Annotation Categories of the Plasmid Cluster







Summary of the plasmid cluster

Basic Information about the Plasmid Cluster

  Cluster Information   Plasmid Cluster ID   C1422
  Reference Plasmid   NZ_OY725717.1
  Reference Plasmid Size   899693
  Reference Plasmid GC Content   0.60
  Reference Plasmid Mobility Type   non-mobilizable





Mutation sites in the plasmid cluster


The table lists mutations identified in the plasmid cluster.
Note: Mutations identified in this plasmid cluster are listed below. Click on a mutation ID to view full details..

mutid gname pos count tissue frequnt biotype consequence impact nucchange aachange
M0209633 PKENNHKI_00660 758838 15 Gut 0.18 protein_coding synonymous_variant LOW 984T>C Phe328Phe
M0209634 PKENNHKI_00660 758931 12 Gut 0.15 protein_coding synonymous_variant LOW 1077C>T Ser359Ser
M0209635 PKENNHKI_00660 758958 17 Gut 0.21 protein_coding synonymous_variant LOW 1104A>G Val368Val
M0209636 PKENNHKI_00660 759072 15 Gut 0.18 protein_coding synonymous_variant LOW 1218A>G Leu406Leu
M0209637 PKENNHKI_00660 759135 4 Gut 0.05 protein_coding synonymous_variant LOW 1281G>A Glu427Glu
M0209638 PKENNHKI_00660 759169 11 Gut 0.13 protein_coding missense_variant MODERATE 1315A>G Asn439Asp
M0209639 PKENNHKI_00660 759177 7 Gut 0.09 protein_coding synonymous_variant LOW 1323C>T Ala441Ala
M0209640 PKENNHKI_00660 759180 7 Gut 0.09 protein_coding synonymous_variant LOW 1326T>C Ala442Ala
M0209641 PKENNHKI_00660 759181 6 Gut 0.07 protein_coding missense_variant MODERATE 1327G>A Ala443Thr
M0209642 PKENNHKI_00660 759193 9 Gut 0.11 protein_coding missense_variant MODERATE 1339G>A Asp447Asn
M0209643 PKENNHKI_00660 759220 5 Gut 0.06 protein_coding missense_variant MODERATE 1366G>A Ala456Thr
M0209644 PKENNHKI_00660 759223 4 Gut 0.05 protein_coding missense_variant MODERATE 1369A>G Thr457Ala
M0209645 PKENNHKI_00660 759238 9 Gut 0.11 protein_coding missense_variant MODERATE 1384A>G Thr462Ala
M0209646 PKENNHKI_00660 759246 3 Gut 0.04 protein_coding synonymous_variant LOW 1392C>T Ala464Ala
M0209647 PKENNHKI_00660 759249 3 Gut 0.04 protein_coding synonymous_variant LOW 1395T>C Ala465Ala
M0209648 PKENNHKI_00660 759258 10 Gut 0.12 protein_coding missense_variant MODERATE 1404A>C Glu468Asp
M0209649 PKENNHKI_00660 759288 12 Gut 0.15 protein_coding synonymous_variant LOW 1434T>C Pro478Pro
M0209650 PKENNHKI_00660 759351 12 Gut 0.15 protein_coding synonymous_variant LOW 1497T>C Gly499Gly
M0209651 PKENNHKI_00660 759441 11 Gut 0.13 protein_coding synonymous_variant LOW 1587T>C Gly529Gly
M0209652 PKENNHKI_00660 759564 6 Gut 0.07 protein_coding synonymous_variant LOW 1710T>C Gly570Gly
M0209653 PKENNHKI_00660 759597 12 Gut 0.15 protein_coding synonymous_variant LOW 1743C>T Ala581Ala
M0209654 PKENNHKI_00660 759606 12 Gut 0.15 protein_coding synonymous_variant LOW 1752T>C Ile584Ile
M0209655 PKENNHKI_00659 759634 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -2064A>C None
M0209656 PKENNHKI_00659 759688 5 Gut 0.06 protein_coding upstream_gene_variant MODIFIER -2118A>T None
M0209657 PKENNHKI_00661 759739 4 Gut 0.05 protein_coding synonymous_variant LOW 30C>T Gly10Gly
M0209658 PKENNHKI_00661 759745 11 Gut 0.13 protein_coding synonymous_variant LOW 36C>G Val12Val
M0209659 PKENNHKI_00661 759763 7 Gut 0.09 protein_coding synonymous_variant LOW 54T>C Ala18Ala
M0209660 PKENNHKI_00661 759790 5 Gut 0.06 protein_coding synonymous_variant LOW 81T>C Arg27Arg
M0209661 PKENNHKI_00661 759835 8 Gut 0.10 protein_coding synonymous_variant LOW 126C>T Ala42Ala
M0209662 PKENNHKI_00661 759859 10 Gut 0.12 protein_coding synonymous_variant LOW 150T>C Pro50Pro
M0209663 PKENNHKI_00661 759868 7 Gut 0.09 protein_coding synonymous_variant LOW 159C>T Asp53Asp
M0209664 PKENNHKI_00661 759880 8 Gut 0.10 protein_coding synonymous_variant LOW 171A>G Lys57Lys
M0209665 PKENNHKI_00661 759883 8 Gut 0.10 protein_coding synonymous_variant LOW 174T>C Tyr58Tyr
M0209666 PKENNHKI_00661 759898 10 Gut 0.12 protein_coding synonymous_variant LOW 189T>C Asp63Asp
M0209667 PKENNHKI_00661 759899 9 Gut 0.11 protein_coding synonymous_variant LOW 190T>C Leu64Leu
M0209668 PKENNHKI_00661 759913 9 Gut 0.11 protein_coding synonymous_variant LOW 204T>C Phe68Phe
M0209669 PKENNHKI_00661 759919 8 Gut 0.10 protein_coding synonymous_variant LOW 210T>C Ile70Ile
M0209670 PKENNHKI_00661 759925 7 Gut 0.09 protein_coding synonymous_variant LOW 216C>T Gly72Gly
M0209671 PKENNHKI_00661 759928 5 Gut 0.06 protein_coding synonymous_variant LOW 219T>C Ile73Ile
M0209672 PKENNHKI_00661 759963 8 Gut 0.10 protein_coding missense_variant MODERATE 254G>A Ser85Asn
M0209673 PKENNHKI_00661 759964 6 Gut 0.07 protein_coding synonymous_variant LOW 255T>C Ser85Ser
M0209674 PKENNHKI_00661 759970 3 Gut 0.04 protein_coding synonymous_variant LOW 261C>T Thr87Thr
M0209675 PKENNHKI_00661 759979 4 Gut 0.05 protein_coding synonymous_variant LOW 270T>C Ile90Ile
M0209676 PKENNHKI_00661 759997 4 Gut 0.05 protein_coding synonymous_variant LOW 288T>C Ala96Ala
M0209677 PKENNHKI_00661 760033 9 Gut 0.11 protein_coding synonymous_variant LOW 324T>C Ala108Ala
M0209678 PKENNHKI_00661 760066 4 Gut 0.05 protein_coding synonymous_variant LOW 357C>T Phe119Phe
M0209679 PKENNHKI_00661 760091 6 Gut 0.07 protein_coding missense_variant MODERATE 382A>G Asn128Asp
M0209680 PKENNHKI_00661 760105 9 Gut 0.11 protein_coding synonymous_variant LOW 396T>C Gly132Gly
M0209681 PKENNHKI_00661 760118 10 Gut 0.12 protein_coding missense_variant MODERATE 409G>A Ala137Thr
M0209682 PKENNHKI_00661 760135 10 Gut 0.12 protein_coding synonymous_variant LOW 426C>T Phe142Phe
M0209683 PKENNHKI_00661 760261 7 Gut 0.09 protein_coding synonymous_variant LOW 552C>T Tyr184Tyr
M0209684 PKENNHKI_00661 760318 4 Gut 0.05 protein_coding synonymous_variant LOW 609T>C Ala203Ala
M0209685 PKENNHKI_00661 760396 4 Gut 0.05 protein_coding synonymous_variant LOW 687C>T Asp229Asp
M0209686 PKENNHKI_00661 760765 3 Gut 0.04 protein_coding synonymous_variant LOW 1056C>T Ile352Ile
M0209687 PKENNHKI_00661 760783 5 Gut 0.06 protein_coding synonymous_variant LOW 1074C>G Leu358Leu
M0209688 PKENNHKI_00661 760879 6 Gut 0.07 protein_coding synonymous_variant LOW 1170T>C Asp390Asp
M0209689 PKENNHKI_00661 760921 8 Gut 0.10 protein_coding synonymous_variant LOW 1212A>G Gln404Gln
M0209690 PKENNHKI_00661 760972 4 Gut 0.05 protein_coding synonymous_variant LOW 1263C>T Gly421Gly
M0209691 PKENNHKI_00658 755577 3 Gut 0.04 protein_coding synonymous_variant LOW 1023G>A Glu341Glu
M0209692 PKENNHKI_00658 755811 3 Gut 0.04 protein_coding synonymous_variant LOW 1257G>A Leu419Leu
M0209693 PKENNHKI_00658 755964 8 Gut 0.10 protein_coding synonymous_variant LOW 1410C>T Thr470Thr
M0209694 PKENNHKI_00658 756307 11 Gut 0.13 protein_coding missense_variant MODERATE 1753A>G Lys585Glu
M0209695 PKENNHKI_00656 756404 7 Gut 0.09 protein_coding upstream_gene_variant MODIFIER -3809G>A None
M0209696 PKENNHKI_00659 756650 4 Gut 0.05 protein_coding synonymous_variant LOW 921A>G Leu307Leu
M0209697 PKENNHKI_00659 756653 4 Gut 0.05 protein_coding synonymous_variant LOW 918C>T Gly306Gly
M0209698 PKENNHKI_00659 756656 3 Gut 0.04 protein_coding synonymous_variant LOW 915G>A Ala305Ala
M0209699 PKENNHKI_00659 756743 5 Gut 0.06 protein_coding synonymous_variant LOW 828T>C Leu276Leu
M0209700 PKENNHKI_00659 756749 5 Gut 0.06 protein_coding synonymous_variant LOW 822C>T Asp274Asp
M0209701 PKENNHKI_00659 756752 5 Gut 0.06 protein_coding synonymous_variant LOW 819T>C Asp273Asp
M0209702 PKENNHKI_00659 756755 5 Gut 0.06 protein_coding synonymous_variant LOW 816T>C Phe272Phe
M0209703 PKENNHKI_00659 756773 4 Gut 0.05 protein_coding synonymous_variant LOW 798T>C Asp266Asp
M0209704 PKENNHKI_00659 756776 4 Gut 0.05 protein_coding synonymous_variant LOW 795T>C Asp265Asp
M0209705 PKENNHKI_00659 756788 4 Gut 0.05 protein_coding synonymous_variant LOW 783G>C Leu261Leu
M0209706 PKENNHKI_00659 756791 4 Gut 0.05 protein_coding synonymous_variant LOW 780T>G Gly260Gly
M0209707 PKENNHKI_00659 756794 4 Gut 0.05 protein_coding synonymous_variant LOW 777G>A Lys259Lys
M0209708 PKENNHKI_00659 756887 6 Gut 0.07 protein_coding synonymous_variant LOW 684T>G Ala228Ala
M0209709 PKENNHKI_00659 756959 6 Gut 0.07 protein_coding synonymous_variant LOW 612G>A Ala204Ala
M0209710 PKENNHKI_00659 756965 5 Gut 0.06 protein_coding synonymous_variant LOW 606A>T Arg202Arg
M0209711 PKENNHKI_00659 756971 5 Gut 0.06 protein_coding synonymous_variant LOW 600C>T Gly200Gly
M0209712 PKENNHKI_00659 756980 6 Gut 0.07 protein_coding synonymous_variant LOW 591A>T Arg197Arg
M0209713 PKENNHKI_00659 757013 6 Gut 0.07 protein_coding synonymous_variant LOW 558G>T Ser186Ser
M0209714 PKENNHKI_00659 757016 5 Gut 0.06 protein_coding synonymous_variant LOW 555T>C Val185Val
M0209715 PKENNHKI_00659 757041 4 Gut 0.05 protein_coding missense_variant MODERATE 530A>G His177Arg
M0209716 PKENNHKI_00659 757043 5 Gut 0.06 protein_coding synonymous_variant LOW 528C>T Asn176Asn
M0209717 PKENNHKI_00659 757085 4 Gut 0.05 protein_coding synonymous_variant LOW 486T>C Asp162Asp
M0209718 PKENNHKI_00659 757100 6 Gut 0.07 protein_coding synonymous_variant LOW 471C>T Ser157Ser
M0209719 PKENNHKI_00659 757121 7 Gut 0.09 protein_coding synonymous_variant LOW 450A>G Pro150Pro
M0209720 PKENNHKI_00659 757124 6 Gut 0.07 protein_coding synonymous_variant LOW 447A>G Thr149Thr
M0209721 PKENNHKI_00659 757187 4 Gut 0.05 protein_coding synonymous_variant LOW 384T>C Arg128Arg
M0209722 PKENNHKI_00659 757199 3 Gut 0.04 protein_coding synonymous_variant LOW 372C>T Ile124Ile
M0209723 PKENNHKI_00659 757208 6 Gut 0.07 protein_coding synonymous_variant LOW 363T>C Asp121Asp
M0209724 PKENNHKI_00659 757211 6 Gut 0.07 protein_coding synonymous_variant LOW 360T>C Val120Val
M0209725 PKENNHKI_00659 757214 6 Gut 0.07 protein_coding synonymous_variant LOW 357T>C Pro119Pro
M0209726 PKENNHKI_00659 757217 6 Gut 0.07 protein_coding synonymous_variant LOW 354G>T Leu118Leu
M0209727 PKENNHKI_00659 757232 4 Gut 0.05 protein_coding synonymous_variant LOW 339C>T Arg113Arg
M0209728 PKENNHKI_00659 757241 7 Gut 0.09 protein_coding missense_variant MODERATE 330T>A Asp110Glu
M0209729 PKENNHKI_00659 757265 7 Gut 0.09 protein_coding synonymous_variant LOW 306T>G Ala102Ala
M0209730 PKENNHKI_00659 757268 6 Gut 0.07 protein_coding synonymous_variant LOW 303C>G Arg101Arg
M0209731 PKENNHKI_00659 757277 4 Gut 0.05 protein_coding synonymous_variant LOW 294C>T Ile98Ile
M0209732 PKENNHKI_00659 757289 5 Gut 0.06 protein_coding synonymous_variant LOW 282T>G Ala94Ala
M0209733 PKENNHKI_00659 757305 3 Gut 0.04 protein_coding missense_variant MODERATE 266A>C Glu89Ala
M0209734 PKENNHKI_00659 757358 6 Gut 0.07 protein_coding synonymous_variant LOW 213T>C Phe71Phe
M0209735 PKENNHKI_00659 757363 5 Gut 0.06 protein_coding missense_variant MODERATE 208A>C Met70Leu
M0209736 PKENNHKI_00659 757418 4 Gut 0.05 protein_coding synonymous_variant LOW 153C>G Thr51Thr
M0209737 PKENNHKI_00659 757420 7 Gut 0.09 protein_coding missense_variant MODERATE 151A>G Thr51Ala
M0209738 PKENNHKI_00659 757421 4 Gut 0.05 protein_coding synonymous_variant LOW 150A>G Arg50Arg
M0209739 PKENNHKI_00659 757424 4 Gut 0.05 protein_coding synonymous_variant LOW 147T>C Phe49Phe
M0209740 PKENNHKI_00659 757430 4 Gut 0.05 protein_coding synonymous_variant LOW 141C>T Leu47Leu
M0209741 PKENNHKI_00659 757436 3 Gut 0.04 protein_coding synonymous_variant LOW 135G>A Glu45Glu
M0209742 PKENNHKI_00659 757445 5 Gut 0.06 protein_coding synonymous_variant LOW 126G>T Ala42Ala
M0209743 PKENNHKI_00659 757463 8 Gut 0.10 protein_coding synonymous_variant LOW 108G>A Thr36Thr
M0209744 PKENNHKI_00659 757484 9 Gut 0.11 protein_coding synonymous_variant LOW 87T>C Pro29Pro
M0209745 PKENNHKI_00659 757499 4 Gut 0.05 protein_coding synonymous_variant LOW 72C>T Arg24Arg
M0209746 PKENNHKI_00659 757505 4 Gut 0.05 protein_coding synonymous_variant LOW 66G>T Val22Val
M0209747 PKENNHKI_00659 757534 5 Gut 0.06 protein_coding missense_variant MODERATE 37G>A Val13Ile
M0209748 PKENNHKI_00659 757535 5 Gut 0.06 protein_coding synonymous_variant LOW 36A>G Ala12Ala
M0209749 PKENNHKI_00656 757581 4 Gut 0.05 protein_coding upstream_gene_variant MODIFIER -4986T>C None
M0209750 PKENNHKI_00659 757609 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -39A>G None
M0209751 PKENNHKI_00659 757616 6 Gut 0.07 protein_coding upstream_gene_variant MODIFIER -46A>G None
M0209752 PKENNHKI_00659 757639 5 Gut 0.06 protein_coding upstream_gene_variant MODIFIER -69G>A None
M0209753 PKENNHKI_00659 757640 8 Gut 0.10 protein_coding upstream_gene_variant MODIFIER -70T>C None
M0209754 PKENNHKI_00659 757646 5 Gut 0.06 protein_coding upstream_gene_variant MODIFIER -76G>A None
M0209755 PKENNHKI_00659 757653 7 Gut 0.09 protein_coding upstream_gene_variant MODIFIER -83C>T None
M0209756 PKENNHKI_00659 757661 7 Gut 0.09 protein_coding upstream_gene_variant MODIFIER -91A>G None
M0209757 PKENNHKI_00659 757678 7 Gut 0.09 protein_coding upstream_gene_variant MODIFIER -108A>G None
M0209758 PKENNHKI_00659 757768 12 Gut 0.15 protein_coding upstream_gene_variant MODIFIER -198G>T None
M0209759 PKENNHKI_00659 757769 12 Gut 0.15 protein_coding upstream_gene_variant MODIFIER -199G>C None
M0209760 PKENNHKI_00659 757840 11 Gut 0.13 protein_coding upstream_gene_variant MODIFIER -270G>A None
M0209761 PKENNHKI_00660 757965 4 Gut 0.05 protein_coding synonymous_variant LOW 111C>T Ile37Ile
M0209762 PKENNHKI_00660 757971 6 Gut 0.07 protein_coding synonymous_variant LOW 117T>C Leu39Leu
M0209763 PKENNHKI_00660 757992 6 Gut 0.07 protein_coding synonymous_variant LOW 138G>C Leu46Leu
M0209764 PKENNHKI_00660 757995 5 Gut 0.06 protein_coding synonymous_variant LOW 141C>T Ile47Ile
M0209765 PKENNHKI_00660 758001 12 Gut 0.15 protein_coding synonymous_variant LOW 147G>C Thr49Thr
M0209766 PKENNHKI_00660 758061 11 Gut 0.13 protein_coding synonymous_variant LOW 207C>G Leu69Leu
M0209767 PKENNHKI_00660 758127 10 Gut 0.12 protein_coding synonymous_variant LOW 273A>T Ala91Ala
M0209768 PKENNHKI_00660 758157 11 Gut 0.13 protein_coding synonymous_variant LOW 303A>G Lys101Lys
M0209769 PKENNHKI_00660 758172 11 Gut 0.13 protein_coding synonymous_variant LOW 318T>C Gly106Gly
M0209770 PKENNHKI_00660 758205 10 Gut 0.12 protein_coding synonymous_variant LOW 351T>G Leu117Leu
M0209771 PKENNHKI_00660 758206 10 Gut 0.12 protein_coding synonymous_variant LOW 352T>C Leu118Leu
M0209772 PKENNHKI_00660 758214 9 Gut 0.11 protein_coding synonymous_variant LOW 360C>T Ala120Ala
M0209773 PKENNHKI_00660 758280 6 Gut 0.07 protein_coding synonymous_variant LOW 426T>C Gly142Gly
M0209774 PKENNHKI_00660 758331 10 Gut 0.12 protein_coding synonymous_variant LOW 477T>C Val159Val
M0209775 PKENNHKI_00660 758334 6 Gut 0.07 protein_coding synonymous_variant LOW 480T>C Tyr160Tyr
M0209776 PKENNHKI_00660 758337 7 Gut 0.09 protein_coding synonymous_variant LOW 483G>A Lys161Lys
M0209777 PKENNHKI_00660 758502 6 Gut 0.07 protein_coding synonymous_variant LOW 648C>T Leu216Leu
M0209778 PKENNHKI_00660 758508 6 Gut 0.07 protein_coding synonymous_variant LOW 654G>A Lys218Lys
M0209779 PKENNHKI_00660 758526 7 Gut 0.09 protein_coding synonymous_variant LOW 672T>C Phe224Phe
M0209780 PKENNHKI_00660 758595 4 Gut 0.05 protein_coding synonymous_variant LOW 741C>T Gly247Gly
M0209781 PKENNHKI_00660 758607 4 Gut 0.05 protein_coding synonymous_variant LOW 753C>T Pro251Pro
M0209782 PKENNHKI_00660 758613 3 Gut 0.04 protein_coding synonymous_variant LOW 759C>T Ile253Ile
M0209783 PKENNHKI_00054 47911 4 Gut 0.05 protein_coding synonymous_variant LOW 2730A>G Glu910Glu
M0209784 PKENNHKI_00054 48040 5 Gut 0.06 protein_coding synonymous_variant LOW 2601C>T Arg867Arg
M0209785 PKENNHKI_00054 48043 5 Gut 0.06 protein_coding synonymous_variant LOW 2598C>T Arg866Arg
M0209786 PKENNHKI_00054 48151 7 Gut 0.09 protein_coding synonymous_variant LOW 2490T>C Gly830Gly
M0209787 PKENNHKI_00054 48193 6 Gut 0.07 protein_coding synonymous_variant LOW 2448C>T Ser816Ser
M0209788 PKENNHKI_00054 48199 6 Gut 0.07 protein_coding synonymous_variant LOW 2442T>C Ile814Ile
M0209789 PKENNHKI_00054 48262 4 Gut 0.05 protein_coding synonymous_variant LOW 2379C>T Asp793Asp
M0209790 PKENNHKI_00054 48265 4 Gut 0.05 protein_coding synonymous_variant LOW 2376C>T Asp792Asp
M0209791 PKENNHKI_00054 48283 8 Gut 0.10 protein_coding synonymous_variant LOW 2358A>G Gln786Gln
M0209792 PKENNHKI_00054 48349 5 Gut 0.06 protein_coding synonymous_variant LOW 2292G>A Glu764Glu
M0209793 PKENNHKI_00054 48394 8 Gut 0.10 protein_coding synonymous_variant LOW 2247T>C Ala749Ala
M0209794 PKENNHKI_00054 48421 8 Gut 0.10 protein_coding synonymous_variant LOW 2220T>C Ile740Ile
M0209795 PKENNHKI_00054 48460 5 Gut 0.06 protein_coding synonymous_variant LOW 2181C>G Pro727Pro
M0209796 PKENNHKI_00054 48475 5 Gut 0.06 protein_coding synonymous_variant LOW 2166T>G Val722Val
M0209797 PKENNHKI_00054 48484 8 Gut 0.10 protein_coding synonymous_variant LOW 2157T>C His719His
M0209798 PKENNHKI_00054 48487 5 Gut 0.06 protein_coding synonymous_variant LOW 2154T>C Ile718Ile
M0209799 PKENNHKI_00054 48511 5 Gut 0.06 protein_coding synonymous_variant LOW 2130A>T Ala710Ala
M0209800 PKENNHKI_00054 48562 8 Gut 0.10 protein_coding synonymous_variant LOW 2079T>C Asp693Asp
M0209801 PKENNHKI_00054 48583 5 Gut 0.06 protein_coding synonymous_variant LOW 2058T>C Ile686Ile
M0209802 PKENNHKI_00054 48685 7 Gut 0.09 protein_coding synonymous_variant LOW 1956A>G Glu652Glu
M0209803 PKENNHKI_00054 48745 8 Gut 0.10 protein_coding synonymous_variant LOW 1896A>G Gln632Gln
M0209804 PKENNHKI_00054 48763 3 Gut 0.04 protein_coding synonymous_variant LOW 1878G>A Val626Val
M0209805 PKENNHKI_00054 48766 3 Gut 0.04 protein_coding synonymous_variant LOW 1875C>T Pro625Pro
M0209806 PKENNHKI_00054 48772 3 Gut 0.04 protein_coding synonymous_variant LOW 1869T>C Tyr623Tyr
M0209807 PKENNHKI_00054 48775 3 Gut 0.04 protein_coding synonymous_variant LOW 1866C>T Leu622Leu
M0209808 PKENNHKI_00054 48808 7 Gut 0.09 protein_coding synonymous_variant LOW 1833T>C Val611Val
M0209809 PKENNHKI_00053 47093 3 Gut 0.04 protein_coding synonymous_variant LOW 768T>C Gly256Gly
M0209810 PKENNHKI_00053 47378 3 Gut 0.04 protein_coding synonymous_variant LOW 483A>C Arg161Arg
M0209811 PKENNHKI_00053 47558 4 Gut 0.05 protein_coding synonymous_variant LOW 303T>C Arg101Arg
M0209812 PKENNHKI_00053 47606 3 Gut 0.04 protein_coding synonymous_variant LOW 255G>T Ser85Ser
M0209813 PKENNHKI_00053 47633 6 Gut 0.07 protein_coding synonymous_variant LOW 228T>C Asp76Asp
M0209814 PKENNHKI_00053 47795 6 Gut 0.07 protein_coding synonymous_variant LOW 66A>G Gln22Gln
M0209815 PKENNHKI_00054 48577 6 Gut 0.07 protein_coding synonymous_variant LOW 2064C>T Ile688Ile
M0209816 PKENNHKI_00054 48591 3 Gut 0.04 protein_coding synonymous_variant LOW 2050C>T Leu684Leu
M0209817 PKENNHKI_00054 48655 3 Gut 0.04 protein_coding synonymous_variant LOW 1986C>T Tyr662Tyr
M0209818 PKENNHKI_00054 48664 3 Gut 0.04 protein_coding synonymous_variant LOW 1977C>T Ile659Ile
M0209819 PKENNHKI_00054 48673 3 Gut 0.04 protein_coding synonymous_variant LOW 1968G>T Val656Val
M0209820 PKENNHKI_00054 48679 3 Gut 0.04 protein_coding synonymous_variant LOW 1962C>T Leu654Leu
M0209821 PKENNHKI_00054 48682 3 Gut 0.04 protein_coding synonymous_variant LOW 1959T>C Arg653Arg
M0209822 PKENNHKI_00054 48883 5 Gut 0.06 protein_coding synonymous_variant LOW 1758T>C Asn586Asn
M0209823 PKENNHKI_00054 48922 3 Gut 0.04 protein_coding synonymous_variant LOW 1719C>T Ile573Ile
M0209824 PKENNHKI_00054 48958 3 Gut 0.04 protein_coding synonymous_variant LOW 1683T>C Val561Val
M0209825 PKENNHKI_00054 48961 4 Gut 0.05 protein_coding synonymous_variant LOW 1680T>G Pro560Pro
M0209826 PKENNHKI_00660 758751 13 Gut 0.16 protein_coding synonymous_variant LOW 897C>G Thr299Thr
M0209827 PKENNHKI_00660 758928 9 Gut 0.11 protein_coding synonymous_variant LOW 1074G>A Val358Val
M0209828 PKENNHKI_00660 758994 12 Gut 0.15 protein_coding synonymous_variant LOW 1140C>T Ala380Ala
M0209829 PKENNHKI_00660 759000 13 Gut 0.16 protein_coding synonymous_variant LOW 1146C>T Pro382Pro
M0209830 PKENNHKI_00660 759141 3 Gut 0.04 protein_coding synonymous_variant LOW 1287G>A Glu429Glu
M0209831 PKENNHKI_00660 759194 6 Gut 0.07 protein_coding missense_variant MODERATE 1340A>G Asp447Gly
M0209832 PKENNHKI_00660 759196 6 Gut 0.07 protein_coding missense_variant MODERATE 1342G>A Ala448Thr
M0209833 PKENNHKI_00660 759229 4 Gut 0.05 protein_coding missense_variant MODERATE 1375T>G Ser459Ala
M0209834 PKENNHKI_00660 759315 6 Gut 0.07 protein_coding synonymous_variant LOW 1461T>C Asp487Asp
M0209835 PKENNHKI_00660 759321 7 Gut 0.09 protein_coding synonymous_variant LOW 1467C>T Asp489Asp
M0209836 PKENNHKI_00660 759396 7 Gut 0.09 protein_coding synonymous_variant LOW 1542C>T Ala514Ala
M0209837 PKENNHKI_00660 759399 3 Gut 0.04 protein_coding synonymous_variant LOW 1545G>A Ala515Ala
M0209838 PKENNHKI_00660 759495 7 Gut 0.09 protein_coding synonymous_variant LOW 1641T>C Val547Val
M0209839 PKENNHKI_00661 759910 3 Gut 0.04 protein_coding synonymous_variant LOW 201C>T Arg67Arg
M0209840 PKENNHKI_00661 759991 5 Gut 0.06 protein_coding synonymous_variant LOW 282T>C Gly94Gly
M0209841 PKENNHKI_00661 760204 3 Gut 0.04 protein_coding synonymous_variant LOW 495T>C Ile165Ile
M0209842 PKENNHKI_00661 760210 5 Gut 0.06 protein_coding synonymous_variant LOW 501A>G Ala167Ala
M0209843 PKENNHKI_00372 434325 3 Gut 0.04 protein_coding synonymous_variant LOW 1416T>C Ala472Ala
M0209844 PKENNHKI_00372 434364 3 Gut 0.04 protein_coding synonymous_variant LOW 1377T>C Arg459Arg
M0209845 PKENNHKI_00372 434523 3 Gut 0.04 protein_coding synonymous_variant LOW 1218A>G Thr406Thr
M0209846 PKENNHKI_00372 434615 3 Gut 0.04 protein_coding missense_variant MODERATE 1126A>G Ile376Val
M0209847 PKENNHKI_00372 434703 3 Gut 0.04 protein_coding synonymous_variant LOW 1038A>G Ala346Ala
M0209848 PKENNHKI_00372 434802 3 Gut 0.04 protein_coding synonymous_variant LOW 939T>C Tyr313Tyr
M0209849 PKENNHKI_00659 757343 5 Gut 0.06 protein_coding synonymous_variant LOW 228C>T Gly76Gly
M0209850 PKENNHKI_00659 757447 4 Gut 0.05 protein_coding missense_variant MODERATE 124G>T Ala42Ser
M0209851 PKENNHKI_00659 757526 3 Gut 0.04 protein_coding synonymous_variant LOW 45G>T Ala15Ala
M0209852 PKENNHKI_00659 757544 4 Gut 0.05 protein_coding synonymous_variant LOW 27C>T Asn9Asn
M0209853 PKENNHKI_00659 757599 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -29C>T None
M0209854 PKENNHKI_00659 757688 5 Gut 0.06 protein_coding upstream_gene_variant MODIFIER -118T>A None
M0209855 PKENNHKI_00660 757986 4 Gut 0.05 protein_coding synonymous_variant LOW 132T>C Phe44Phe
M0209856 PKENNHKI_00660 758016 9 Gut 0.11 protein_coding synonymous_variant LOW 162C>T Val54Val
M0209857 PKENNHKI_00660 758184 6 Gut 0.07 protein_coding synonymous_variant LOW 330G>T Val110Val
M0209858 PKENNHKI_00660 758239 9 Gut 0.11 protein_coding missense_variant MODERATE 385G>A Asp129Asn
M0209859 PKENNHKI_00660 758433 3 Gut 0.04 protein_coding synonymous_variant LOW 579C>T Ala193Ala
M0209860 PKENNHKI_00660 758529 5 Gut 0.06 protein_coding synonymous_variant LOW 675C>T Thr225Thr
M0209861 PKENNHKI_00660 758532 5 Gut 0.06 protein_coding synonymous_variant LOW 678T>G Ala226Ala
M0209862 PKENNHKI_00660 758538 4 Gut 0.05 protein_coding synonymous_variant LOW 684A>G Glu228Glu
M0209863 PKENNHKI_00660 758544 3 Gut 0.04 protein_coding synonymous_variant LOW 690T>C Tyr230Tyr
M0209864 PKENNHKI_00660 758547 3 Gut 0.04 protein_coding synonymous_variant LOW 693T>C Pro231Pro
M0209865 PKENNHKI_00660 758550 3 Gut 0.04 protein_coding synonymous_variant LOW 696C>A Gly232Gly
M0209866 PKENNHKI_00660 758553 3 Gut 0.04 protein_coding synonymous_variant LOW 699T>C Leu233Leu
M0209867 PKENNHKI_00660 758562 3 Gut 0.04 protein_coding synonymous_variant LOW 708C>T Ile236Ile
M0209868 PKENNHKI_00660 758724 10 Gut 0.12 protein_coding synonymous_variant LOW 870A>G Val290Val
M0209869 PKENNHKI_00660 758952 8 Gut 0.10 protein_coding synonymous_variant LOW 1098T>C Asp366Asp
M0209870 PKENNHKI_00053 47552 3 Gut 0.04 protein_coding synonymous_variant LOW 309G>T Ser103Ser
M0209871 PKENNHKI_00054 49084 3 Gut 0.04 protein_coding synonymous_variant LOW 1557T>C Thr519Thr
M0209872 PKENNHKI_00054 49093 3 Gut 0.04 protein_coding synonymous_variant LOW 1548T>C Ile516Ile
M0209873 PKENNHKI_00660 758460 8 Gut 0.10 protein_coding synonymous_variant LOW 606G>C Val202Val
M0209874 PKENNHKI_00660 758463 8 Gut 0.10 protein_coding synonymous_variant LOW 609T>C Val203Val
M0209875 PKENNHKI_00660 758682 3 Gut 0.04 protein_coding synonymous_variant LOW 828T>C Gly276Gly
M0209876 PKENNHKI_00660 758850 3 Gut 0.04 protein_coding synonymous_variant LOW 996A>G Glu332Glu
M0209877 PKENNHKI_00660 759042 3 Gut 0.04 protein_coding synonymous_variant LOW 1188C>T Ile396Ile
M0209878 PKENNHKI_00660 759126 3 Gut 0.04 protein_coding synonymous_variant LOW 1272C>T Cys424Cys
M0209879 PKENNHKI_00660 759372 4 Gut 0.05 protein_coding synonymous_variant LOW 1518T>C Leu506Leu
M0209880 PKENNHKI_00660 759585 5 Gut 0.06 protein_coding synonymous_variant LOW 1731T>C Thr577Thr
M0209881 PKENNHKI_00661 759772 3 Gut 0.04 protein_coding synonymous_variant LOW 63G>A Gln21Gln
M0209882 PKENNHKI_00661 759856 6 Gut 0.07 protein_coding synonymous_variant LOW 147T>C Asp49Asp
M0209883 PKENNHKI_00661 759952 3 Gut 0.04 protein_coding synonymous_variant LOW 243C>T Arg81Arg
M0209884 PKENNHKI_00661 760030 3 Gut 0.04 protein_coding missense_variant MODERATE 321A>T Lys107Asn
M0209885 PKENNHKI_00661 760084 3 Gut 0.04 protein_coding synonymous_variant LOW 375T>C Phe125Phe
M0209886 PKENNHKI_00661 760095 3 Gut 0.04 protein_coding missense_variant MODERATE 386G>A Gly129Asp
M0209887 PKENNHKI_00661 760132 3 Gut 0.04 protein_coding synonymous_variant LOW 423C>T Ala141Ala
M0209888 PKENNHKI_00661 760404 5 Gut 0.06 protein_coding missense_variant MODERATE 695A>G Asn232Ser
M0209889 PKENNHKI_00661 760408 5 Gut 0.06 protein_coding synonymous_variant LOW 699C>T Ala233Ala
M0209890 PKENNHKI_00661 760423 4 Gut 0.05 protein_coding synonymous_variant LOW 714A>C Ala238Ala
M0209891 PKENNHKI_00661 760426 4 Gut 0.05 protein_coding synonymous_variant LOW 717T>C Ala239Ala
M0209892 PKENNHKI_00661 760549 3 Gut 0.04 protein_coding synonymous_variant LOW 840C>T Val280Val
M0209893 PKENNHKI_00661 760721 3 Gut 0.04 protein_coding missense_variant MODERATE 1012T>G Ser338Ala
M0209894 PKENNHKI_00661 760741 3 Gut 0.04 protein_coding synonymous_variant LOW 1032A>T Val344Val
M0209895 PKENNHKI_00661 760798 6 Gut 0.07 protein_coding synonymous_variant LOW 1089G>C Leu363Leu
M0209896 PKENNHKI_00661 760891 3 Gut 0.04 protein_coding synonymous_variant LOW 1182C>T Asp394Asp
M0209897 PKENNHKI_00661 760912 3 Gut 0.04 protein_coding synonymous_variant LOW 1203C>T Tyr401Tyr
M0209898 PKENNHKI_00661 760945 3 Gut 0.04 protein_coding synonymous_variant LOW 1236A>G Ala412Ala
M0209899 PKENNHKI_00661 760948 3 Gut 0.04 protein_coding synonymous_variant LOW 1239C>T Ile413Ile
M0209900 PKENNHKI_00661 761020 3 Gut 0.04 protein_coding synonymous_variant LOW 1311T>C Tyr437Tyr
M0209901 PKENNHKI_00661 761026 4 Gut 0.05 protein_coding synonymous_variant LOW 1317A>G Lys439Lys
M0209902 PKENNHKI_00661 761029 4 Gut 0.05 protein_coding synonymous_variant LOW 1320T>C Arg440Arg
M0209903 PKENNHKI_00660 759222 3 Gut 0.04 protein_coding synonymous_variant LOW 1368C>T Ala456Ala
M0209904 PKENNHKI_00660 759324 4 Gut 0.05 protein_coding synonymous_variant LOW 1470C>T Gly490Gly
M0209905 PKENNHKI_00661 759994 3 Gut 0.04 protein_coding synonymous_variant LOW 285C>T Val95Val
M0209906 PKENNHKI_00661 760012 3 Gut 0.04 protein_coding synonymous_variant LOW 303T>C Leu101Leu
M0209907 PKENNHKI_00661 760015 3 Gut 0.04 protein_coding synonymous_variant LOW 306C>T Phe102Phe
M0209908 PKENNHKI_00661 760189 6 Gut 0.07 protein_coding synonymous_variant LOW 480C>T Phe160Phe
M0209909 PKENNHKI_00661 760192 6 Gut 0.07 protein_coding synonymous_variant LOW 483G>C Thr161Thr
M0209910 PKENNHKI_00656 756325 8 Gut 0.10 protein_coding upstream_gene_variant MODIFIER -3730C>T None
M0209911 PKENNHKI_00656 756347 7 Gut 0.09 protein_coding upstream_gene_variant MODIFIER -3752T>A None
M0209912 PKENNHKI_00656 756368 7 Gut 0.09 protein_coding upstream_gene_variant MODIFIER -3773G>A None
M0209913 PKENNHKI_00660 757918 3 Gut 0.04 protein_coding missense_variant MODERATE 64A>G Ile22Val
M0209914 PKENNHKI_00660 757935 4 Gut 0.05 protein_coding synonymous_variant LOW 81C>T Ile27Ile
M0209915 PKENNHKI_00660 758026 3 Gut 0.04 protein_coding synonymous_variant LOW 172C>T Leu58Leu
M0209916 PKENNHKI_00660 758109 5 Gut 0.06 protein_coding synonymous_variant LOW 255C>T Thr85Thr
M0209917 PKENNHKI_00660 758685 4 Gut 0.05 protein_coding synonymous_variant LOW 831C>T Gly277Gly
M0209918 PKENNHKI_00660 759027 4 Gut 0.05 protein_coding synonymous_variant LOW 1173G>A Thr391Thr
M0209919 PKENNHKI_00660 757914 3 Gut 0.04 protein_coding synonymous_variant LOW 60G>A Arg20Arg
M0209920 PKENNHKI_00660 757938 4 Gut 0.05 protein_coding synonymous_variant LOW 84G>A Lys28Lys
M0209921 PKENNHKI_00660 758121 4 Gut 0.05 protein_coding synonymous_variant LOW 267C>T Phe89Phe
M0209922 PKENNHKI_00660 759051 6 Gut 0.07 protein_coding synonymous_variant LOW 1197A>G Val399Val
M0209923 PKENNHKI_00660 759060 4 Gut 0.05 protein_coding synonymous_variant LOW 1206G>A Ala402Ala
M0209924 PKENNHKI_00660 759483 3 Gut 0.04 protein_coding synonymous_variant LOW 1629T>C Leu543Leu
M0209925 PKENNHKI_00560 632067 3 Gut 0.04 protein_coding synonymous_variant LOW 930T>C Ile310Ile
M0209926 PKENNHKI_00560 632100 3 Gut 0.04 protein_coding synonymous_variant LOW 897C>T Ala299Ala
M0209927 PKENNHKI_00560 632175 3 Gut 0.04 protein_coding synonymous_variant LOW 822T>C Val274Val
M0209928 PKENNHKI_00642 739484 4 Gut 0.05 protein_coding upstream_gene_variant MODIFIER -4419A>T None
M0209929 PKENNHKI_00642 739517 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4452G>A None
M0209930 PKENNHKI_00642 739534 4 Gut 0.05 protein_coding upstream_gene_variant MODIFIER -4469T>C None
M0209931 PKENNHKI_00642 739595 4 Gut 0.05 protein_coding upstream_gene_variant MODIFIER -4530A>G None
M0209932 PKENNHKI_00646 739716 3 Gut 0.04 protein_coding missense_variant MODERATE 23C>A Ala8Glu
M0209933 PKENNHKI_00646 739954 3 Gut 0.04 protein_coding synonymous_variant LOW 261A>G Thr87Thr
M0209934 PKENNHKI_00646 740110 4 Gut 0.05 protein_coding synonymous_variant LOW 417T>C Ile139Ile
M0209935 PKENNHKI_00646 740119 4 Gut 0.05 protein_coding synonymous_variant LOW 426T>C Leu142Leu
M0209936 PKENNHKI_00646 740353 3 Gut 0.04 protein_coding synonymous_variant LOW 660C>T Tyr220Tyr
M0209937 PKENNHKI_00646 740466 4 Gut 0.05 protein_coding missense_variant MODERATE 773T>C Val258Ala
M0209938 PKENNHKI_00660 759474 3 Gut 0.04 protein_coding synonymous_variant LOW 1620T>C Val540Val
M0209939 PKENNHKI_00660 759534 4 Gut 0.05 protein_coding synonymous_variant LOW 1680C>T Arg560Arg
M0209940 PKENNHKI_00661 760123 3 Gut 0.04 protein_coding synonymous_variant LOW 414G>C Thr138Thr
M0209941 PKENNHKI_00661 760582 3 Gut 0.04 protein_coding synonymous_variant LOW 873G>A Ala291Ala
M0209942 PKENNHKI_00054 48436 3 Gut 0.04 protein_coding synonymous_variant LOW 2205C>T Leu735Leu
M0209943 PKENNHKI_00054 48565 3 Gut 0.04 protein_coding synonymous_variant LOW 2076G>T Ser692Ser
M0209944 PKENNHKI_00054 48867 3 Gut 0.04 protein_coding synonymous_variant LOW 1774C>T Leu592Leu
M0209945 PKENNHKI_00642 739565 3 Gut 0.04 protein_coding upstream_gene_variant MODIFIER -4500T>G None
M0209946 PKENNHKI_00646 740953 3 Gut 0.04 protein_coding synonymous_variant LOW 1260T>C Asn420Asn
M0209947 PKENNHKI_00659 756659 3 Gut 0.04 protein_coding synonymous_variant LOW 912T>C Val304Val
M0209948 PKENNHKI_00659 757094 3 Gut 0.04 protein_coding synonymous_variant LOW 477C>T Val159Val
M0209949 PKENNHKI_00660 758604 3 Gut 0.04 protein_coding synonymous_variant LOW 750C>T Gly250Gly
M0209950 PKENNHKI_00660 758697 3 Gut 0.04 protein_coding synonymous_variant LOW 843C>T His281His
M0209951 PKENNHKI_00054 48217 3 Gut 0.04 protein_coding synonymous_variant LOW 2424C>A Pro808Pro
M0209952 PKENNHKI_00054 48223 3 Gut 0.04 protein_coding synonymous_variant LOW 2418C>T Ser806Ser
M0209953 PKENNHKI_00660 759555 3 Gut 0.04 protein_coding synonymous_variant LOW 1701C>T Ala567Ala
M0209954 PKENNHKI_00660 759558 3 Gut 0.04 protein_coding synonymous_variant LOW 1704G>C Pro568Pro
M0209955 PKENNHKI_00661 759931 4 Gut 0.05 protein_coding synonymous_variant LOW 222C>T Arg74Arg
M0209956 PKENNHKI_00661 760504 3 Gut 0.04 protein_coding synonymous_variant LOW 795G>A Glu265Glu
M0209957 PKENNHKI_00659 757442 3 Gut 0.04 protein_coding synonymous_variant LOW 129C>A Ala43Ala
M0209958 PKENNHKI_00659 757523 3 Gut 0.04 protein_coding synonymous_variant LOW 48T>C Gly16Gly
M0209959 PKENNHKI_00659 757115 4 Gut 0.05 protein_coding synonymous_variant LOW 456A>G Glu152Glu
M0209960 PKENNHKI_00659 757154 4 Gut 0.05 protein_coding synonymous_variant LOW 417G>T Ala139Ala
M0209961 PKENNHKI_00659 757076 3 Gut 0.04 protein_coding synonymous_variant LOW 495C>T Gly165Gly
M0209962 PKENNHKI_00659 757148 3 Gut 0.04 protein_coding synonymous_variant LOW 423A>G Lys141Lys






Analysis of virulence factors contributing to bacterial pathogenicity


This table presents virulence factors identified within the plasmid cluster.
      Note: Virulence factor analysis was performed using VFDB. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known virulence factors are listed.

Gene Name vf_gene_id vf_name identity evalue qstart qend query_coverage subject_coverage vf_category gene_description condition
PKENNHKI_00508 VFG046465 EF-Tu 71.5 6e-172 1 396 1.0 1.0051 Adherence elongation factor Tu experiment
PKENNHKI_00508 VFG046459 EF-Tu 72 6.9e-172 1 396 1.0 1.0051 Adherence elongation factor Tu prediction







        Analysis of biocide and heavy metal resistance genes to assess antimicrobial risk and environmental impact


This table presents biocides and heavy metals resistance genes identified within the plasmid cluster.
      Note: Analyzing biocide and heavy metal resistance genes based on BacMet to evaluate bacterial resistance risk and the potential impact of environmental heavy metal contamination. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, E-value < 1e-5) to known biocide and heavy metal resistance genes are listed.

Gene Name compound identity evalue qstart qend query_coverage subject_coverage group






        Analyzing antimicrobial resistance genes to assess bacterial resistance to antibiotics and other antimicrobial agents


This table presents antimicrobial resistance genes identified within the plasmid cluster.
      Note: Antimicrobial resistance was performed using CARD. Genes in plasmid clusters showing strong homology (identity > 70%, coverage > 70%, E-value < 1e-5) to known antimicrobial resistance genes are listed.

Gene Name aro_accession identity evalue qstart qend query_coverage subject_coverage drug_class amr_gene_family resistance_mechanism
PKENNHKI_00477 ARO:3003395 72.4 6.53e-59 1 123 0.9840 0.9919 aminoglycoside antibiotic antibiotic-resistant rpsL antibiotic target alteration
PKENNHKI_00508 ARO:3003438 74.2 3.89e-221 1 394 0.9975 0.9338 elfamycin antibiotic elfamycin resistant EF-Tu antibiotic target alteration






Analysis of pathogenicity genes to explore pathogen-host interactions


This table presents host pathogen-host interactions within the plasmid cluster.
      Note: Analyzing pathogenicity-related genes using PHI-base to understand pathogen virulence mechanisms and their impact on host interactions. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e-5) to known pathogenicity-related genes are listed.

Gene Name phi_molconn_id host gene_name identity evalue qstart qend query_coverage subject_coverage host_descripton disease_name function phenotype_of_mutant
PKENNHKI_00508 PHI:10282 tufA 70.5 1.3e-168 1 396 1.0000 1.0000 primates skin infection; food poisoning; respiratory disease elongation factor Tu increased virulence (hypervirulence)






        Analyzing carbohydrate-active enzyme genes to uncover mechanisms of nutrient degradation


This table presents carbohydrate-active enzyme genes identified within the plasmid cluster.
      Note: Annotation of carbohydrate-active enzyme genes was performed using CAZy to explore mechanisms of nutrient breakdown and utilization. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known CAZyme genes are listed.

Gene Name cazy_id identity evalue qstart qend query_coverage subject_coverage
PKENNHKI_00035 UBS35473.1|GT28 96.5 1.62e-309 1 433 1 1
PKENNHKI_00152 UBS35572.1|GT2 99.7 5.98e-238 1 323 1 1
PKENNHKI_00158 ATP53720.1|GT2 96.3 0 1 808 1 0.9818
PKENNHKI_00166 AZH69451.1|GT4 93.7 7e-264 1 381 1 1
PKENNHKI_00169 AZH69448.1|GT2 88.6 2.22e-210 1 315 1 0.9813
PKENNHKI_00175 ATP53732.1|GH25 89.1 2.19e-302 1 577 1 1
PKENNHKI_00184 UBS35593.1|GT2 93.6 0 1 828 1 1
PKENNHKI_00185 ATP53738.1|GT2 95.5 4.62e-249 1 355 1 1
PKENNHKI_00186 QIA33436.1|GT2 98.1 3.83e-277 1 372 1 1
PKENNHKI_00187 UBS35596.1|GT2 96.2 5.93e-236 1 346 1 1
PKENNHKI_00188 UBS35597.1|GT2 96.2 6.19e-260 1 367 1 1
PKENNHKI_00190 QIA33439.1|GT2 99.4 2.6e-256 1 339 1 1
PKENNHKI_00333 QOY61128.1|GH1 79.5 0 4 491 0.9919 0.9959
PKENNHKI_00365 UBS35750.1|GH170 99.4 8.02e-252 1 350 1 1
PKENNHKI_00395 ATP53936.1|GT51 95.7 0 1 650 0.8844 0.8856
PKENNHKI_00489 ATP54019.1|GH13 96.1 0 1 457 0.9978 0.9978
PKENNHKI_00620 UBS35995.1|GH32 96.5 0 1 480 1 1
PKENNHKI_00622 QIA33882.1|GH32 99.1 0 1 460 1 1
PKENNHKI_00655 ATP54168.1|GH1 99.4 0 1 479 1 1
PKENNHKI_00657 QIA33913.1|GH1 99.8 0 1 480 1 1
PKENNHKI_00661 UBS36024.1|GH1 98.7 0 1 473 1 1
PKENNHKI_00682 ATP54184.1|CE9 99.5 4.99e-293 1 389 1 1
PKENNHKI_00713 ATP54210.1|GH1 98.3 0 1 466 1 1
PKENNHKI_00776 UBS36149.1|GH77 99.4 0 1 501 1 1
PKENNHKI_00777 UBS36150.1|GT35 98.9 0 1 755 1 1





        Analyzing transport proteins to understand bacterial strategies for substrate uptake and detoxification


This table presents transport proteins within the plasmid cluster.
      Note: Investigation of transport proteins based on TCDB to uncover bacterial mechanisms of substrate transport and environmental detoxification. Genes in plasmid clusters showing strong homology (identity > 70%, subject coverage > 70%, and E-value < 1e−5) to known transport protein entries are listed.

Gene Name tcid identity evalue qstart qend query_coverage subject_coverage class_field class_term subclass subclass_term family family_term