Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1203
  Reference Plasmid   NZ_CP133756.1
  Reference Plasmid Size   522477
  Reference Plasmid GC Content   0.57
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0112976 MGFENGMI_00522 419173 5 Skin 0.06 protein_coding synonymous_variant LOW 468T>G Arg156Arg
M0112977 MGFENGMI_00522 419179 5 Skin 0.06 protein_coding synonymous_variant LOW 462T>C Val154Val
M0112978 MGFENGMI_00522 419200 5 Skin 0.06 protein_coding synonymous_variant LOW 441T>A Val147Val
M0112979 MGFENGMI_00522 419202 5 Skin 0.06 protein_coding missense_variant MODERATE 439G>A Val147Ile
M0112980 MGFENGMI_00522 419203 5 Skin 0.06 protein_coding synonymous_variant LOW 438G>T Gly146Gly
M0112981 MGFENGMI_00522 419211 5 Skin 0.06 protein_coding synonymous_variant LOW 430C>A Arg144Arg
M0112982 MGFENGMI_00522 419233 5 Skin 0.06 protein_coding synonymous_variant LOW 408A>G Glu136Glu
M0112983 MGFENGMI_00522 419245 5 Skin 0.06 protein_coding synonymous_variant LOW 396T>C Thr132Thr
M0112984 MGFENGMI_00522 419262 5 Skin 0.06 protein_coding synonymous_variant LOW 379T>C Leu127Leu
M0112985 MGFENGMI_00522 419284 5 Skin 0.06 protein_coding synonymous_variant LOW 357T>A Pro119Pro
M0112986 MGFENGMI_00522 419293 5 Skin 0.06 protein_coding synonymous_variant LOW 348T>A Ala116Ala
M0112987 MGFENGMI_00522 419295 5 Skin 0.06 protein_coding missense_variant MODERATE 346G>T Ala116Ser
M0112988 MGFENGMI_00522 419301 5 Skin 0.06 protein_coding synonymous_variant LOW 340C>T Leu114Leu
M0112989 MGFENGMI_00522 419322 5 Skin 0.06 protein_coding synonymous_variant LOW 319C>T Leu107Leu
M0112990 MGFENGMI_00522 419353 5 Skin 0.06 protein_coding synonymous_variant LOW 288T>C Ile96Ile
M0112991 MGFENGMI_00522 419356 5 Skin 0.06 protein_coding synonymous_variant LOW 285G>A Gly95Gly
M0112992 MGFENGMI_00522 419365 5 Skin 0.06 protein_coding synonymous_variant LOW 276T>G Gly92Gly
M0112993 MGFENGMI_00522 419380 5 Skin 0.06 protein_coding synonymous_variant LOW 261G>A Glu87Glu
M0112994 MGFENGMI_00522 419384 5 Skin 0.06 protein_coding missense_variant MODERATE 257C>T Thr86Met
M0112995 MGFENGMI_00522 419407 5 Skin 0.06 protein_coding synonymous_variant LOW 234T>C Asp78Asp
M0112996 MGFENGMI_00522 419416 5 Skin 0.06 protein_coding missense_variant MODERATE 225T>G Asp75Glu
M0112997 MGFENGMI_00522 419428 5 Skin 0.06 protein_coding synonymous_variant LOW 213G>A Arg71Arg
M0112998 MGFENGMI_00522 419485 5 Skin 0.06 protein_coding synonymous_variant LOW 156C>T Arg52Arg
M0112999 MGFENGMI_00522 419491 5 Skin 0.06 protein_coding synonymous_variant LOW 150C>T Phe50Phe
M0113000 MGFENGMI_00522 419497 5 Skin 0.06 protein_coding synonymous_variant LOW 144A>G Ser48Ser
M0113001 MGFENGMI_00522 419512 5 Skin 0.06 protein_coding synonymous_variant LOW 129T>G Thr43Thr
M0113002 MGFENGMI_00522 419536 5 Skin 0.06 protein_coding synonymous_variant LOW 105T>C Thr35Thr
M0113003 MGFENGMI_00522 419539 5 Skin 0.06 protein_coding synonymous_variant LOW 102G>T Val34Val
M0113004 MGFENGMI_00522 419548 5 Skin 0.06 protein_coding synonymous_variant LOW 93A>G Pro31Pro
M0113005 MGFENGMI_00522 419557 5 Skin 0.06 protein_coding synonymous_variant LOW 84C>T Gly28Gly
M0113006 MGFENGMI_00522 419566 5 Skin 0.06 protein_coding synonymous_variant LOW 75T>C Thr25Thr
M0113007 MGFENGMI_00522 419617 5 Skin 0.06 protein_coding synonymous_variant LOW 24T>C Val8Val
M0113008 MGFENGMI_00517 419664 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4799A>T None
M0113009 MGFENGMI_00517 419667 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4802G>A None
M0113010 MGFENGMI_00517 419677 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4812T>A None
M0113011 MGFENGMI_00517 419709 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4844A>G None
M0113012 MGFENGMI_00517 419716 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4851A>C None
M0113013 MGFENGMI_00517 419721 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4856T>C None
M0113014 MGFENGMI_00517 419746 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -4881C>T None
M0113015 MGFENGMI_00523 419783 5 Skin 0.06 protein_coding missense_variant MODERATE 35G>A Ser12Asn
M0113016 MGFENGMI_00523 419826 5 Skin 0.06 protein_coding synonymous_variant LOW 78T>C Gly26Gly
M0113017 MGFENGMI_00523 419832 5 Skin 0.06 protein_coding synonymous_variant LOW 84T>C Ser28Ser
M0113018 MGFENGMI_00523 419835 5 Skin 0.06 protein_coding synonymous_variant LOW 87C>T Ser29Ser
M0113019 MGFENGMI_00523 419839 5 Skin 0.06 protein_coding synonymous_variant LOW 91C>T Leu31Leu
M0113020 MGFENGMI_00523 419847 5 Skin 0.06 protein_coding synonymous_variant LOW 99G>A Glu33Glu
M0113021 MGFENGMI_00523 419849 5 Skin 0.06 protein_coding missense_variant MODERATE 101T>C Val34Ala
M0113022 MGFENGMI_00523 419850 5 Skin 0.06 protein_coding synonymous_variant LOW 102T>G Val34Val
M0113023 MGFENGMI_00523 419880 5 Skin 0.06 protein_coding synonymous_variant LOW 132T>G Ala44Ala
M0113024 MGFENGMI_00523 419895 5 Skin 0.06 protein_coding synonymous_variant LOW 147T>C Ala49Ala
M0113025 MGFENGMI_00523 419901 5 Skin 0.06 protein_coding synonymous_variant LOW 153T>C Arg51Arg
M0113026 MGFENGMI_00523 419929 5 Skin 0.06 protein_coding missense_variant MODERATE 181G>A Ala61Thr
M0113027 MGFENGMI_00523 419979 5 Skin 0.06 protein_coding synonymous_variant LOW 231T>C Val77Val
M0113028 MGFENGMI_00523 420033 5 Skin 0.06 protein_coding synonymous_variant LOW 285T>G Gly95Gly
M0113029 MGFENGMI_00523 420049 5 Skin 0.06 protein_coding missense_variant MODERATE 301A>G Ile101Val
M0113030 MGFENGMI_00523 420063 5 Skin 0.06 protein_coding synonymous_variant LOW 315A>G Gly105Gly
M0113031 MGFENGMI_00523 420087 5 Skin 0.06 protein_coding synonymous_variant LOW 339C>T Ser113Ser
M0113032 MGFENGMI_00523 420091 5 Skin 0.06 protein_coding missense_variant MODERATE 343A>G Thr115Ala
M0113033 MGFENGMI_00523 420092 5 Skin 0.06 protein_coding missense_variant MODERATE 344C>G Thr115Ser
M0113034 MGFENGMI_00523 420123 5 Skin 0.06 protein_coding synonymous_variant LOW 375T>C Asp125Asp
M0113035 MGFENGMI_00523 420138 5 Skin 0.06 protein_coding synonymous_variant LOW 390T>G Gly130Gly
M0113036 MGFENGMI_00523 420168 5 Skin 0.06 protein_coding synonymous_variant LOW 420A>G Pro140Pro
M0113037 MGFENGMI_00523 420192 5 Skin 0.06 protein_coding synonymous_variant LOW 444T>C Gly148Gly
M0113038 MGFENGMI_00523 420234 5 Skin 0.06 protein_coding synonymous_variant LOW 486C>T Phe162Phe
M0113039 MGFENGMI_00522 420629 7 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -989A>G None
M0113040 MGFENGMI_00522 420648 7 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1008A>T None
M0113041 MGFENGMI_00522 420652 7 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1012C>G None
M0113042 MGFENGMI_00522 420673 7 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1033T>G None
M0113043 MGFENGMI_00522 420712 7 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1072T>C None
M0113044 MGFENGMI_00522 420807 7 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1167C>G None
M0113045 MGFENGMI_00522 420815 7 Skin 0.09 protein_coding upstream_gene_variant MODIFIER -1175A>C None
M0113046 MGFENGMI_00524 421055 7 Skin 0.09 protein_coding synonymous_variant LOW 183C>T Gly61Gly
M0113047 MGFENGMI_00524 421238 8 Skin 0.10 protein_coding synonymous_variant LOW 366C>T Thr122Thr
M0113048 MGFENGMI_00524 421307 9 Skin 0.12 protein_coding synonymous_variant LOW 435T>G Thr145Thr
M0113049 MGFENGMI_00524 421543 7 Skin 0.09 protein_coding missense_variant MODERATE 671T>A Phe224Tyr
M0113050 MGFENGMI_00527 429444 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3984T>G None
M0113051 MGFENGMI_00527 429446 5 Skin 0.06 protein_coding upstream_gene_variant MODIFIER -3986C>A None
M0113052 MGFENGMI_00527 429487 6 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4027T>G None
M0113053 MGFENGMI_00527 429610 6 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4150T>C None
M0113054 MGFENGMI_00527 429617 6 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4157T>C None
M0113055 MGFENGMI_00527 429654 6 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4194G>A None
M0113056 MGFENGMI_00527 429743 6 Skin 0.08 protein_coding upstream_gene_variant MODIFIER -4283G>A None
M0113057 MGFENGMI_00532 429861 7 Skin 0.09 protein_coding synonymous_variant LOW 81A>G Thr27Thr
M0113058 MGFENGMI_00532 429867 6 Skin 0.08 protein_coding synonymous_variant LOW 87G>A Ser29Ser
M0113059 MGFENGMI_00532 429963 7 Skin 0.09 protein_coding synonymous_variant LOW 183A>G Gln61Gln
M0113060 MGFENGMI_00532 430083 6 Skin 0.08 protein_coding synonymous_variant LOW 303A>G Gln101Gln
M0113061 MGFENGMI_00532 430247 6 Skin 0.08 protein_coding missense_variant MODERATE 467A>C Glu156Ala
M0113062 MGFENGMI_00532 430268 6 Skin 0.08 protein_coding missense_variant MODERATE 488A>C Glu163Ala
M0113063 MGFENGMI_00532 430297 6 Skin 0.08 protein_coding synonymous_variant LOW 517C>T Leu173Leu
M0113064 MGFENGMI_00532 430302 6 Skin 0.08 protein_coding missense_variant MODERATE 522A>C Glu174Asp
M0113065 MGFENGMI_00532 430776 7 Skin 0.09 protein_coding synonymous_variant LOW 996C>T Arg332Arg
M0113066 MGFENGMI_00533 431136 8 Skin 0.10 protein_coding synonymous_variant LOW 165A>T Leu55Leu
M0113067 MGFENGMI_00533 431295 9 Skin 0.12 protein_coding synonymous_variant LOW 324C>T Asn108Asn
M0113068 MGFENGMI_00533 431349 8 Skin 0.10 protein_coding synonymous_variant LOW 378T>C Arg126Arg
M0113069 MGFENGMI_00533 431436 8 Skin 0.10 protein_coding synonymous_variant LOW 465A>G Gln155Gln
M0113070 MGFENGMI_00533 431571 9 Skin 0.12 protein_coding synonymous_variant LOW 600C>T His200His
M0113071 MGFENGMI_00533 431574 8 Skin 0.10 protein_coding synonymous_variant LOW 603C>T Ser201Ser
M0113072 MGFENGMI_00533 431907 9 Skin 0.12 protein_coding missense_variant MODERATE 936T>A Asn312Lys
M0113073 MGFENGMI_00530 431960 8 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4235C>T None
M0113074 MGFENGMI_00530 432003 8 Skin 0.10 protein_coding upstream_gene_variant MODIFIER -4278T>A None
M0113075 MGFENGMI_00534 432258 8 Skin 0.10 protein_coding synonymous_variant LOW 165G>T Ser55Ser
M0113076 MGFENGMI_00534 432309 9 Skin 0.12 protein_coding synonymous_variant LOW 216G>T Val72Val
M0113077 MGFENGMI_00530 432505 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4780A>G None
M0113078 MGFENGMI_00530 432535 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4810T>C None
M0113079 MGFENGMI_00530 432538 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4813G>T None
M0113080 MGFENGMI_00530 432541 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4816T>A None
M0113081 MGFENGMI_00530 432586 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4861A>T None
M0113082 MGFENGMI_00530 432588 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4863G>A None
M0113083 MGFENGMI_00530 432596 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -4871A>T None
M0113084 MGFENGMI_00535 433136 25 Skin 0.32 protein_coding synonymous_variant LOW 33C>T Ala11Ala
M0113085 MGFENGMI_00535 433210 26 Skin 0.34 protein_coding upstream_gene_variant MODIFIER -42T>G None
M0113086 MGFENGMI_00536 433810 34 Skin 0.44 protein_coding missense_variant MODERATE 470T>C Leu157Pro
M0113087 MGFENGMI_00536 434974 27 Skin 0.35 protein_coding missense_variant MODERATE 1634C>T Ala545Val
M0113088 MGFENGMI_00537 436279 9 Skin 0.12 protein_coding missense_variant MODERATE 1654A>G Asn552Asp
M0113089 MGFENGMI_00537 436295 6 Skin 0.08 protein_coding synonymous_variant LOW 1638C>T His546His
M0113090 MGFENGMI_00537 436308 9 Skin 0.12 protein_coding missense_variant MODERATE 1625A>G Asp542Gly
M0113091 MGFENGMI_00537 436311 9 Skin 0.12 protein_coding missense_variant MODERATE 1622T>A Leu541Gln
M0113092 MGFENGMI_00537 436321 6 Skin 0.08 protein_coding synonymous_variant LOW 1612C>T Leu538Leu
M0113093 MGFENGMI_00537 436343 8 Skin 0.10 protein_coding synonymous_variant LOW 1590G>A Arg530Arg
M0113094 MGFENGMI_00537 436352 6 Skin 0.08 protein_coding synonymous_variant LOW 1581G>C Pro527Pro
M0113095 MGFENGMI_00537 436355 6 Skin 0.08 protein_coding synonymous_variant LOW 1578G>A Ala526Ala
M0113096 MGFENGMI_00537 436361 6 Skin 0.08 protein_coding synonymous_variant LOW 1572C>T Ile524Ile
M0113097 MGFENGMI_00537 436364 6 Skin 0.08 protein_coding synonymous_variant LOW 1569G>A Glu523Glu
M0113098 MGFENGMI_00537 436367 8 Skin 0.10 protein_coding synonymous_variant LOW 1566T>C Asp522Asp
M0113099 MGFENGMI_00537 436373 8 Skin 0.10 protein_coding synonymous_variant LOW 1560A>G Leu520Leu
M0113100 MGFENGMI_00537 436379 6 Skin 0.08 protein_coding synonymous_variant LOW 1554C>T Arg518Arg
M0113101 MGFENGMI_00537 436454 5 Skin 0.06 protein_coding synonymous_variant LOW 1479G>C Gly493Gly
M0113102 MGFENGMI_00537 436457 7 Skin 0.09 protein_coding synonymous_variant LOW 1476T>C Ala492Ala
M0113103 MGFENGMI_00537 436507 6 Skin 0.08 protein_coding synonymous_variant LOW 1426T>C Leu476Leu
M0113104 MGFENGMI_00537 436523 4 Skin 0.05 protein_coding synonymous_variant LOW 1410C>T Phe470Phe
M0113105 MGFENGMI_00537 436538 6 Skin 0.08 protein_coding synonymous_variant LOW 1395C>G Ala465Ala
M0113106 MGFENGMI_00537 436562 4 Skin 0.05 protein_coding synonymous_variant LOW 1371C>T Asp457Asp
M0113107 MGFENGMI_00537 436580 6 Skin 0.08 protein_coding synonymous_variant LOW 1353T>C Asp451Asp
M0113108 MGFENGMI_00537 436589 6 Skin 0.08 protein_coding synonymous_variant LOW 1344C>T His448His
M0113109 MGFENGMI_00537 436601 6 Skin 0.08 protein_coding synonymous_variant LOW 1332C>G Ser444Ser
M0113110 MGFENGMI_00537 436607 6 Skin 0.08 protein_coding synonymous_variant LOW 1326G>A Glu442Glu
M0113111 MGFENGMI_00537 436613 4 Skin 0.05 protein_coding synonymous_variant LOW 1320C>T Leu440Leu
M0113112 MGFENGMI_00537 436616 4 Skin 0.05 protein_coding synonymous_variant LOW 1317G>A Val439Val
M0113113 MGFENGMI_00537 436628 6 Skin 0.08 protein_coding synonymous_variant LOW 1305T>C Gly435Gly
M0113114 MGFENGMI_00537 436646 4 Skin 0.05 protein_coding synonymous_variant LOW 1287G>A Leu429Leu
M0113115 MGFENGMI_00537 436660 6 Skin 0.08 protein_coding synonymous_variant LOW 1273C>T Leu425Leu
M0113116 MGFENGMI_00537 436666 4 Skin 0.05 protein_coding synonymous_variant LOW 1267C>T Leu423Leu
M0113117 MGFENGMI_00537 436670 6 Skin 0.08 protein_coding synonymous_variant LOW 1263G>A Gln421Gln
M0113118 MGFENGMI_00547 443845 5 Skin 0.06 protein_coding missense_variant MODERATE 954G>C Gln318His
M0113119 MGFENGMI_00541 445321 3 Skin 0.04 protein_coding upstream_gene_variant MODIFIER -4568T>G None
M0113120 MGFENGMI_00537 436730 3 Skin 0.04 protein_coding synonymous_variant LOW 1203G>A Leu401Leu
M0113121 MGFENGMI_00537 436734 3 Skin 0.04 protein_coding missense_variant MODERATE 1199G>A Gly400Glu
M0113122 MGFENGMI_00537 436736 3 Skin 0.04 protein_coding synonymous_variant LOW 1197T>C Arg399Arg
M0113123 MGFENGMI_00537 436754 4 Skin 0.05 protein_coding synonymous_variant LOW 1179A>G Ala393Ala
M0113124 MGFENGMI_00537 436766 3 Skin 0.04 protein_coding synonymous_variant LOW 1167T>A Gly389Gly
M0113125 MGFENGMI_00537 436769 3 Skin 0.04 protein_coding synonymous_variant LOW 1164C>T Ala388Ala
M0113126 MGFENGMI_00537 436781 3 Skin 0.04 protein_coding synonymous_variant LOW 1152G>A Ala384Ala
M0113127 MGFENGMI_00537 436805 3 Skin 0.04 protein_coding synonymous_variant LOW 1128A>G Leu376Leu
M0113128 MGFENGMI_00537 436811 3 Skin 0.04 protein_coding synonymous_variant LOW 1122G>C Ser374Ser
M0113129 MGFENGMI_00537 436817 3 Skin 0.04 protein_coding synonymous_variant LOW 1116C>T Arg372Arg
M0113130 MGFENGMI_00537 436825 4 Skin 0.05 protein_coding missense_variant MODERATE 1108A>G Met370Val
M0113131 MGFENGMI_00526 422889 12 Skin 0.16 protein_coding stop_gained HIGH 280G>T Gly94*
M0113132 MGFENGMI_00526 422939 12 Skin 0.16 protein_coding synonymous_variant LOW 330C>T Cys110Cys
M0113133 MGFENGMI_00526 423140 13 Skin 0.17 protein_coding synonymous_variant LOW 531A>C Thr177Thr
M0113134 MGFENGMI_00526 423409 13 Skin 0.17 protein_coding missense_variant MODERATE 800A>C Asp267Ala
M0113135 MGFENGMI_00524 421862 6 Skin 0.08 protein_coding synonymous_variant LOW 990A>C Ala330Ala
M0113136 MGFENGMI_00522 421988 9 Skin 0.12 protein_coding upstream_gene_variant MODIFIER -2348T>G None
M0113137 MGFENGMI_00522 424431 13 Skin 0.17 protein_coding upstream_gene_variant MODIFIER -4791G>A None
M0113138 MGFENGMI_00527 424780 11 Skin 0.14 protein_coding synonymous_variant LOW 681C>T Pro227Pro
M0113139 MGFENGMI_00527 424861 13 Skin 0.17 protein_coding synonymous_variant LOW 600A>G Gly200Gly
M0113140 MGFENGMI_00527 425290 12 Skin 0.16 protein_coding synonymous_variant LOW 171C>A Ile57Ile
M0113141 MGFENGMI_00528 425712 10 Skin 0.13 protein_coding synonymous_variant LOW 189A>G Gln63Gln
M0113142 MGFENGMI_00528 425811 10 Skin 0.13 protein_coding synonymous_variant LOW 288T>C Ala96Ala
M0113143 MGFENGMI_00531 428180 8 Skin 0.10 protein_coding synonymous_variant LOW 318T>C Asn106Asn
M0113144 MGFENGMI_00531 428375 9 Skin 0.12 protein_coding synonymous_variant LOW 513A>C Gly171Gly
M0113145 MGFENGMI_00537 435524 3 Skin 0.04 protein_coding synonymous_variant LOW 2409C>T His803His
M0113146 MGFENGMI_00537 435530 3 Skin 0.04 protein_coding synonymous_variant LOW 2403G>A Gly801Gly
M0113147 MGFENGMI_00537 435809 3 Skin 0.04 protein_coding synonymous_variant LOW 2124G>A Ala708Ala
M0113148 MGFENGMI_00537 435821 3 Skin 0.04 protein_coding synonymous_variant LOW 2112C>G Thr704Thr
M0113149 MGFENGMI_00537 435824 3 Skin 0.04 protein_coding synonymous_variant LOW 2109G>T Pro703Pro
M0113150 MGFENGMI_00537 435869 4 Skin 0.05 protein_coding synonymous_variant LOW 2064T>G Val688Val
M0113151 MGFENGMI_00537 435911 4 Skin 0.05 protein_coding synonymous_variant LOW 2022C>T Val674Val
M0113152 MGFENGMI_00537 435935 3 Skin 0.04 protein_coding synonymous_variant LOW 1998T>C Asp666Asp
M0113153 MGFENGMI_00537 435953 3 Skin 0.04 protein_coding synonymous_variant LOW 1980T>G Ala660Ala
M0113154 MGFENGMI_00537 435983 3 Skin 0.04 protein_coding synonymous_variant LOW 1950G>A Val650Val
M0113155 MGFENGMI_00537 435989 3 Skin 0.04 protein_coding synonymous_variant LOW 1944C>T Asp648Asp
M0113156 MGFENGMI_00537 435998 3 Skin 0.04 protein_coding synonymous_variant LOW 1935T>C Gly645Gly
M0113157 MGFENGMI_00537 436001 3 Skin 0.04 protein_coding synonymous_variant LOW 1932G>C Thr644Thr
M0113158 MGFENGMI_00537 436037 3 Skin 0.04 protein_coding synonymous_variant LOW 1896C>T Ile632Ile
M0113159 MGFENGMI_00537 436043 3 Skin 0.04 protein_coding synonymous_variant LOW 1890G>A Lys630Lys
M0113160 MGFENGMI_00537 436097 3 Skin 0.04 protein_coding synonymous_variant LOW 1836C>T Gly612Gly
M0113161 MGFENGMI_00537 436100 3 Skin 0.04 protein_coding synonymous_variant LOW 1833C>T Gly611Gly
M0113162 MGFENGMI_00537 436114 3 Skin 0.04 protein_coding missense_variant MODERATE 1819G>A Val607Ile
M0113163 MGFENGMI_00537 436118 3 Skin 0.04 protein_coding synonymous_variant LOW 1815A>C Ala605Ala
M0113164 MGFENGMI_00537 436130 3 Skin 0.04 protein_coding synonymous_variant LOW 1803C>T Ser601Ser
M0113165 MGFENGMI_00537 436140 3 Skin 0.04 protein_coding missense_variant MODERATE 1793G>A Ser598Asn
M0113166 MGFENGMI_00537 436142 3 Skin 0.04 protein_coding missense_variant MODERATE 1791A>T Glu597Asp
M0113167 MGFENGMI_00537 436148 3 Skin 0.04 protein_coding synonymous_variant LOW 1785C>G Ala595Ala
M0113168 MGFENGMI_00537 436178 3 Skin 0.04 protein_coding synonymous_variant LOW 1755G>A Leu585Leu
M0113169 MGFENGMI_00537 436190 3 Skin 0.04 protein_coding synonymous_variant LOW 1743A>G Glu581Glu
M0113170 MGFENGMI_00537 436232 3 Skin 0.04 protein_coding synonymous_variant LOW 1701T>C Ser567Ser
M0113171 MGFENGMI_00537 436238 3 Skin 0.04 protein_coding synonymous_variant LOW 1695C>T Gly565Gly
M0113172 MGFENGMI_00537 436241 3 Skin 0.04 protein_coding synonymous_variant LOW 1692C>G Thr564Thr
M0113173 MGFENGMI_00537 436244 3 Skin 0.04 protein_coding synonymous_variant LOW 1689T>C Val563Val
M0113174 MGFENGMI_00537 436253 3 Skin 0.04 protein_coding synonymous_variant LOW 1680G>A Leu560Leu
M0113175 MGFENGMI_00537 436274 3 Skin 0.04 protein_coding synonymous_variant LOW 1659G>A Ala553Ala
M0113176 MGFENGMI_00537 436304 3 Skin 0.04 protein_coding synonymous_variant LOW 1629C>T Ile543Ile
M0113177 MGFENGMI_00620 518241 3 Skin 0.04 protein_coding missense_variant MODERATE 254A>C Asp85Ala
M0113178 MGFENGMI_00544 441563 4 Skin 0.05 protein_coding missense_variant MODERATE 626A>G Asn209Ser
M0113179 MGFENGMI_00544 441884 4 Skin 0.05 protein_coding missense_variant MODERATE 305G>C Ser102Thr
M0113180 MGFENGMI_00527 424884 3 Skin 0.04 protein_coding synonymous_variant LOW 577C>T Leu193Leu
M0113181 MGFENGMI_00527 424915 3 Skin 0.04 protein_coding synonymous_variant LOW 546T>C Thr182Thr






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group
MGFENGMI_00012 Mercury (Hg) 100 7.1e-78 1 144 1.0000 1.0000 experiment
MGFENGMI_00013 Mercury (Hg) 100 4.4e-62 1 116 1.0000 1.0000 experiment
MGFENGMI_00014 Mercury (Hg) 100 2.7e-43 1 91 1.0000 1.0000 experiment
MGFENGMI_00015 Mercury (Hg) 98.8 5.99999999978328e-314 1 561 1.0000 1.0000 experiment
MGFENGMI_00016 Mercury (Hg) 100 1.9e-63 1 121 1.0000 1.0000 experiment
MGFENGMI_00017 Mercury (Hg) 100 1.3e-41 1 78 1.0000 1.0000 experiment
MGFENGMI_00043 Cobalt (Co), Nickel (Ni) 71.9 4.3e-172 14 467 0.9560 0.9520 experiment
MGFENGMI_00043 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 71.9 4.3e-172 14 467 0.9560 0.9520 experiment
MGFENGMI_00044 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 76.8 0 1 1032 0.9981 0.9990 experiment
MGFENGMI_00445 Tellurium (Te) 71.1 8.6e-138 1 340 0.9942 0.9884 experiment
MGFENGMI_00446 Tellurium (Te) 70.3 3.6e-77 1 192 1.0000 1.0000 experiment
MGFENGMI_00447 Tellurium (Te) 70.2 1.6e-77 1 191 0.9948 1.0000 experiment
MGFENGMI_00591 Mercury (Hg) 100 7.1e-78 1 144 1.0000 1.0000 experiment
MGFENGMI_00592 Mercury (Hg) 100 4.4e-62 1 116 1.0000 1.0000 experiment
MGFENGMI_00593 Mercury (Hg) 100 2.7e-43 1 91 1.0000 1.0000 experiment
MGFENGMI_00594 Mercury (Hg) 98.8 5.99999999978328e-314 1 561 1.0000 1.0000 experiment
MGFENGMI_00595 Mercury (Hg) 100 1.9e-63 1 121 1.0000 1.0000 experiment
MGFENGMI_00596 Mercury (Hg) 100 1.3e-41 1 78 1.0000 1.0000 experiment
MGFENGMI_00605 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)] 100 1.1e-60 1 115 1.0000 1.0000 experiment
MGFENGMI_00610 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)] 100 1.1e-60 1 115 1.0000 1.0000 experiment
MJPKKKDE_00012 Mercury (Hg) 100 7.1e-78 1 144 1.0000 1.0000 experiment
MJPKKKDE_00013 Mercury (Hg) 100 4.4e-62 1 116 1.0000 1.0000 experiment
MJPKKKDE_00014 Mercury (Hg) 100 2.7e-43 1 91 1.0000 1.0000 experiment
MJPKKKDE_00015 Mercury (Hg) 98.8 5.99999999978328e-314 1 561 1.0000 1.0000 experiment
MJPKKKDE_00016 Mercury (Hg) 100 1.9e-63 1 121 1.0000 1.0000 experiment
MJPKKKDE_00017 Mercury (Hg) 100 1.3e-41 1 78 1.0000 1.0000 experiment
MJPKKKDE_00043 Cobalt (Co), Nickel (Ni) 71.9 4.3e-172 14 467 0.9560 0.9520 experiment
MJPKKKDE_00043 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 71.9 4.3e-172 14 467 0.9560 0.9520 experiment
MJPKKKDE_00044 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 76.8 0 1 1032 0.9981 0.9990 experiment
MJPKKKDE_00445 Tellurium (Te) 71.1 8.6e-138 1 340 0.9942 0.9884 experiment
MJPKKKDE_00446 Tellurium (Te) 70.3 3.6e-77 1 192 1.0000 1.0000 experiment
MJPKKKDE_00447 Tellurium (Te) 70.2 1.6e-77 1 191 0.9948 1.0000 experiment
MJPKKKDE_00591 Mercury (Hg) 100 7.1e-78 1 144 1.0000 1.0000 experiment
MJPKKKDE_00592 Mercury (Hg) 100 4.4e-62 1 116 1.0000 1.0000 experiment
MJPKKKDE_00593 Mercury (Hg) 100 2.7e-43 1 91 1.0000 1.0000 experiment
MJPKKKDE_00594 Mercury (Hg) 98.8 5.99999999978328e-314 1 561 1.0000 1.0000 experiment
MJPKKKDE_00595 Mercury (Hg) 100 1.9e-63 1 121 1.0000 1.0000 experiment
MJPKKKDE_00596 Mercury (Hg) 100 1.3e-41 1 78 1.0000 1.0000 experiment
MJPKKKDE_00605 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)] 100 1.1e-60 1 115 1.0000 1.0000 experiment
MJPKKKDE_00610 Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)] 100 1.1e-60 1 115 1.0000 1.0000 experiment
MGFENGMI_00012 Mercury (Hg) 100 1.6e-75 1 144 1.0000 1.0000 prediction
MGFENGMI_00013 Mercury (Hg) 100 1e-59 1 116 1.0000 0.8657 prediction
MGFENGMI_00014 Mercury (Hg) 98.9 1.1e-40 1 91 1.0000 1.0000 prediction
MGFENGMI_00015 Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury] 100 0 1 561 1.0000 1.0000 prediction
MGFENGMI_00016 Mercury (Hg) 100 4.3e-61 1 121 1.0000 1.0000 prediction
MGFENGMI_00017 Mercury (Hg) 100 3e-39 1 78 1.0000 1.0000 prediction
MGFENGMI_00018 Mercury (Hg) 99.7 1.1e-196 1 329 1.0000 0.8044 prediction
MGFENGMI_00043 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 100 2e-255 1 477 1.0000 1.0000 prediction
MGFENGMI_00044 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 100 0 1 1044 1.0000 1.0000 prediction
MGFENGMI_00045 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 100 3.9e-209 1 387 1.0000 1.0000 prediction
MGFENGMI_00445 Tellurium (Te) 71.9 1.5e-138 1 340 0.9942 0.9884 prediction
MGFENGMI_00446 Tellurium (Te) 72.4 1e-77 1 192 1.0000 1.0000 prediction
MGFENGMI_00447 Tellurium (Te) 70.7 1.7e-75 1 191 0.9948 1.0000 prediction
MGFENGMI_00591 Mercury (Hg) 100 1.6e-75 1 144 1.0000 1.0000 prediction
MGFENGMI_00592 Mercury (Hg) 100 1e-59 1 116 1.0000 0.8657 prediction
MGFENGMI_00593 Mercury (Hg) 98.9 1.1e-40 1 91 1.0000 1.0000 prediction
MGFENGMI_00594 Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury] 100 0 1 561 1.0000 1.0000 prediction
MGFENGMI_00595 Mercury (Hg) 100 4.3e-61 1 121 1.0000 1.0000 prediction
MGFENGMI_00596 Mercury (Hg) 100 3e-39 1 78 1.0000 1.0000 prediction
MGFENGMI_00597 Mercury (Hg) 99.7 1.1e-196 1 329 1.0000 0.8044 prediction
MJPKKKDE_00012 Mercury (Hg) 100 1.6e-75 1 144 1.0000 1.0000 prediction
MJPKKKDE_00013 Mercury (Hg) 100 1e-59 1 116 1.0000 0.8657 prediction
MJPKKKDE_00014 Mercury (Hg) 98.9 1.1e-40 1 91 1.0000 1.0000 prediction
MJPKKKDE_00015 Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury] 100 0 1 561 1.0000 1.0000 prediction
MJPKKKDE_00016 Mercury (Hg) 100 4.3e-61 1 121 1.0000 1.0000 prediction
MJPKKKDE_00017 Mercury (Hg) 100 3e-39 1 78 1.0000 1.0000 prediction
MJPKKKDE_00018 Mercury (Hg) 99.7 1.1e-196 1 329 1.0000 0.8044 prediction
MJPKKKDE_00043 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 100 2e-255 1 477 1.0000 1.0000 prediction
MJPKKKDE_00044 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 100 0 1 1044 1.0000 1.0000 prediction
MJPKKKDE_00045 Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons] 100 3.9e-209 1 387 1.0000 1.0000 prediction
MJPKKKDE_00445 Tellurium (Te) 71.9 1.5e-138 1 340 0.9942 0.9884 prediction
MJPKKKDE_00446 Tellurium (Te) 72.4 1e-77 1 192 1.0000 1.0000 prediction
MJPKKKDE_00447 Tellurium (Te) 70.7 1.7e-75 1 191 0.9948 1.0000 prediction
MJPKKKDE_00591 Mercury (Hg) 100 1.6e-75 1 144 1.0000 1.0000 prediction
MJPKKKDE_00592 Mercury (Hg) 100 1e-59 1 116 1.0000 0.8657 prediction
MJPKKKDE_00593 Mercury (Hg) 98.9 1.1e-40 1 91 1.0000 1.0000 prediction
MJPKKKDE_00594 Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury] 100 0 1 561 1.0000 1.0000 prediction
MJPKKKDE_00595 Mercury (Hg) 100 4.3e-61 1 121 1.0000 1.0000 prediction
MJPKKKDE_00596 Mercury (Hg) 100 3e-39 1 78 1.0000 1.0000 prediction
MJPKKKDE_00597 Mercury (Hg) 99.7 1.1e-196 1 329 1.0000 0.8044 prediction






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism
MGFENGMI_00003 ARO:3002660 99.6 1.07e-205 1 278 1.0000 1.0000 aminoglycoside antibiotic APH(6) antibiotic inactivation
MGFENGMI_00004 ARO:3002639 99.6 5.98e-202 1 267 1.0000 1.0000 aminoglycoside antibiotic APH(3'') antibiotic inactivation
MGFENGMI_00043 ARO:3000802 72.4 8.72e-210 19 465 0.9413 0.9374 macrolide antibiotic resistance-nodulation-cell division (RND) antibiotic efflux pump antibiotic efflux
MGFENGMI_00044 ARO:3000801 76.7 0 1 1032 0.9981 0.9990 macrolide antibiotic resistance-nodulation-cell division (RND) antibiotic efflux pump antibiotic efflux
MGFENGMI_00048 ARO:3002601 99.6 1.33e-186 1 259 1.0000 0.9848 aminoglycoside antibiotic ANT(3'') antibiotic inactivation
MGFENGMI_00049 ARO:3001399 100 4.27e-199 16 291 0.9485 1.0000 cephalosporin OXA beta-lactamase antibiotic inactivation
MGFENGMI_00050 ARO:3002577 99.5 8.36e-136 1 184 1.0000 1.0000 aminoglycoside antibiotic AAC(6') antibiotic inactivation
MGFENGMI_00051 ARO:3007489 100 2.48e-55 1 78 1.0000 1.0000 diaminopyrimidine antibiotic trimethoprim resistant dihydrofolate reductase dfr antibiotic target replacement
MGFENGMI_00052 ARO:3000848 99.2 6.92e-184 1 251 1.0000 1.0000 carbapenem DIM beta-lactamase antibiotic inactivation
MGFENGMI_00601 ARO:3002594 100 2.6e-139 1 184 1.0000 1.0000 aminoglycoside antibiotic AAC(6') antibiotic inactivation
MGFENGMI_00603 ARO:3004660 99.5 2.09e-160 1 210 1.0000 1.0000 phenicol antibiotic chloramphenicol acetyltransferase (CAT) antibiotic inactivation
MGFENGMI_00605 ARO:3005010 100 2.01e-78 1 115 1.0000 1.0000 disinfecting agents and antiseptics major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
MGFENGMI_00607 ARO:3005043 100 1.31e-217 1 317 0.8980 0.7847 phenicol antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
MGFENGMI_00609 ARO:3000410 100 2.94e-199 1 279 1.0000 1.0000 sulfonamide antibiotic sulfonamide resistant sul antibiotic target replacement
MGFENGMI_00610 ARO:3005010 100 2.01e-78 1 115 1.0000 1.0000 disinfecting agents and antiseptics major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
MGFENGMI_00612 ARO:3002854 98.7 1.63e-113 1 157 1.0000 1.0000 diaminopyrimidine antibiotic trimethoprim resistant dihydrofolate reductase dfr antibiotic target replacement
MGFENGMI_00614 ARO:3004660 99.5 2.09e-160 1 210 1.0000 1.0000 phenicol antibiotic chloramphenicol acetyltransferase (CAT) antibiotic inactivation
MGFENGMI_00616 ARO:3002594 100 2.6e-139 1 184 1.0000 1.0000 aminoglycoside antibiotic AAC(6') antibiotic inactivation
MGFENGMI_00617 ARO:3002803 100 9.75e-87 1 218 1.0000 1.0000 fluoroquinolone antibiotic quinolone resistance protein (qnr) antibiotic target protection
MJPKKKDE_00003 ARO:3002660 99.6 1.07e-205 1 278 1.0000 1.0000 aminoglycoside antibiotic APH(6) antibiotic inactivation
MJPKKKDE_00004 ARO:3002639 99.6 5.98e-202 1 267 1.0000 1.0000 aminoglycoside antibiotic APH(3'') antibiotic inactivation
MJPKKKDE_00043 ARO:3000802 72.4 8.72e-210 19 465 0.9413 0.9374 macrolide antibiotic resistance-nodulation-cell division (RND) antibiotic efflux pump antibiotic efflux
MJPKKKDE_00044 ARO:3000801 76.7 0 1 1032 0.9981 0.9990 macrolide antibiotic resistance-nodulation-cell division (RND) antibiotic efflux pump antibiotic efflux
MJPKKKDE_00048 ARO:3002601 99.6 1.33e-186 1 259 1.0000 0.9848 aminoglycoside antibiotic ANT(3'') antibiotic inactivation
MJPKKKDE_00049 ARO:3001399 100 4.27e-199 16 291 0.9485 1.0000 cephalosporin OXA beta-lactamase antibiotic inactivation
MJPKKKDE_00050 ARO:3002577 99.5 8.36e-136 1 184 1.0000 1.0000 aminoglycoside antibiotic AAC(6') antibiotic inactivation
MJPKKKDE_00051 ARO:3007489 100 2.48e-55 1 78 1.0000 1.0000 diaminopyrimidine antibiotic trimethoprim resistant dihydrofolate reductase dfr antibiotic target replacement
MJPKKKDE_00052 ARO:3000848 99.2 6.92e-184 1 251 1.0000 1.0000 carbapenem DIM beta-lactamase antibiotic inactivation
MJPKKKDE_00601 ARO:3002594 100 2.6e-139 1 184 1.0000 1.0000 aminoglycoside antibiotic AAC(6') antibiotic inactivation
MJPKKKDE_00603 ARO:3004660 99.5 2.09e-160 1 210 1.0000 1.0000 phenicol antibiotic chloramphenicol acetyltransferase (CAT) antibiotic inactivation
MJPKKKDE_00605 ARO:3005010 100 2.01e-78 1 115 1.0000 1.0000 disinfecting agents and antiseptics major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
MJPKKKDE_00607 ARO:3005043 100 1.31e-217 1 317 0.8980 0.7847 phenicol antibiotic major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
MJPKKKDE_00609 ARO:3000410 100 2.94e-199 1 279 1.0000 1.0000 sulfonamide antibiotic sulfonamide resistant sul antibiotic target replacement
MJPKKKDE_00610 ARO:3005010 100 2.01e-78 1 115 1.0000 1.0000 disinfecting agents and antiseptics major facilitator superfamily (MFS) antibiotic efflux pump antibiotic efflux
MJPKKKDE_00612 ARO:3002854 98.7 1.63e-113 1 157 1.0000 1.0000 diaminopyrimidine antibiotic trimethoprim resistant dihydrofolate reductase dfr antibiotic target replacement
MJPKKKDE_00614 ARO:3004660 99.5 2.09e-160 1 210 1.0000 1.0000 phenicol antibiotic chloramphenicol acetyltransferase (CAT) antibiotic inactivation
MJPKKKDE_00616 ARO:3002594 100 2.6e-139 1 184 1.0000 1.0000 aminoglycoside antibiotic AAC(6') antibiotic inactivation
MJPKKKDE_00617 ARO:3002803 100 9.75e-87 1 218 1.0000 1.0000 fluoroquinolone antibiotic quinolone resistance protein (qnr) antibiotic target protection






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
MGFENGMI_00053 PHI:9804 int 100 4e-14 1 37 0.1098 1.0000 rodents gastroenteritis integrase reduced virulence
MGFENGMI_00335 PHI:10380 RecA 73.8 3.7e-140 1 328 0.9507 0.9398 nematodes nosocomial infection DNA strand exchange and recombination protein reduced virulence
MGFENGMI_00600 PHI:9804 int 100 3.8e-14 1 37 0.1160 1.0000 rodents gastroenteritis integrase reduced virulence
MGFENGMI_00618 PHI:9804 int 100 4e-14 1 37 0.1098 1.0000 rodents gastroenteritis integrase reduced virulence
MJPKKKDE_00053 PHI:9804 int 100 4e-14 1 37 0.1098 1.0000 rodents gastroenteritis integrase reduced virulence
MJPKKKDE_00335 PHI:10380 RecA 73.8 3.7e-140 1 328 0.9507 0.9398 nematodes nosocomial infection DNA strand exchange and recombination protein reduced virulence
MJPKKKDE_00600 PHI:9804 int 100 3.8e-14 1 37 0.1160 1.0000 rodents gastroenteritis integrase reduced virulence
MJPKKKDE_00618 PHI:9804 int 100 4e-14 1 37 0.1098 1.0000 rodents gastroenteritis integrase reduced virulence






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
MGFENGMI_00095 QNI17155.1|GH23 100 4.51e-168 1 234 1 1
MJPKKKDE_00095 QNI17155.1|GH23 100 4.51e-168 1 234 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term
MGFENGMI_00013 1.A.72.3.1 100 1.7e-60 1 116 1.0000 1.2747 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MGFENGMI_00014 1.A.72.3.1 100 1e-41 1 91 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MGFENGMI_00017 1.A.72.5.1 76 3e-29 1 75 0.9615 0.9615 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MGFENGMI_00043 2.A.6.2.15 71.9 1.6e-170 14 467 0.9518 1.1692 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
MGFENGMI_00044 2.A.6.2.15 76.8 0 1 1032 0.9885 2.6462 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
MGFENGMI_00045 2.A.6.2.15 85.9 1.7e-178 1 387 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
MGFENGMI_00445 2.A.109.1.1 71.6 5.3e-139 1 340 0.9884 0.9884 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.109 The Tellurium Ion Resistance (TerC) Family
MGFENGMI_00592 1.A.72.3.1 100 1.7e-60 1 116 1.0000 1.2747 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MGFENGMI_00593 1.A.72.3.1 100 1e-41 1 91 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MGFENGMI_00596 1.A.72.5.1 76 3e-29 1 75 0.9615 0.9615 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MGFENGMI_00607 2.A.1.2.110 91.2 8.3e-156 1 317 0.8980 0.7847 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)
MJPKKKDE_00013 1.A.72.3.1 100 1.7e-60 1 116 1.0000 1.2747 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MJPKKKDE_00014 1.A.72.3.1 100 1e-41 1 91 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MJPKKKDE_00017 1.A.72.5.1 76 3e-29 1 75 0.9615 0.9615 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MJPKKKDE_00043 2.A.6.2.15 71.9 1.6e-170 14 467 0.9518 1.1692 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
MJPKKKDE_00044 2.A.6.2.15 76.8 0 1 1032 0.9885 2.6462 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
MJPKKKDE_00045 2.A.6.2.15 85.9 1.7e-178 1 387 1.0000 1.0000 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.6 The Resistance-Nodulation-Cell Division (RND) Superfamily
MJPKKKDE_00445 2.A.109.1.1 71.6 5.3e-139 1 340 0.9884 0.9884 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.109 The Tellurium Ion Resistance (TerC) Family
MJPKKKDE_00592 1.A.72.3.1 100 1.7e-60 1 116 1.0000 1.2747 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MJPKKKDE_00593 1.A.72.3.1 100 1e-41 1 91 1.0000 1.0000 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MJPKKKDE_00596 1.A.72.5.1 76 3e-29 1 75 0.9615 0.9615 1 Channels/Pores 1.A α-Type Channels 1.A.72 The Mercuric Ion Pore (Mer) Superfamily
MJPKKKDE_00607 2.A.1.2.110 91.2 8.3e-156 1 317 0.8980 0.7847 2 Electrochemical Potential-driven Transporters 2.A Porters (uniporters, symporters, antiporters) 2.A.1 The Major Facilitator Superfamily (MFS)