.26 protein_coding synonymous_variant LOW 324T>A Gly108Gly
M0110136 GOKEGNIK_00008 5199 6 Skin 0.22 protein_coding missense_variant MODERATE 313A>G Ile105Val
M0110137 GOKEGNIK_00008 5215 7 Skin 0.26 protein_coding synonymous_variant LOW 297G>A Lys99Lys
M0110138 GOKEGNIK_00008 5269 7 Skin 0.26 protein_coding synonymous_variant LOW 243A>G Lys81Lys
M0110139 GOKEGNIK_00008 5274 6 Skin 0.22 protein_coding synonymous_variant LOW 238C>T Leu80Leu
M0110140 GOKEGNIK_00008 5287 6 Skin 0.22 protein_coding synonymous_variant LOW 225T>A Ser75Ser
M0110141 GOKEGNIK_00008 5377 4 Skin 0.15 protein_coding synonymous_variant LOW 135A>T Gly45Gly
M0110142 GOKEGNIK_00008 5388 6 Skin 0.22 protein_coding missense_variant MODERATE 124A>G Asn42Asp
M0110143 GOKEGNIK_00008 5419 6 Skin 0.22 protein_coding synonymous_variant LOW 93T>C Asn31Asn
M0110144 GOKEGNIK_00009 5541 7 Skin 0.26 protein_coding missense_variant MODERATE 983C>A Ala328Glu
M0110145 GOKEGNIK_00009 5558 6 Skin 0.22 protein_coding synonymous_variant LOW 966A>G Leu322Leu
M0110146 GOKEGNIK_00009 5567 6 Skin 0.22 protein_coding synonymous_variant LOW 957C>T Gly319Gly
M0110147 GOKEGNIK_00009 5586 7 Skin 0.26 protein_coding missense_variant MODERATE 938G>C Gly313Ala
M0110148 GOKEGNIK_00009 5595 4 Skin 0.15 protein_coding missense_variant MODERATE 929G>T Ser310Ile
M0110149 GOKEGNIK_00009 5630 7 Skin 0.26 protein_coding synonymous_variant LOW 894C>T Asn298Asn
M0110150 GOKEGNIK_00009 5633 4 Skin 0.15 protein_coding synonymous_variant LOW 891C>T Ile297Ile
M0110151 GOKEGNIK_00009 5672 7 Skin 0.26 protein_coding missense_variant MODERATE 852T>G Asp284Glu
M0110152 GOKEGNIK_00009 5674 7 Skin 0.26 protein_coding missense_variant MODERATE 850G>A Asp284Asn
M0110153 GOKEGNIK_00009 5675 7 Skin 0.26 protein_coding synonymous_variant LOW 849C>T Ser283Ser
M0110154 GOKEGNIK_00009 5687 7 Skin 0.26 protein_coding synonymous_variant LOW 837T>C Ala279Ala
M0110155 GOKEGNIK_00009 5734 4 Skin 0.15 protein_coding synonymous_variant LOW 790C>T Leu264Leu
M0110156 GOKEGNIK_00009 5767 7 Skin 0.26 protein_coding missense_variant MODERATE 757G>A Val253Ile
M0110157 GOKEGNIK_00009 5780 7 Skin 0.26 protein_coding missense_variant MODERATE 744A>T Glu248Asp
M0110158 GOKEGNIK_00009 5810 7 Skin 0.26 protein_coding synonymous_variant LOW 714C>T Tyr238Tyr
M0110159 GOKEGNIK_00009 5845 6 Skin 0.22 protein_coding synonymous_variant LOW 679T>C Leu227Leu
M0110160 GOKEGNIK_00009 5864 7 Skin 0.26 protein_coding synonymous_variant LOW 660T>C Tyr220Tyr
M0110161 GOKEGNIK_00009 5947 7 Skin 0.26 protein_coding missense_variant MODERATE 577T>A Leu193Met
M0110162 GOKEGNIK_00009 5953 7 Skin 0.26 protein_coding missense_variant MODERATE 571A>G Lys191Glu
M0110163 GOKEGNIK_00009 5972 4 Skin 0.15 protein_coding synonymous_variant LOW 552A>G Gly184Gly
M0110164 GOKEGNIK_00009 5975 7 Skin 0.26 protein_coding synonymous_variant LOW 549G>A Gly183Gly
M0110165 GOKEGNIK_00009 5993 7 Skin 0.26 protein_coding synonymous_variant LOW 531T>C Thr177Thr
M0110166 GOKEGNIK_00009 6010 6 Skin 0.22 protein_coding missense_variant MODERATE 514A>G Asn172Asp
M0110167 GOKEGNIK_00009 6037 7 Skin 0.26 protein_coding missense_variant MODERATE 487G>A Val163Ile
M0110168 GOKEGNIK_00009 6056 6 Skin 0.22 protein_coding synonymous_variant LOW 468C>T Asn156Asn
M0110169 GOKEGNIK_00009 6063 4 Skin 0.15 protein_coding missense_variant MODERATE 461T>C Ile154Thr
M0110170 GOKEGNIK_00009 6112 6 Skin 0.22 protein_coding missense_variant MODERATE 412A>G Asn138Asp
M0110171 GOKEGNIK_00009 6184 6 Skin 0.22 protein_coding missense_variant MODERATE 340A>G Ile114Val
M0110172 GOKEGNIK_00009 6189 7 Skin 0.26 protein_coding missense_variant MODERATE 335A>C Asp112Ala
M0110173 GOKEGNIK_00009 6190 7 Skin 0.26 protein_coding missense_variant MODERATE 334G>A Asp112Asn
M0110174 GOKEGNIK_00009 6212 4 Skin 0.15 protein_coding synonymous_variant LOW 312C>T Asn104Asn
M0110175 GOKEGNIK_00009 6259 6 Skin 0.22 protein_coding missense_variant MODERATE 265G>A Glu89Lys
M0110176 GOKEGNIK_00009 6263 7 Skin 0.26 protein_coding synonymous_variant LOW 261T>C Asn87Asn
M0110177 GOKEGNIK_00009 6293 7 Skin 0.26 protein_coding synonymous_variant LOW 231A>G Lys77Lys
M0110178 GOKEGNIK_00009 6346 6 Skin 0.22 protein_coding missense_variant MODERATE 178A>G Asn60Asp
M0110179 GOKEGNIK_00009 6374 6 Skin 0.22 protein_coding synonymous_variant LOW 150T>G Gly50Gly
M0110180 GOKEGNIK_00009 6377 7 Skin 0.26 protein_coding missense_variant MODERATE 147T>A Phe49Leu
M0110181 GOKEGNIK_00009 6413 8 Skin 0.30 protein_coding synonymous_variant LOW 111T>C Phe37Phe
M0110182 GOKEGNIK_00009 6433 7 Skin 0.26 protein_coding missense_variant MODERATE 91C>T Leu31Phe
M0110183 GOKEGNIK_00009 6482 4 Skin 0.15 protein_coding synonymous_variant LOW 42A>G Thr14Thr
M0110184 GOKEGNIK_00009 6488 7 Skin 0.26 protein_coding synonymous_variant LOW 36T>C Gly12Gly
M0110185 GOKEGNIK_00009 6512 6 Skin 0.22 protein_coding synonymous_variant LOW 12C>T His4His
M0110186 GOKEGNIK_00010 6530 7 Skin 0.26 protein_coding missense_variant MODERATE 1190A>G Glu397Gly
M0110187 GOKEGNIK_00010 6565 7 Skin 0.26 protein_coding synonymous_variant LOW 1155C>T Val385Val
M0110188 GOKEGNIK_00010 6675 7 Skin 0.26 protein_coding missense_variant MODERATE 1045G>A Val349Ile
M0110189 GOKEGNIK_00010 6715 7 Skin 0.26 protein_coding synonymous_variant LOW 1005G>A Glu335Glu
M0110190 GOKEGNIK_00010 6720 7 Skin 0.26 protein_coding synonymous_variant LOW 1000C>T Leu334Leu
M0110191 GOKEGNIK_00010 6757 7 Skin 0.26 protein_coding synonymous_variant LOW 963A>G Lys321Lys
M0110192 GOKEGNIK_00010 6898 7 Skin 0.26 protein_coding synonymous_variant LOW 822G>A Lys274Lys
M0110193 GOKEGNIK_00010 6973 7 Skin 0.26 protein_coding synonymous_variant LOW 747A>G Glu249Glu
M0110194 GOKEGNIK_00010 6998 8 Skin 0.30 protein_coding missense_variant MODERATE 722A>G Asn241Ser
M0110195 GOKEGNIK_00010 7012 8 Skin 0.30 protein_coding synonymous_variant LOW 708A>G Gly236Gly
M0110196 GOKEGNIK_00010 7039 7 Skin 0.26 protein_coding synonymous_variant LOW 681C>T Ile227Ile
M0110197 GOKEGNIK_00010 7065 3 Skin 0.11 protein_coding missense_variant MODERATE 655G>A Gly219Arg
M0110198 GOKEGNIK_00010 7093 8 Skin 0.30 protein_coding synonymous_variant LOW 627G>A Lys209Lys
M0110199 GOKEGNIK_00010 7248 7 Skin 0.26 protein_coding missense_variant MODERATE 472T>A Leu158Ile
M0110200 GOKEGNIK_00010 7300 8 Skin 0.30 protein_coding synonymous_variant LOW 420G>A Gly140Gly
M0110201 GOKEGNIK_00010 7364 8 Skin 0.30 protein_coding missense_variant MODERATE 356G>A Ser119Asn
M0110202 GOKEGNIK_00010 7412 6 Skin 0.22 protein_coding missense_variant MODERATE 308G>A Arg103Lys
M0110203 GOKEGNIK_00010 7510 5 Skin 0.19 protein_coding synonymous_variant LOW 210G>A Gln70Gln
M0110204 GOKEGNIK_00010 7528 8 Skin 0.30 protein_coding synonymous_variant LOW 192C>T Ser64Ser
M0110205 GOKEGNIK_00010 7636 4 Skin 0.15 protein_coding synonymous_variant LOW 84G>A Gln28Gln
M0110206 GOKEGNIK_00011 7777 7 Skin 0.26 protein_coding missense_variant MODERATE 331G>A Glu111Lys
M0110207 GOKEGNIK_00011 7802 6 Skin 0.22 protein_coding synonymous_variant LOW 306C>T His102His
M0110208 GOKEGNIK_00011 7814 7 Skin 0.26 protein_coding synonymous_variant LOW 294C>T Asn98Asn
M0110209 GOKEGNIK_00011 7831 7 Skin 0.26 protein_coding missense_variant MODERATE 277G>A Asp93Asn
M0110210 GOKEGNIK_00011 7838 7 Skin 0.26 protein_coding synonymous_variant LOW 270C>T Thr90Thr
M0110211 GOKEGNIK_00011 7840 7 Skin 0.26 protein_coding missense_variant MODERATE 268A>T Thr90Ser
M0110212 GOKEGNIK_00011 7841 7 Skin 0.26 protein_coding missense_variant MODERATE 267A>T Lys89Asn
M0110213 GOKEGNIK_00011 7872 7 Skin 0.26 protein_coding missense_variant MODERATE 236C>A Thr79Lys
M0110214 GOKEGNIK_00011 7955 7 Skin 0.26 protein_coding synonymous_variant LOW 153A>G Glu51Glu
M0110215 GOKEGNIK_00011 7973 7 Skin 0.26 protein_coding synonymous_variant LOW 135G>A Leu45Leu
M0110216 GOKEGNIK_00011 7987 6 Skin 0.22 protein_coding missense_variant MODERATE 121C>A Leu41Ile
M0110217 GOKEGNIK_00011 7994 7 Skin 0.26 protein_coding synonymous_variant LOW 114T>C Asn38Asn
M0110218 GOKEGNIK_00011 8009 6 Skin 0.22 protein_coding synonymous_variant LOW 99A>G Gly33Gly
M0110219 GOKEGNIK_00011 8012 6 Skin 0.22 protein_coding synonymous_variant LOW 96T>C Gly32Gly
M0110220 GOKEGNIK_00011 8032 6 Skin 0.22 protein_coding missense_variant MODERATE 76G>A Glu26Lys
M0110221 GOKEGNIK_00011 8039 7 Skin 0.26 protein_coding synonymous_variant LOW 69T>C His23His
M0110222 GOKEGNIK_00011 8054 6 Skin 0.22 protein_coding synonymous_variant LOW 54T>C Phe18Phe
M0110223 GOKEGNIK_00012 8226 7 Skin 0.26 protein_coding synonymous_variant LOW 1269A>G Ala423Ala
M0110224 GOKEGNIK_00012 8235 6 Skin 0.22 protein_coding synonymous_variant LOW 1260A>C Thr420Thr
M0110225 GOKEGNIK_00012 8298 7 Skin 0.26 protein_coding synonymous_variant LOW 1197A>G Leu399Leu
M0110226 GOKEGNIK_00012 8313 7 Skin 0.26 protein_coding synonymous_variant LOW 1182T>A Ile394Ile
M0110227 GOKEGNIK_00012 8358 6 Skin 0.22 protein_coding synonymous_variant LOW 1137G>A Leu379Leu
M0110228 GOKEGNIK_00012 8460 8 Skin 0.30 protein_coding synonymous_variant LOW 1035T>C Tyr345Tyr
M0110229 GOKEGNIK_00012 8493 8 Skin 0.30 protein_coding synonymous_variant LOW 1002T>C Cys334Cys
M0110230 GOKEGNIK_00012 8547 9 Skin 0.33 protein_coding synonymous_variant LOW 948A>G Glu316Glu
M0110231 GOKEGNIK_00012 8577 8 Skin 0.30 protein_coding synonymous_variant LOW 918C>G Gly306Gly
M0110232 GOKEGNIK_00012 8589 6 Skin 0.22 protein_coding synonymous_variant LOW 906G>A Ala302Ala
M0110233 GOKEGNIK_00012 8602 9 Skin 0.33 protein_coding missense_variant MODERATE 893C>T Ala298Val
M0110234 GOKEGNIK_00012 8678 8 Skin 0.30 protein_coding missense_variant MODERATE 817T>A Ser273Thr
M0110235 GOKEGNIK_00012 8739 8 Skin 0.30 protein_coding synonymous_variant LOW 756A>G Val252Val
M0110236 GOKEGNIK_00012 8775 6 Skin 0.22 protein_coding synonymous_variant LOW 720G>A Glu240Glu
M0110237 GOKEGNIK_00012 8859 9 Skin 0.33 protein_coding synonymous_variant LOW 636A>G Glu212Glu
M0110238 GOKEGNIK_00012 8876 8 Skin 0.30 protein_coding missense_variant MODERATE 619G>A Val207Ile
M0110239 GOKEGNIK_00012 8904 9 Skin 0.33 protein_coding synonymous_variant LOW 591G>T Gly197Gly
M0110240 GOKEGNIK_00012 9111 7 Skin 0.26 protein_coding synonymous_variant LOW 384T>C Asn128Asn
M0110241 GOKEGNIK_00012 9225 4 Skin 0.15 protein_coding synonymous_variant LOW 270A>T Pro90Pro
M0110242 GOKEGNIK_00012 9228 4 Skin 0.15 protein_coding synonymous_variant LOW 267A>T Thr89Thr
M0110243 GOKEGNIK_00012 9276 4 Skin 0.15 protein_coding missense_variant MODERATE 219A>T Gln73His
M0110244 GOKEGNIK_00012 9282 4 Skin 0.15 protein_coding synonymous_variant LOW 213G>A Lys71Lys
M0110245 GOKEGNIK_00012 9294 4 Skin 0.15 protein_coding synonymous_variant LOW 201T>C Asp67Asp
M0110246 GOKEGNIK_00012 9351 7 Skin 0.26 protein_coding synonymous_variant LOW 144C>T Tyr48Tyr
M0110247 GOKEGNIK_00012 9357 7 Skin 0.26 protein_coding synonymous_variant LOW 138T>C His46His
M0110248 GOKEGNIK_00012 9360 8 Skin 0.30 protein_coding synonymous_variant LOW 135T>C Tyr45Tyr
M0110249 GOKEGNIK_00012 9399 8 Skin 0.30 protein_coding synonymous_variant LOW 96T>C Tyr32Tyr
M0110250 GOKEGNIK_00012 9408 5 Skin 0.19 protein_coding synonymous_variant LOW 87G>A Thr29Thr
M0110251 GOKEGNIK_00012 9469 7 Skin 0.26 protein_coding missense_variant MODERATE 26A>C Lys9Thr
M0110252 GOKEGNIK_00013 9548 4 Skin 0.15 protein_coding missense_variant MODERATE 674C>T Thr225Met
M0110253 GOKEGNIK_00013 9661 6 Skin 0.22 protein_coding synonymous_variant LOW 561G>T Pro187Pro
M0110254 GOKEGNIK_00013 9673 4 Skin 0.15 protein_coding synonymous_variant LOW 549C>T Gly183Gly
M0110255 GOKEGNIK_00013 9740 6 Skin 0.22 protein_coding missense_variant MODERATE 482A>G Asn161Ser
M0110256 GOKEGNIK_00013 9741 6 Skin 0.22 protein_coding missense_variant MODERATE 481A>C Asn161His
M0110257 GOKEGNIK_00013 9768 3 Skin 0.11 protein_coding missense_variant MODERATE 454A>G Ile152Val
M0110258 GOKEGNIK_00013 9810 6 Skin 0.22 protein_coding missense_variant MODERATE 412G>A Glu138Lys
M0110259 GOKEGNIK_00013 9822 9 Skin 0.33 protein_coding missense_variant MODERATE 400T>A Tyr134Asn
M0110260 GOKEGNIK_00013 9835 3 Skin 0.11 protein_coding synonymous_variant LOW 387T>C Asp129Asp
M0110261 GOKEGNIK_00013 9851 4 Skin 0.15 protein_coding missense_variant MODERATE 371G>A Ser124Asn
M0110262 GOKEGNIK_00013 9873 3 Skin 0.11 protein_coding missense_variant MODERATE 349G>A Glu117Lys
M0110263 GOKEGNIK_00013 9897 3 Skin 0.11 protein_coding missense_variant MODERATE 325A>G Ser109Gly
M0110264 GOKEGNIK_00013 9911 6 Skin 0.22 protein_coding missense_variant MODERATE 311T>C Phe104Ser
M0110265 GOKEGNIK_00013 9940 3 Skin 0.11 protein_coding synonymous_variant LOW 282G>A Lys94Lys
M0110266 GOKEGNIK_00013 9949 3 Skin 0.11 protein_coding synonymous_variant LOW 273T>C Asp91Asp
M0110267 GOKEGNIK_00013 10003 6 Skin 0.22 protein_coding synonymous_variant LOW 219A>G Val73Val
M0110268 GOKEGNIK_00013 10008 3 Skin 0.11 protein_coding missense_variant MODERATE 214G>A Val72Ile
M0110269 GOKEGNIK_00013 10171 3 Skin 0.11 protein_coding synonymous_variant LOW 51A>T Thr17Thr
M0110270 GOKEGNIK_00014 10236 5 Skin 0.19 protein_coding splice_region_variant&stop_retained_variant LOW 570A>G Ter190Ter
M0110271 GOKEGNIK_00014 10365 5 Skin 0.19 protein_coding missense_variant MODERATE 441G>T Glu147Asp
M0110272 GOKEGNIK_00014 10374 5 Skin 0.19 protein_coding synonymous_variant LOW 432C>T Asn144Asn
M0110273 GOKEGNIK_00014 10398 5 Skin 0.19 protein_coding synonymous_variant LOW 408T>C Asn136Asn
M0110274 GOKEGNIK_00014 10419 5 Skin 0.19 protein_coding synonymous_variant LOW 387C>G Pro129Pro
M0110275 GOKEGNIK_00014 10422 5 Skin 0.19 protein_coding synonymous_variant LOW 384A>G Lys128Lys
M0110276 GOKEGNIK_00014 10539 3 Skin 0.11 protein_coding synonymous_variant LOW 267A>G Glu89Glu
M0110277 GOKEGNIK_00014 10554 3 Skin 0.11 protein_coding synonymous_variant LOW 252T>A Val84Val
M0110278 GOKEGNIK_00014 10566 3 Skin 0.11 protein_coding missense_variant MODERATE 240A>C Lys80Asn
M0110279 GOKEGNIK_00014 10626 3 Skin 0.11 protein_coding synonymous_variant LOW 180A>G Val60Val
M0110280 GOKEGNIK_00014 10671 3 Skin 0.11 protein_coding synonymous_variant LOW 135A>G Leu45Leu
M0110281 GOKEGNIK_00014 10705 3 Skin 0.11 protein_coding missense_variant MODERATE 101A>T Tyr34Phe
M0110282 GOKEGNIK_00014 10713 3 Skin 0.11 protein_coding missense_variant MODERATE 93G>T Glu31Asp
M0110283 GOKEGNIK_00014 10731 3 Skin 0.11 protein_coding synonymous_variant LOW 75A>C Leu25Leu
M0110284 GOKEGNIK_00014 10740 3 Skin 0.11 protein_coding synonymous_variant LOW 66A>G Thr22Thr
M0110285 GOKEGNIK_00014 10746 3 Skin 0.11 protein_coding synonymous_variant LOW 60A>G Glu20Glu
M0110286 GOKEGNIK_00014 10748 3 Skin 0.11 protein_coding missense_variant MODERATE 58G>A Glu20Lys
M0110287 GOKEGNIK_00014 10761 3 Skin 0.11 protein_coding synonymous_variant LOW 45T>C Asp15Asp
M0110288 GOKEGNIK_00014 10766 3 Skin 0.11 protein_coding missense_variant MODERATE 40T>G Leu14Val
M0110289 GOKEGNIK_00014 10770 3 Skin 0.11 protein_coding synonymous_variant LOW 36C>T Ser12Ser
M0110290 GOKEGNIK_00007 4196 3 Skin 0.11 protein_coding stop_gained HIGH 604G>T Glu202*
M0110291 GOKEGNIK_00009 5747 3 Skin 0.11 protein_coding synonymous_variant LOW 777G>A Glu259Glu
M0110292 GOKEGNIK_00009 6104 3 Skin 0.11 protein_coding synonymous_variant LOW 420T>C Asn140Asn
M0110293 GOKEGNIK_00012 8901 3 Skin 0.11 protein_coding synonymous_variant LOW 594T>C Asp198Asp
M0110294 GOKEGNIK_00012 8909 3 Skin 0.11 protein_coding missense_variant MODERATE 586C>A Pro196Thr






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term