Annotation Categories of the Plasmid Cluster
Summary of the plasmid cluster
Basic Information about the Plasmid Cluster
Cluster Information |
Plasmid Cluster ID |
C1303 |
Reference Plasmid |
NZ_CP149345.1 |
Reference Plasmid Size |
58440 |
Reference Plasmid GC Content |
0.46 |
Reference Plasmid Mobility Type |
conjugative |
Mutation sites in the plasmid cluster
The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..
mutid |
gname |
pos |
count |
tissue |
frequnt |
biotype |
consequence |
impact |
nucchange |
aachange |
M0206034 |
MFBJLJKI_00001 |
319 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
196A>G |
Ile66Val |
M0206035 |
MFBJLJKI_00003 |
1460 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-33G>A |
None |
M0206036 |
MFBJLJKI_00003 |
1552 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-125A>G |
None |
M0206037 |
MFBJLJKI_00004 |
1780 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
231G>T |
Gly77Gly |
M0206038 |
MFBJLJKI_00004 |
1792 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
219G>A |
Val73Val |
M0206039 |
MFBJLJKI_00004 |
1859 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
152C>T |
Ala51Val |
M0206040 |
MFBJLJKI_00004 |
1951 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
60C>A |
Ile20Ile |
M0206041 |
MFBJLJKI_00004 |
1972 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
39A>T |
Arg13Arg |
M0206042 |
MFBJLJKI_00003 |
4343 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2916G>A |
None |
M0206043 |
MFBJLJKI_00003 |
4345 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2918T>C |
None |
M0206044 |
MFBJLJKI_00003 |
4412 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2985G>A |
None |
M0206045 |
MFBJLJKI_00003 |
4449 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3022T>C |
None |
M0206046 |
MFBJLJKI_00003 |
4476 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3049A>G |
None |
M0206047 |
MFBJLJKI_00003 |
4570 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3143T>C |
None |
M0206048 |
MFBJLJKI_00003 |
4571 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3144T>G |
None |
M0206049 |
MFBJLJKI_00003 |
4577 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3150A>G |
None |
M0206050 |
MFBJLJKI_00003 |
4585 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3158C>T |
None |
M0206051 |
MFBJLJKI_00003 |
4586 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3159A>G |
None |
M0206052 |
MFBJLJKI_00003 |
4596 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3169C>A |
None |
M0206053 |
MFBJLJKI_00003 |
4597 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3170T>C |
None |
M0206054 |
MFBJLJKI_00003 |
4606 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3179A>G |
None |
M0206055 |
MFBJLJKI_00003 |
4668 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3241G>A |
None |
M0206056 |
MFBJLJKI_00003 |
4792 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3365A>G |
None |
M0206057 |
MFBJLJKI_00003 |
4861 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3434G>A |
None |
M0206058 |
MFBJLJKI_00003 |
4890 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3463G>A |
None |
M0206059 |
MFBJLJKI_00003 |
4907 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3480T>C |
None |
M0206060 |
MFBJLJKI_00003 |
4933 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3506T>C |
None |
M0206061 |
MFBJLJKI_00003 |
4947 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3520T>C |
None |
M0206062 |
MFBJLJKI_00008 |
5218 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
27C>T |
Arg9Arg |
M0206063 |
MFBJLJKI_00008 |
5278 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
87G>A |
Lys29Lys |
M0206064 |
MFBJLJKI_00005 |
7728 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4872G>A |
None |
M0206065 |
MFBJLJKI_00005 |
7754 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4898C>T |
None |
M0206066 |
MFBJLJKI_00005 |
7800 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4944A>G |
None |
M0206067 |
MFBJLJKI_00005 |
7808 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4952G>A |
None |
M0206068 |
MFBJLJKI_00006 |
7869 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-4153C>T |
None |
M0206069 |
MFBJLJKI_00016 |
7985 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
75A>G |
Pro25Pro |
M0206070 |
MFBJLJKI_00016 |
8027 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
117G>A |
Leu39Leu |
M0206071 |
MFBJLJKI_00016 |
8056 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
146G>T |
Gly49Val |
M0206072 |
MFBJLJKI_00016 |
8244 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
334T>C |
Leu112Leu |
M0206073 |
MFBJLJKI_00017 |
8483 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
25T>C |
Tyr9His |
M0206074 |
MFBJLJKI_00017 |
8536 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
78T>C |
His26His |
M0206075 |
MFBJLJKI_00017 |
8639 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
181G>A |
Val61Ile |
M0206076 |
MFBJLJKI_00017 |
8746 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
288G>A |
Glu96Glu |
M0206077 |
MFBJLJKI_00017 |
8755 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
297T>G |
Asp99Glu |
M0206078 |
MFBJLJKI_00017 |
8785 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
327A>G |
Gln109Gln |
M0206079 |
MFBJLJKI_00017 |
8869 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
411A>G |
Lys137Lys |
M0206080 |
MFBJLJKI_00017 |
8944 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
486T>C |
Tyr162Tyr |
M0206081 |
MFBJLJKI_00017 |
8947 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
489T>C |
His163His |
M0206082 |
MFBJLJKI_00017 |
8953 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
495C>T |
Asp165Asp |
M0206083 |
MFBJLJKI_00017 |
9019 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
561C>T |
Asp187Asp |
M0206084 |
MFBJLJKI_00017 |
9191 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
733G>A |
Val245Ile |
M0206085 |
MFBJLJKI_00017 |
9199 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
741C>T |
Tyr247Tyr |
M0206086 |
MFBJLJKI_00017 |
9397 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
939C>T |
Asn313Asn |
M0206087 |
MFBJLJKI_00017 |
9490 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1032C>T |
Ser344Ser |
M0206088 |
MFBJLJKI_00017 |
9610 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1152G>A |
Lys384Lys |
M0206089 |
MFBJLJKI_00017 |
9617 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1159A>G |
Ser387Gly |
M0206090 |
MFBJLJKI_00017 |
9619 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1161T>C |
Ser387Ser |
M0206091 |
MFBJLJKI_00018 |
9626 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-800G>T |
None |
M0206092 |
MFBJLJKI_00018 |
9634 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-792A>G |
None |
M0206093 |
MFBJLJKI_00018 |
9646 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-780A>C |
None |
M0206094 |
MFBJLJKI_00018 |
9647 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-779A>G |
None |
M0206095 |
MFBJLJKI_00018 |
9656 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-770C>A |
None |
M0206096 |
MFBJLJKI_00018 |
9671 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-755T>C |
None |
M0206097 |
MFBJLJKI_00018 |
9672 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-754G>T |
None |
M0206098 |
MFBJLJKI_00018 |
9675 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-751A>C |
None |
M0206099 |
MFBJLJKI_00018 |
9686 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-740G>A |
None |
M0206100 |
MFBJLJKI_00018 |
9762 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-664T>G |
None |
M0206101 |
MFBJLJKI_00018 |
9778 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-648C>T |
None |
M0206102 |
MFBJLJKI_00018 |
9779 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-647A>G |
None |
M0206103 |
MFBJLJKI_00018 |
9783 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-643A>C |
None |
M0206104 |
MFBJLJKI_00018 |
9789 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-637T>C |
None |
M0206105 |
MFBJLJKI_00018 |
9790 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-636G>A |
None |
M0206106 |
MFBJLJKI_00018 |
9850 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-576A>T |
None |
M0206107 |
MFBJLJKI_00018 |
9860 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-566C>T |
None |
M0206108 |
MFBJLJKI_00018 |
9861 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-565T>C |
None |
M0206109 |
MFBJLJKI_00019 |
10781 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
111A>G |
Ala37Ala |
M0206110 |
MFBJLJKI_00019 |
10847 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
177A>T |
Pro59Pro |
M0206111 |
MFBJLJKI_00019 |
10931 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
261A>G |
Thr87Thr |
M0206112 |
MFBJLJKI_00019 |
10952 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
282C>T |
Phe94Phe |
M0206113 |
MFBJLJKI_00019 |
10955 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
285C>T |
Gly95Gly |
M0206114 |
MFBJLJKI_00019 |
11167 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
497T>G |
Ile166Ser |
M0206115 |
MFBJLJKI_00019 |
11180 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
510C>T |
Pro170Pro |
M0206116 |
MFBJLJKI_00020 |
11562 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
267T>C |
Val89Val |
M0206117 |
MFBJLJKI_00021 |
11745 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
135T>C |
Leu45Leu |
M0206118 |
MFBJLJKI_00021 |
11839 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
229T>C |
Ser77Pro |
M0206119 |
MFBJLJKI_00021 |
11874 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
264T>C |
Tyr88Tyr |
M0206120 |
MFBJLJKI_00021 |
11890 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
280G>A |
Asp94Asn |
M0206121 |
MFBJLJKI_00021 |
11985 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
375C>T |
Asp125Asp |
M0206122 |
MFBJLJKI_00021 |
11988 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
378C>T |
Asn126Asn |
M0206123 |
MFBJLJKI_00021 |
12000 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
390G>A |
Thr130Thr |
M0206124 |
MFBJLJKI_00021 |
12093 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
483C>T |
Leu161Leu |
M0206125 |
MFBJLJKI_00021 |
12164 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
554A>G |
Asp185Gly |
M0206126 |
MFBJLJKI_00021 |
12312 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
702G>A |
Thr234Thr |
M0206127 |
MFBJLJKI_00021 |
12327 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
717A>C |
Arg239Arg |
M0206128 |
MFBJLJKI_00021 |
12328 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
718G>A |
Gly240Ser |
M0206129 |
MFBJLJKI_00021 |
12363 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
753A>T |
Val251Val |
M0206130 |
MFBJLJKI_00021 |
12558 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
948T>C |
Asp316Asp |
M0206131 |
MFBJLJKI_00021 |
12621 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1011T>C |
Cys337Cys |
M0206132 |
MFBJLJKI_00021 |
12780 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1170G>A |
Thr390Thr |
M0206133 |
MFBJLJKI_00021 |
12873 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1263C>T |
Thr421Thr |
M0206134 |
MFBJLJKI_00021 |
12915 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1305C>T |
Asp435Asp |
M0206135 |
MFBJLJKI_00021 |
12984 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1374C>T |
Gly458Gly |
M0206136 |
MFBJLJKI_00021 |
13002 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1392G>A |
Gln464Gln |
M0206137 |
MFBJLJKI_00021 |
13062 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1452T>C |
Ala484Ala |
M0206138 |
MFBJLJKI_00021 |
13137 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1527T>C |
Leu509Leu |
M0206139 |
MFBJLJKI_00021 |
13452 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1842C>T |
Pro614Pro |
M0206140 |
MFBJLJKI_00021 |
13854 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
2244T>C |
Ala748Ala |
M0206141 |
MFBJLJKI_00021 |
14151 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
2541C>T |
Ser847Ser |
M0206142 |
MFBJLJKI_00021 |
14295 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
2685T>A |
Asp895Glu |
M0206143 |
MFBJLJKI_00023 |
15194 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
61A>T |
Ile21Phe |
M0206144 |
MFBJLJKI_00025 |
16654 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-95C>T |
None |
M0206145 |
MFBJLJKI_00025 |
16823 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
75T>C |
Asn25Asn |
M0206146 |
MFBJLJKI_00025 |
16937 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
189A>G |
Thr63Thr |
M0206147 |
MFBJLJKI_00025 |
16994 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
246T>C |
Ser82Ser |
M0206148 |
MFBJLJKI_00025 |
17034 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
286C>A |
Arg96Arg |
M0206149 |
MFBJLJKI_00025 |
17084 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
336C>T |
Phe112Phe |
M0206150 |
MFBJLJKI_00025 |
17115 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
367A>G |
Thr123Ala |
M0206151 |
MFBJLJKI_00025 |
17139 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
391G>A |
Ala131Thr |
M0206152 |
MFBJLJKI_00025 |
17256 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
508A>G |
Thr170Ala |
M0206153 |
MFBJLJKI_00025 |
17258 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
510G>A |
Thr170Thr |
M0206154 |
MFBJLJKI_00025 |
17390 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
642A>G |
Ser214Ser |
M0206155 |
MFBJLJKI_00026 |
17524 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
58A>C |
Asn20His |
M0206156 |
MFBJLJKI_00026 |
17574 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
108A>C |
Ile36Ile |
M0206157 |
MFBJLJKI_00026 |
17676 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
210C>T |
Thr70Thr |
M0206158 |
MFBJLJKI_00026 |
17748 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
282A>G |
Gln94Gln |
M0206159 |
MFBJLJKI_00026 |
17774 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
308C>A |
Ala103Glu |
M0206160 |
MFBJLJKI_00026 |
17784 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
318C>T |
Asn106Asn |
M0206161 |
MFBJLJKI_00026 |
18164 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
698C>A |
Pro233Gln |
M0206162 |
MFBJLJKI_00026 |
18254 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
788C>T |
Ala263Val |
M0206163 |
MFBJLJKI_00026 |
18323 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
857T>A |
Leu286Gln |
M0206164 |
MFBJLJKI_00027 |
18836 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
444T>C |
Asp148Asp |
M0206165 |
MFBJLJKI_00027 |
18857 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
465G>A |
Gln155Gln |
M0206166 |
MFBJLJKI_00027 |
19259 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
867C>A |
Pro289Pro |
M0206167 |
MFBJLJKI_00027 |
19307 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
915T>A |
Ser305Ser |
M0206168 |
MFBJLJKI_00027 |
19385 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
993C>G |
Ala331Ala |
M0206169 |
MFBJLJKI_00027 |
19400 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1008A>T |
Ala336Ala |
M0206170 |
MFBJLJKI_00027 |
19406 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1014C>T |
Asn338Asn |
M0206171 |
MFBJLJKI_00027 |
19418 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1026C>T |
Ser342Ser |
M0206172 |
MFBJLJKI_00029 |
21938 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1305A>C |
Gly435Gly |
M0206173 |
MFBJLJKI_00034 |
25349 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
410T>C |
Leu137Ser |
M0206174 |
MFBJLJKI_00035 |
26751 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1221G>T |
Lys407Asn |
M0206175 |
MFBJLJKI_00036 |
27147 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
351C>T |
Cys117Cys |
M0206176 |
MFBJLJKI_00036 |
27358 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
562A>C |
Lys188Gln |
M0206177 |
MFBJLJKI_00037 |
27520 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
144A>G |
Gln48Gln |
M0206178 |
MFBJLJKI_00037 |
27614 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
238G>T |
Ala80Ser |
M0206179 |
MFBJLJKI_00037 |
27743 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
367G>A |
Ala123Thr |
M0206180 |
MFBJLJKI_00037 |
27769 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
393A>T |
Ile131Ile |
M0206181 |
MFBJLJKI_00037 |
27871 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
495C>T |
Ala165Ala |
M0206182 |
MFBJLJKI_00037 |
27886 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
510A>C |
Gly170Gly |
M0206183 |
MFBJLJKI_00037 |
27916 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
540T>G |
Pro180Pro |
M0206184 |
MFBJLJKI_00037 |
27940 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
564C>T |
Gly188Gly |
M0206185 |
MFBJLJKI_00037 |
27967 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
591G>T |
Thr197Thr |
M0206186 |
MFBJLJKI_00037 |
27970 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
594C>A |
Pro198Pro |
M0206187 |
MFBJLJKI_00037 |
28057 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
681A>T |
Arg227Arg |
M0206188 |
MFBJLJKI_00037 |
28111 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
735A>C |
Thr245Thr |
M0206189 |
MFBJLJKI_00037 |
28219 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
843G>A |
Ala281Ala |
M0206190 |
MFBJLJKI_00037 |
28243 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
867G>A |
Arg289Arg |
M0206191 |
MFBJLJKI_00037 |
28291 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
915G>A |
Thr305Thr |
M0206192 |
MFBJLJKI_00037 |
28473 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1097A>C |
Glu366Ala |
M0206193 |
MFBJLJKI_00037 |
28495 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1119T>A |
Ala373Ala |
M0206194 |
MFBJLJKI_00037 |
28509 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1133T>C |
Val378Ala |
M0206195 |
MFBJLJKI_00037 |
28675 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1299A>T |
Thr433Thr |
M0206196 |
MFBJLJKI_00037 |
28719 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1343T>A |
Val448Glu |
M0206197 |
MFBJLJKI_00037 |
28777 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1401T>A |
Thr467Thr |
M0206198 |
MFBJLJKI_00037 |
28789 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1413G>T |
Leu471Leu |
M0206199 |
MFBJLJKI_00037 |
28807 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1431T>C |
Val477Val |
M0206200 |
MFBJLJKI_00037 |
28837 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1461G>A |
Pro487Pro |
M0206201 |
MFBJLJKI_00037 |
28843 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1467C>T |
Phe489Phe |
M0206202 |
MFBJLJKI_00037 |
28852 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1476T>C |
Ala492Ala |
M0206203 |
MFBJLJKI_00037 |
28876 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1500T>C |
Arg500Arg |
M0206204 |
MFBJLJKI_00037 |
28897 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1521T>C |
Asp507Asp |
M0206205 |
MFBJLJKI_00037 |
28909 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1533A>G |
Lys511Lys |
M0206206 |
MFBJLJKI_00037 |
28916 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1540T>C |
Leu514Leu |
M0206207 |
MFBJLJKI_00037 |
28921 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1545G>A |
Lys515Lys |
M0206208 |
MFBJLJKI_00037 |
28954 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1578C>T |
Gly526Gly |
M0206209 |
MFBJLJKI_00037 |
28957 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1581T>C |
Gly527Gly |
M0206210 |
MFBJLJKI_00037 |
28972 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1596G>T |
Ala532Ala |
M0206211 |
MFBJLJKI_00037 |
28975 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1599A>C |
Thr533Thr |
M0206212 |
MFBJLJKI_00037 |
28981 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1605T>A |
Ala535Ala |
M0206213 |
MFBJLJKI_00037 |
28996 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1620G>A |
Thr540Thr |
M0206214 |
MFBJLJKI_00037 |
29005 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1629G>A |
Lys543Lys |
M0206215 |
MFBJLJKI_00037 |
29023 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1647C>G |
Leu549Leu |
M0206216 |
MFBJLJKI_00037 |
29044 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1668G>T |
Pro556Pro |
M0206217 |
MFBJLJKI_00037 |
29058 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1682G>A |
Cys561Tyr |
M0206218 |
MFBJLJKI_00037 |
29080 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1704A>T |
Pro568Pro |
M0206219 |
MFBJLJKI_00037 |
29125 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1749A>G |
Lys583Lys |
M0206220 |
MFBJLJKI_00037 |
29129 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1753T>A |
Ser585Thr |
M0206221 |
MFBJLJKI_00037 |
29131 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1755T>A |
Ser585Ser |
M0206222 |
MFBJLJKI_00037 |
29162 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1786C>G |
Gln596Glu |
M0206223 |
MFBJLJKI_00037 |
29177 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1801T>C |
Leu601Leu |
M0206224 |
MFBJLJKI_00037 |
29215 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1839G>C |
Glu613Asp |
M0206225 |
MFBJLJKI_00037 |
29296 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1920G>A |
Lys640Lys |
M0206226 |
MFBJLJKI_00037 |
29311 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1935G>A |
Arg645Arg |
M0206227 |
MFBJLJKI_00037 |
29364 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1988C>T |
Ser663Phe |
M0206228 |
MFBJLJKI_00037 |
29379 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
2003T>C |
Ile668Thr |
M0206229 |
MFBJLJKI_00037 |
29386 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
2010A>G |
Ala670Ala |
M0206230 |
MFBJLJKI_00037 |
29392 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
2016C>A |
Ala672Ala |
M0206231 |
MFBJLJKI_00037 |
29449 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
2073T>C |
Ser691Ser |
M0206232 |
MFBJLJKI_00037 |
29476 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
2100C>T |
Val700Val |
M0206233 |
MFBJLJKI_00037 |
29514 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
2138C>T |
Ala713Val |
M0206234 |
MFBJLJKI_00038 |
29616 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
90G>A |
Lys30Lys |
M0206235 |
MFBJLJKI_00038 |
29658 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
132C>T |
Asp44Asp |
M0206236 |
MFBJLJKI_00038 |
29679 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
153T>G |
Val51Val |
M0206237 |
MFBJLJKI_00038 |
29691 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
165T>G |
Leu55Leu |
M0206238 |
MFBJLJKI_00038 |
29709 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
183T>C |
Ser61Ser |
M0206239 |
MFBJLJKI_00039 |
29835 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
87G>A |
Glu29Glu |
M0206240 |
MFBJLJKI_00039 |
29836 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
88A>G |
Ile30Val |
M0206241 |
MFBJLJKI_00043 |
30597 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3159C>T |
None |
M0206242 |
MFBJLJKI_00043 |
30622 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3134T>G |
None |
M0206243 |
MFBJLJKI_00043 |
30629 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3127G>A |
None |
M0206244 |
MFBJLJKI_00043 |
30640 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3116T>C |
None |
M0206245 |
MFBJLJKI_00043 |
30676 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-3080T>C |
None |
M0206246 |
MFBJLJKI_00041 |
30703 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1323A>G |
Glu441Glu |
M0206247 |
MFBJLJKI_00041 |
30795 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1231T>C |
Tyr411His |
M0206248 |
MFBJLJKI_00041 |
30928 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
1098A>G |
Leu366Leu |
M0206249 |
MFBJLJKI_00041 |
30930 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
1096C>A |
Leu366Ile |
M0206250 |
MFBJLJKI_00041 |
31030 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
996G>A |
Gln332Gln |
M0206251 |
MFBJLJKI_00041 |
31084 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
942A>C |
Thr314Thr |
M0206252 |
MFBJLJKI_00041 |
31106 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
920T>C |
Ile307Thr |
M0206253 |
MFBJLJKI_00041 |
31168 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
858T>C |
His286His |
M0206254 |
MFBJLJKI_00041 |
31216 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
810G>A |
Leu270Leu |
M0206255 |
MFBJLJKI_00041 |
31366 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
660C>T |
His220His |
M0206256 |
MFBJLJKI_00041 |
31416 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
610A>G |
Ile204Val |
M0206257 |
MFBJLJKI_00041 |
31432 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
594A>C |
Ser198Ser |
M0206258 |
MFBJLJKI_00041 |
31447 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
579A>T |
Pro193Pro |
M0206259 |
MFBJLJKI_00041 |
31450 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
576T>C |
Tyr192Tyr |
M0206260 |
MFBJLJKI_00041 |
31456 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
570A>G |
Glu190Glu |
M0206261 |
MFBJLJKI_00041 |
31481 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
545C>T |
Thr182Ile |
M0206262 |
MFBJLJKI_00041 |
31489 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
537T>G |
Asp179Glu |
M0206263 |
MFBJLJKI_00041 |
31538 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
488A>G |
Asp163Gly |
M0206264 |
MFBJLJKI_00042 |
32140 |
3 |
Gut |
0.75 |
protein_coding |
missense_variant |
MODERATE |
881A>T |
Asn294Ile |
M0206265 |
MFBJLJKI_00041 |
33057 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1032A>C |
None |
M0206266 |
MFBJLJKI_00041 |
33563 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-1538T>C |
None |
M0206267 |
MFBJLJKI_00041 |
34859 |
3 |
Gut |
0.75 |
protein_coding |
upstream_gene_variant |
MODIFIER |
-2834G>A |
None |
M0206268 |
MFBJLJKI_00045 |
35324 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
249C>T |
Leu83Leu |
M0206269 |
MFBJLJKI_00045 |
35498 |
3 |
Gut |
0.75 |
protein_coding |
synonymous_variant |
LOW |
423G>T |
Val141Val |
M0206270 |
MFBJLJKI_00045 |
35736 |
3 |
Gut |
0.75 |
protein_coding |
stop_lost&splice_region_variant |
HIGH |
661T>C |
Ter221Glnext*? |
Analysis of virulence factors contributing to bacterial pathogenicity
This table presents virulence factors identified within the plasmid cluster.
Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.
Gene Name |
vf_gene_id |
vf_name |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
vf_category |
gene_description |
condition |
Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact
This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.
Gene Name |
compound |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
group |
MFBJLJKI_00065 |
Arsenic (As), Menadione [class: Naphthoquinone] |
70.8 |
1.1e-62 |
34 |
194 |
0.8299 |
0.7816 |
experiment |
MFBJLJKI_00065 |
Arsenic (As) |
75.5 |
9.2e-74 |
6 |
194 |
0.9897 |
0.7680 |
prediction |
Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents
This table presents antimicrobial resistance genes identified within the plasmid cluster.
Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.
Gene Name |
aro_accession |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
drug_class |
amr_gene_family |
resistance_mechanism |
MFBJLJKI_00054 |
ARO:3000412 |
100 |
1.64e-185 |
18 |
288 |
0.9410 |
1.0000 |
sulfonamide antibiotic |
sulfonamide resistant sul |
antibiotic target replacement |
MFBJLJKI_00055 |
ARO:3002639 |
99.6 |
5.98e-202 |
1 |
267 |
1.0000 |
1.0000 |
aminoglycoside antibiotic |
APH(3'') |
antibiotic inactivation |
MFBJLJKI_00056 |
ARO:3002660 |
99.3 |
1.07e-205 |
1 |
278 |
1.0000 |
1.0000 |
aminoglycoside antibiotic |
APH(6) |
antibiotic inactivation |
MFBJLJKI_00059 |
ARO:3002705 |
99.3 |
1.88e-274 |
1 |
404 |
1.0000 |
1.0000 |
phenicol antibiotic |
major facilitator superfamily (MFS) antibiotic efflux pump |
antibiotic efflux |
MFBJLJKI_00068 |
ARO:3000873 |
100 |
5.12e-208 |
1 |
286 |
1.0000 |
1.0000 |
monobactam |
TEM beta-lactamase |
antibiotic inactivation |
Analysis of pathogenicity genes to explore pathogen-host interactions
This table presents host pathogen-host interactions within the plasmid cluster.
Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.
Gene Name |
phi_molconn_id |
host gene_name |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
host_descripton |
disease_name |
function |
phenotype_of_mutant |
Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation
This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.
Gene Name |
cazy_id |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
MFBJLJKI_00019 |
AEA95649.1|GH23 |
100 |
1.85e-153 |
1 |
215 |
1 |
1 |
Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification
This table presents transport proteins within the plasmid cluster.
Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.
Gene Name |
tcid |
identity |
evalue |
qstart |
qend |
query_coverage |
subject_coverage |
class_field |
class_term |
subclass |
subclass_term |
family |
family_term |
MFBJLJKI_00059 |
2.A.1.2.110 |
98.3 |
1e-213 |
1 |
404 |
1.0000 |
1.0000 |
2 |
Electrochemical Potential-driven Transporters |
2.A |
Porters (uniporters, symporters, antiporters) |
2.A.1 |
The Major Facilitator Superfamily (MFS) |