| Cluster Information | Plasmid Cluster ID | C1214 |
| Reference Plasmid | NZ_CP135245.1 | |
| Reference Plasmid Size | 373462 | |
| Reference Plasmid GC Content | 0.51 | |
| Reference Plasmid Mobility Type | non-mobilizable |
| mutid | gname | pos | count | tissue | frequnt | biotype | consequence | impact | nucchange | aachange |
|---|---|---|---|---|---|---|---|---|---|---|
| M0199669 | IKHGILIC_00112 | 105188 | 4 | Gut | 0.44 | protein_coding | missense_variant | MODERATE | 454C>A | Pro152Thr |
| Gene Name | vf_gene_id | vf_name | identity | evalue | qstart | qend | query_coverage | subject_coverage | vf_category | gene_description | condition |
|---|---|---|---|---|---|---|---|---|---|---|---|
| IKHGILIC_00045 | VFG043209 | Flagella | 70.7 | 7.8e-160 | 1 | 440 | 0.9821 | 0.7899 | Motility | methyl-accepting chemotaxis protein CheD | experiment |
| IKHGILIC_00092 | VFG000879 | Type 1 fimbriae | 98.7 | 2.3e-168 | 1 | 300 | 1.0 | 1 | Adherence | FimH protein precursor | experiment |
| IKHGILIC_00093 | VFG000878 | Type 1 fimbriae | 98.8 | 2.8e-86 | 1 | 167 | 1.0 | 1 | Adherence | FimG protein precursor | experiment |
| IKHGILIC_00094 | VFG000877 | Type 1 fimbriae | 98.9 | 3.1e-96 | 1 | 176 | 1.0 | 1 | Adherence | FimF protein precursor | experiment |
| IKHGILIC_00095 | VFG000876 | Type 1 fimbriae | 99.8 | 0 | 1 | 878 | 1.0 | 1 | Adherence | Outer membrane usher protein fimD precursor | experiment |
| IKHGILIC_00096 | VFG000875 | Type 1 fimbriae | 99.2 | 3.3e-133 | 1 | 241 | 1.0 | 1 | Adherence | Chaperone protein fimC precursor | experiment |
| IKHGILIC_00097 | VFG000874 | Type 1 fimbriae | 97 | 3.9e-93 | 1 | 165 | 1.0 | 0.9218 | Adherence | Fimbrin-like protein fimI precursor | experiment |
| IKHGILIC_00098 | VFG000873 | Type 1 fimbriae | 92.9 | 2.8e-84 | 1 | 182 | 1.0 | 1 | Adherence | Type-1 fimbrial protein, A chain precursor | experiment |
| IKHGILIC_00099 | VFG000872 | Type 1 fimbriae | 100 | 4.9e-114 | 1 | 198 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimE | experiment |
| IKHGILIC_00100 | VFG000871 | Type 1 fimbriae | 99 | 5.6e-118 | 1 | 200 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimB | experiment |
| IKHGILIC_00250 | VFG001855 | Hsp60 | 75.2 | 3.8e-225 | 1 | 548 | 1.0 | 0.9982 | Adherence | Hsp60, 60K heat shock protein HtpB | experiment |
| IKHGILIC_00280 | VFG052340 | PmrAB | 91 | 3.8e-115 | 1 | 222 | 1.0 | 1 | Regulation | response regulator PmrA | experiment |
| IKHGILIC_00281 | VFG052339 | PmrAB | 85.9 | 2e-169 | 4 | 358 | 0.9699 | 0.9972 | Regulation | sensory kinase PmrB | experiment |
| IKHGILIC_00324 | VFG034873 | TTSS secreted effectors | 92.6 | 1.7e-228 | 1 | 430 | 1.0 | 1 | Effector delivery system | Type III secretion system effector EspX5 | experiment |
| IKHGILIC_00045 | VFG043209 | Flagella | 70.7 | 5.8e-159 | 1 | 440 | 0.9821 | 0.7899 | Motility | methyl-accepting chemotaxis protein CheD | prediction |
| IKHGILIC_00092 | VFG033355 | Type 1 fimbriae | 99.7 | 7.1e-169 | 1 | 300 | 1.0 | 1 | Adherence | FimH protein precursor | prediction |
| IKHGILIC_00093 | VFG012313 | Type 1 fimbriae | 98.8 | 2.1e-85 | 1 | 167 | 1.0 | 1 | Adherence | FimG protein precursor | prediction |
| IKHGILIC_00094 | VFG012306 | Type 1 fimbriae | 100 | 4.7e-96 | 1 | 176 | 1.0 | 1 | Adherence | FimF protein precursor | prediction |
| IKHGILIC_00095 | VFG000876 | Type 1 fimbriae | 99.8 | 0 | 1 | 878 | 1.0 | 1 | Adherence | Outer membrane usher protein fimD precursor | prediction |
| IKHGILIC_00096 | VFG033256 | Type 1 fimbriae | 100 | 2.3e-133 | 1 | 241 | 1.0 | 1 | Adherence | Chaperone protein fimC precursor | prediction |
| IKHGILIC_00097 | VFG012284 | Type 1 fimbriae | 98.2 | 2e-93 | 1 | 165 | 1.0 | 0.9218 | Adherence | Fimbrin-like protein fimI precursor | prediction |
| IKHGILIC_00098 | VFG033204 | Type 1 fimbriae | 98.9 | 9.8e-89 | 1 | 182 | 1.0 | 1 | Adherence | Type-1 fimbrial protein, A chain precursor | prediction |
| IKHGILIC_00099 | VFG000872 | Type 1 fimbriae | 100 | 3.6e-113 | 1 | 198 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimE | prediction |
| IKHGILIC_00100 | VFG012263 | Type 1 fimbriae | 99.5 | 3.2e-117 | 1 | 200 | 1.0 | 1 | Adherence | Type 1 fimbriae Regulatory protein fimB | prediction |
| IKHGILIC_00250 | VFG045692 | Hsp60 | 74.8 | 2e-225 | 1 | 548 | 1.0 | 0.9946 | Adherence | Hsp60, 60K heat shock protein HtpB | prediction |
| IKHGILIC_00280 | VFG052340 | PmrAB | 91 | 2.8e-114 | 1 | 222 | 1.0 | 1 | Regulation | response regulator PmrA | prediction |
| IKHGILIC_00281 | VFG052339 | PmrAB | 85.9 | 1.5e-168 | 4 | 358 | 0.9699 | 0.9972 | Regulation | sensory kinase PmrB | prediction |
| IKHGILIC_00324 | VFG034873 | TTSS secreted effectors | 92.6 | 1.3e-227 | 1 | 430 | 1.0 | 1 | Effector delivery system | Type III secretion system effector EspX5 | prediction |
| Gene Name | compound | identity | evalue | qstart | qend | query_coverage | subject_coverage | group |
|---|---|---|---|---|---|---|---|---|
| IKHGILIC_00072 | Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 97.8 | 1.6e-223 | 1 | 410 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00115 | Nickel (Ni), Cobalt (Co) | 99.7 | 4e-174 | 1 | 318 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00116 | Nickel (Ni), Cobalt (Co) | 99.6 | 2.4e-145 | 1 | 255 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00144 | Cobalt (Co), Magnesium (Mg) | 99.9 | 0 | 1 | 898 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00243 | Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate] | 100 | 2.4e-51 | 1 | 105 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00256 | Copper (Cu) | 100 | 1.8e-60 | 1 | 112 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00306 | Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 99.7 | 1.1e-185 | 1 | 343 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00323 | Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] | 99.8 | 2.7e-303 | 1 | 549 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00327 | Methyl Viologen [class: Paraquat] | 100 | 1.2e-86 | 1 | 154 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00328 | Zinc (Zn), Cyclohexane [class: Cycloalkane] | 100 | 5.5e-59 | 1 | 107 | 1.0000 | 1.0000 | experiment |
| IKHGILIC_00046 | Palmitic acid [class: Free Fatty Acids] | 100 | 2.1e-78 | 1 | 148 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00072 | Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 100 | 2.4e-225 | 1 | 410 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00115 | Nickel (Ni), Cobalt (Co) | 100 | 2.4e-172 | 1 | 318 | 1.0000 | 0.9695 | prediction |
| IKHGILIC_00116 | Nickel (Ni), Cobalt (Co) | 100 | 8.5e-144 | 1 | 255 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00144 | Cobalt (Co), Magnesium (Mg) | 100 | 0 | 1 | 898 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00255 | Copper (Cu) | 100 | 6.8e-202 | 1 | 389 | 0.8984 | 0.7811 | prediction |
| IKHGILIC_00256 | Copper (Cu) | 100 | 4.1e-58 | 1 | 112 | 1.0000 | 0.9825 | prediction |
| IKHGILIC_00280 | Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine] | 100 | 5e-124 | 1 | 222 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00281 | Iron (Fe) | 100 | 7e-200 | 1 | 366 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00306 | Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)] | 100 | 1.9e-183 | 1 | 343 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00323 | Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate] | 100 | 2.8e-301 | 1 | 549 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00327 | Methyl Viologen [class: Paraquat] | 100 | 2.7e-84 | 1 | 154 | 1.0000 | 1.0000 | prediction |
| IKHGILIC_00328 | Zinc (Zn), Cyclohexane [class: Cycloalkane] | 100 | 1.3e-56 | 1 | 107 | 1.0000 | 1.0000 | prediction |
| Gene Name | aro_accession | identity | evalue | qstart | qend | query_coverage | subject_coverage | drug_class | amr_gene_family | resistance_mechanism |
|---|---|---|---|---|---|---|---|---|---|---|
| IKHGILIC_00072 | ARO:3001214 | 98 | 8.76e-283 | 1 | 409 | 0.9976 | 0.9976 | fluoroquinolone antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IKHGILIC_00241 | ARO:3006874 | 98.4 | 2.98e-283 | 12 | 388 | 0.9716 | 1.0000 | cephalosporin | EC beta-lactamase | antibiotic inactivation |
| IKHGILIC_00279 | ARO:3003576 | 99.6 | 0 | 1 | 547 | 1.0000 | 1.0000 | peptide antibiotic | pmr phosphoethanolamine transferase | antibiotic target alteration |
| IKHGILIC_00306 | ARO:3003548 | 99.7 | 1.55e-233 | 1 | 343 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IKHGILIC_00307 | ARO:3003549 | 98.8 | 0 | 1 | 683 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IKHGILIC_00308 | ARO:3003550 | 98.2 | 0 | 1 | 488 | 1.0000 | 1.0000 | nucleoside antibiotic | major facilitator superfamily (MFS) antibiotic efflux pump | antibiotic efflux |
| IKHGILIC_00327 | ARO:3003381 | 100 | 7.23e-111 | 1 | 154 | 1.0000 | 1.0000 | fluoroquinolone antibiotic | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic target alteration |
| IKHGILIC_00328 | ARO:3003511 | 100 | 1.52e-76 | 1 | 107 | 1.0000 | 1.0000 | fluoroquinolone antibiotic | ATP-binding cassette (ABC) antibiotic efflux pump | antibiotic target alteration |
| Gene Name | phi_molconn_id | host gene_name | identity | evalue | qstart | qend | query_coverage | subject_coverage | host_descripton | disease_name | function | phenotype_of_mutant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IKHGILIC_00044 | PHI:6981 | tsr | 81.4 | 3.8e-38 | 1 | 113 | 1.0000 | 0.9982 | primates | salmonellosis | methyl-accepting chemotaxis protein | reduced virulence |
| IKHGILIC_00045 | PHI:6981 | tsr | 88.2 | 3.1e-208 | 1 | 440 | 0.9821 | 0.9982 | primates | salmonellosis | methyl-accepting chemotaxis protein | reduced virulence |
| IKHGILIC_00057 | PHI:7575 | yjiY | 96.4 | 0 | 1 | 716 | 1.0000 | 1.0000 | rodents | salmonellosis | peptide-utilizing carbon starvation protein | reduced virulence |
| IKHGILIC_00092 | PHI:2690 | FimH | 99.3 | 7.3e-169 | 1 | 300 | 1.0000 | 1.0000 | rodents | Crohn's disease | adhesion | reduced virulence |
| IKHGILIC_00093 | PHI:123639 | fimG | 97.6 | 1.4e-84 | 1 | 167 | 1.0000 | 1.0000 | rodents | neonatal meningitis | fimbrial protein | reduced virulence |
| IKHGILIC_00097 | PHI:10208 | fimI | 74.8 | 5.4e-73 | 3 | 165 | 0.9879 | 0.9157 | rodents | pneumonia | pilin (type 1 fimbria component protein) | unaffected pathogenicity |
| IKHGILIC_00098 | PHI:7205 | fimA | 90.8 | 1.3e-80 | 1 | 182 | 1.0000 | 1.0000 | rabbits and hares | urinary tract infection | type-1 fimbrial protein, A chain | reduced virulence |
| IKHGILIC_00110 | PHI:8004 | fecI | 100 | 1.3e-93 | 1 | 173 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | RNA polymerase sigma factor | reduced virulence |
| IKHGILIC_00111 | PHI:8005 | fecR | 100 | 5.1e-181 | 1 | 317 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fec operon regulator | reduced virulence |
| IKHGILIC_00112 | PHI:8006 | fecA | 99.9 | 0 | 1 | 774 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | ferric citrate outer membrane transporter | reduced virulence |
| IKHGILIC_00113 | PHI:8007 | fecB | 99 | 9.2e-164 | 1 | 300 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate-binding periplasmic protein | reduced virulence |
| IKHGILIC_00114 | PHI:8008 | fecC | 99.7 | 2.7e-180 | 1 | 332 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| IKHGILIC_00115 | PHI:8009 | fecD | 99.7 | 6.7e-173 | 1 | 318 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport system permease protein | reduced virulence |
| IKHGILIC_00116 | PHI:8010 | fecE | 99.6 | 4e-144 | 1 | 255 | 1.0000 | 1.0000 | even-toed ungulates | bovine mastitis | Fe(3+) dicitrate transport ATP-binding protein | reduced virulence |
| IKHGILIC_00171 | PHI:7020 | cpdB | 99.2 | 0 | 1 | 647 | 1.0000 | 1.0000 | birds | colibacillosis | 2′,3′-cyclic phosphodiesterase | reduced virulence |
| IKHGILIC_00213 | PHI:12252 | nsrR | 76.6 | 5.6e-55 | 1 | 141 | 1.0000 | 0.9456 | monocots | Stewart's wilt; leaf blight (maize) | DNA-binding transcriptional regulator | unaffected pathogenicity |
| IKHGILIC_00214 | PHI:2625 | purA | 99.5 | 2.6e-252 | 1 | 432 | 1.0000 | 1.0000 | rodents | food poisoning | pathogenicity island | reduced virulence |
| IKHGILIC_00219 | PHI:2687 | hfq | 94.1 | 1.4e-47 | 1 | 102 | 1.0000 | 1.0000 | rodents | food poisoning | regulators of systemic infection | reduced virulence |
| IKHGILIC_00237 | PHI:2960 | frdA | 85 | 4.2e-309 | 1 | 602 | 1.0000 | 1.0000 | bony fishes | enteric septicemia | fumarate reductase | reduced virulence |
| IKHGILIC_00241 | PHI:6133 | blaCMY-2 | 75.3 | 7.4e-174 | 11 | 388 | 0.9742 | 1.0000 | rodents | salmonellosis | beta-lactamase | reduced virulence |
| IKHGILIC_00246 | PHI:6420 | EF-P | 98.9 | 4.2e-106 | 1 | 188 | 1.0000 | 1.0000 | rodents | salmonellosis | elongation factor | increased virulence (hypervirulence) |
| IKHGILIC_00255 | PHI:123643 | dcuA | 100 | 1.4e-229 | 1 | 433 | 1.0000 | 1.0000 | rodents | neonatal meningitis | regulatory protein | unaffected pathogenicity |
| IKHGILIC_00261 | PHI:11871 | cadB | 83.1 | 5.1e-211 | 1 | 443 | 0.9977 | 1.0000 | primates | edwardsiellosis | lysine-dependent acid resistance (LDAR) system membrane protein | reduced virulence |
| IKHGILIC_00269 | PHI:123638 | DcuR | 88.7 | 1.7e-123 | 1 | 239 | 1.0000 | 1.0000 | birds | pullorum disease | two-component system | increased virulence (hypervirulence) |
| IKHGILIC_00271 | PHI:10047 | fumB | 93.1 | 4.7e-307 | 1 | 548 | 1.0000 | 1.0000 | rodents | salmonellosis | fumarate hydratase class I | reduced virulence |
| IKHGILIC_00280 | PHI:4497 | PmrA | 90.5 | 3.8e-114 | 1 | 222 | 1.0000 | 1.0000 | rodents | salmonellosis | lipopolysaccharide modification regulator | increased virulence (hypervirulence) |
| IKHGILIC_00313 | PHI:124242 | gltP | 99.5 | 3.3e-231 | 1 | 437 | 1.0000 | 1.0000 | rodents | neonatal meningitis | glutamate transporters | reduced virulence |
| IKHGILIC_00318 | PHI:10999 | nrfC | 100 | 1.5e-134 | 1 | 223 | 1.0000 | 1.0000 | rodents | infection | putative menaquinol-cytochrome c reductase 4Fe-4S subunit | unaffected pathogenicity |
| IKHGILIC_00321 | PHI:9227 | acs | 100 | 0 | 1 | 652 | 1.0000 | 1.0000 | birds | avian colisepticemia | acetyl-coenzyme A synthetase | reduced virulence |
| IKHGILIC_00322 | PHI:9228 | yjcH | 100 | 9.3e-55 | 1 | 104 | 1.0000 | 1.0000 | birds | avian colisepticemia | conserved inner membrane protein | reduced virulence |
| IKHGILIC_00323 | PHI:9229 | actP | 99.8 | 4.5e-302 | 1 | 549 | 1.0000 | 1.0000 | birds | avian colisepticemia | acetate/glycolate:cation symporter | reduced virulence |
| IKHGILIC_00341 | PHI:7661 | pspG | 82.5 | 8.2e-27 | 1 | 80 | 1.0000 | 1.0000 | rodents | salmonellosis | phage-shock protein | unaffected pathogenicity |
| Gene Name | cazy_id | identity | evalue | qstart | qend | query_coverage | subject_coverage |
|---|---|---|---|---|---|---|---|
| IKHGILIC_00103 | VEF23364.1|CE0 | 100 | 3.14e-255 | 1 | 326 | 1 | 1 |
| IKHGILIC_00147 | ARV30398.1|GH13_29 | 100 | 0 | 1 | 551 | 1 | 1 |
| IKHGILIC_00176 | AWK41767.1|GH13_3 | 75.3 | 1.3e-241 | 16 | 464 | 0.9553 | 0.9594 |
| IKHGILIC_00274 | QEO90356.1|GH4 | 100 | 0 | 1 | 451 | 1 | 1 |
| IKHGILIC_00348 | BCA44326.1|GH24 | 86.5 | 0 | 3 | 1159 | 0.9983 | 0.9448 |
| IKHGILIC_00362 | QAS91308.1|GH24 | 99.2 | 0 | 71 | 675 | 0.8963 | 0.8473 |
| Gene Name | tcid | identity | evalue | qstart | qend | query_coverage | subject_coverage | class_field | class_term | subclass | subclass_term | family | family_term |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| IKHGILIC_00002 | 1.E.1.1.2 | 94.4 | 1.1e-33 | 1 | 71 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.E | Holins | 1.E.1 | The P21 Holin S (P21 Holin) Family |
| IKHGILIC_00035 | 2.A.79.2.1 | 100 | 9.1e-144 | 1 | 256 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.79 | The Threonine/Serine Exporter (ThrE) Family |
| IKHGILIC_00043 | 2.A.1.14.33 | 99.3 | 3.9e-259 | 1 | 453 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IKHGILIC_00053 | 2.A.1.14.9 | 88.2 | 4.7e-236 | 1 | 458 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IKHGILIC_00057 | 2.A.114.1.10 | 96.4 | 0 | 1 | 716 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.114 | The Putative Peptide Transporter Carbon Starvation CstA (CstA) Family |
| IKHGILIC_00072 | 2.A.1.2.52 | 97.8 | 6e-222 | 1 | 410 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IKHGILIC_00078 | 2.A.1.51.2 | 91 | 1.8e-191 | 1 | 387 | 0.9872 | 0.9872 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IKHGILIC_00080 | 9.A.5.4.2 | 100 | 2.5e-121 | 1 | 227 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.A | Recognized transporters of unknown biochemical mechanism | 9.A.5 | The Putative Arginine Transporter (ArgW) Family |
| IKHGILIC_00081 | 9.B.156.1.1 | 99.3 | 1e-78 | 1 | 153 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.156 | The Putative 4-10 TMS Permease (4-10P) Family |
| IKHGILIC_00090 | 2.A.8.1.3 | 100 | 1.3e-235 | 1 | 447 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.8 | The Gluconate:H+ Symporter (GntP) Family |
| IKHGILIC_00095 | 1.B.11.3.9 | 98.9 | 0 | 1 | 878 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.11 | The Outer Membrane Fimbrial Usher Porin (FUP) Family |
| IKHGILIC_00101 | 1.B.35.2.1 | 100 | 1.4e-143 | 1 | 238 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.35 | The Oligogalacturonate-specific Porin (KdgM) Family |
| IKHGILIC_00112 | 1.B.14.1.20 | 99.9 | 0 | 1 | 774 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.14 | The Outer Membrane Receptor (OMR) Family |
| IKHGILIC_00113 | 3.A.1.14.1 | 99 | 2.1e-163 | 1 | 300 | 1.0000 | 1.1765 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00114 | 3.A.1.14.1 | 99.7 | 6e-180 | 1 | 332 | 1.0000 | 1.3020 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00115 | 3.A.1.14.1 | 99.7 | 1.5e-172 | 1 | 318 | 1.0000 | 1.2471 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00116 | 3.A.1.14.1 | 99.6 | 9e-144 | 1 | 255 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00130 | 9.B.318.1.1 | 98.5 | 7.8e-219 | 1 | 398 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.318 | The YjgJ or DUF898 (DUF898) Family |
| IKHGILIC_00144 | 3.A.3.4.1 | 90.2 | 0 | 3 | 898 | 0.9978 | 0.9933 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.3 | The P-type ATPase (P-ATPase) Superfamily |
| IKHGILIC_00146 | 4.A.1.2.4 | 99.6 | 9.2e-267 | 1 | 473 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.1 | The PTS Glucose-Glucoside (Glc) Family |
| IKHGILIC_00157 | 3.A.1.2.25 | 99 | 3.4e-280 | 1 | 500 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00163 | 9.B.121.6.2 | 99.4 | 0 | 1 | 1259 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.121 | The AsmA (AsmA) Family |
| IKHGILIC_00164 | 1.B.33.2.4 | 100 | 0 | 1 | 577 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.33 | The Outer Membrane Protein Insertion Porin (Bam Complex) (OmpIP) Family |
| IKHGILIC_00167 | 1.A.112.2.11 | 100 | 1.6e-249 | 1 | 447 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.112 | The Cyclin M Mg2+ Exporter (CNNM) Family |
| IKHGILIC_00174 | 2.A.7.3.19 | 99.1 | 2e-180 | 1 | 321 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.7 | The Drug/Metabolite Transporter (DMT) Superfamily |
| IKHGILIC_00176 | 2.A.3.1.7 | 100 | 3e-262 | 1 | 470 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IKHGILIC_00196 | 4.A.7.1.1 | 96.1 | 8.6e-81 | 1 | 154 | 1.0000 | 1.5248 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IKHGILIC_00197 | 4.A.7.1.1 | 99 | 5.5e-52 | 1 | 101 | 1.0000 | 1.0000 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IKHGILIC_00198 | 4.A.7.1.1 | 99.8 | 9e-259 | 1 | 465 | 1.0000 | 4.6040 | 4 | Group Translocators | 4.A | Phosphotransfer-driven Group Translocators (PTS) | 4.A.7 | The PTS L-Ascorbate (L-Asc) Family |
| IKHGILIC_00207 | 9.B.358.1.4 | 99.2 | 2.1e-67 | 1 | 132 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.358 | The DUF350 domain-containing (DUF350) Family |
| IKHGILIC_00219 | 9.B.468.1.1 | 100 | 5.2e-50 | 1 | 102 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.468 | The Hfq RNA Chaparone Protein (Hfq) Family |
| IKHGILIC_00232 | 1.A.23.1.3 | 99.7 | 0 | 1 | 1107 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.A | α-Type Channels | 1.A.23 | The Small Conductance Mechanosensitive Ion Channel (MscS) Family |
| IKHGILIC_00233 | 9.B.444.1.2 | 100 | 6.2e-56 | 1 | 100 | 1.0000 | 0.9615 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.444 | The Uncharacterized YjeO/YgiZ (YjeO/YgiZ) Family |
| IKHGILIC_00235 | 2.A.3.7.5 | 99.8 | 1.3e-282 | 1 | 500 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IKHGILIC_00241 | 8.A.212.1.4 | 70.8 | 1.7e-165 | 11 | 387 | 0.9716 | 1.0000 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.212 | The d-Amino Acid Peptidase (dAAP) Family |
| IKHGILIC_00243 | 2.A.7.1.4 | 100 | 9.1e-50 | 1 | 105 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.7 | The Drug/Metabolite Transporter (DMT) Superfamily |
| IKHGILIC_00244 | 9.B.13.1.1 | 100 | 1.9e-18 | 1 | 48 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.13 | The Putative Pore-forming Entericidin (ECN) Family |
| IKHGILIC_00252 | 2.A.3.13.1 | 100 | 5.7e-236 | 1 | 418 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IKHGILIC_00255 | 2.A.13.1.1 | 100 | 3.1e-229 | 1 | 433 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.13 | The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family |
| IKHGILIC_00257 | 5.A.1.1.1 | 98.9 | 0 | 1 | 565 | 1.0000 | 1.0000 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.1 | The Disulfide Bond Oxidoreductase D (DsbD) Family |
| IKHGILIC_00261 | 2.A.3.2.2 | 100 | 1.4e-248 | 1 | 444 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IKHGILIC_00263 | 2.A.17.1.5 | 100 | 1e-273 | 1 | 485 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.17 | The Proton-dependent Oligopeptide Transporter (POT/PTR) Family |
| IKHGILIC_00270 | 2.A.13.1.2 | 100 | 2.4e-245 | 1 | 446 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.13 | The C<sub>4</sub>-Dicarboxylate Uptake (Dcu) Family |
| IKHGILIC_00273 | 2.A.2.1.1 | 100 | 1.8e-262 | 1 | 469 | 1.0000 | 0.9915 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.2 | The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family |
| IKHGILIC_00278 | 2.A.3.2.5 | 100 | 6.2e-249 | 1 | 445 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.3 | The Amino Acid-Polyamine-Organocation (APC) Family |
| IKHGILIC_00283 | 2.A.1.6.4 | 99.4 | 7.6e-280 | 1 | 500 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.1 | The Major Facilitator Superfamily (MFS) |
| IKHGILIC_00288 | 3.A.1.9.1 | 98.9 | 1.4e-144 | 1 | 262 | 1.0000 | 1.0116 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00289 | 3.A.1.9.1 | 100 | 3.4e-191 | 1 | 338 | 1.0000 | 1.3050 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00290 | 3.A.1.9.1 | 100 | 2.7e-143 | 1 | 259 | 1.0000 | 1.0000 | 3 | Primary Active Transporters | 3.A | P-P-bond-hydrolysis-driven transporters | 3.A.1 | The ATP-binding Cassette (ABC) Superfamily |
| IKHGILIC_00306 | 8.A.1.1.3 | 99.4 | 1.2e-183 | 1 | 343 | 1.0000 | 1.0000 | 8 | Accessory Factors Involved in Transport | 8.A | Auxiliary transport proteins | 8.A.1 | The Membrane Fusion Protein (MFP) Family |
| IKHGILIC_00307 | 2.A.85.6.1 | 98.8 | 0 | 1 | 683 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.85 | The Aromatic Acid Exporter (ArAE) Family |
| IKHGILIC_00308 | 1.B.17.3.9 | 98.2 | 1.8e-265 | 1 | 488 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.17 | The Outer Membrane Factor (OMF) Family |
| IKHGILIC_00310 | 3.D.1.9.2 | 100 | 0 | 1 | 559 | 1.0000 | 2.1922 | 3 | Primary Active Transporters | 3.D | Oxidoreduction-driven transporters | 3.D.1 | The H+ or Na+-translocating NADH Dehydrogenase (NDH) Family |
| IKHGILIC_00313 | 2.A.23.1.1 | 99.5 | 7.5e-231 | 1 | 437 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.23 | The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family |
| IKHGILIC_00317 | 5.A.3.5.3 | 100 | 3.6e-174 | 1 | 318 | 1.0000 | 1.0000 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.3 | The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family |
| IKHGILIC_00318 | 5.A.3.5.3 | 100 | 3.3e-134 | 1 | 223 | 1.0000 | 0.7013 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.3 | The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family |
| IKHGILIC_00320 | 5.A.3.5.3 | 100 | 9.2e-291 | 1 | 478 | 1.0000 | 1.5031 | 5 | Transmembrane Electron Carriers | 5.A | Transmembrane 2-electron transfer carriers | 5.A.3 | The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family |
| IKHGILIC_00322 | 9.B.136.1.1 | 100 | 2.1e-54 | 1 | 104 | 1.0000 | 1.0000 | 9 | Incompletely Characterized Transport Systems | 9.B | Putative transport proteins | 9.B.136 | The 2 TMS Membrane Protein, YjcH (YjcH) Family |
| IKHGILIC_00323 | 2.A.21.7.2 | 99.8 | 1e-301 | 1 | 549 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.21 | The Solute:Sodium Symporter (SSS) Family |
| IKHGILIC_00325 | 2.A.36.3.1 | 99.8 | 1.7e-296 | 1 | 549 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.36 | The Monovalent Cation:Proton Antiporter-1 (CPA1) Family |
| IKHGILIC_00326 | 2.A.40.7.5 | 100 | 6.5e-238 | 1 | 449 | 1.0000 | 1.0000 | 2 | Electrochemical Potential-driven Transporters | 2.A | Porters (uniporters, symporters, antiporters) | 2.A.40 | The Nucleobase/Ascorbate Transporter (NAT) or Nucleobase:Cation Symporter-2 (NCS2) Family |
| IKHGILIC_00347 | 1.B.6.2.20 | 94 | 9e-107 | 1 | 199 | 1.0000 | 1.0000 | 1 | Channels/Pores | 1.B | β-Barrel Porins | 1.B.6 | The OmpA-OmpF Porin (OOP) Family |
| IKHGILIC_00348 | 1.E.1.1.7 | 82.7 | 0 | 488 | 1158 | 0.5789 | 0.9403 | 1 | Channels/Pores | 1.E | Holins | 1.E.1 | The P21 Holin S (P21 Holin) Family |